Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV1g06r
(721 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 33 1.0
AL135793-9|CAI95134.1| 2948|Homo sapiens transforming, acidic co... 32 2.4
AL135793-7|CAI95132.1| 2675|Homo sapiens transforming, acidic co... 32 2.4
AF528099-1|AAO62630.1| 2948|Homo sapiens transforming acidic coi... 32 2.4
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 31 5.5
X74955-1|CAA52910.1| 622|Homo sapiens mucin protein. 31 5.5
AF253321-1|AAF64523.1| 716|Homo sapiens cervical mucin MUC5B pr... 31 5.5
AF094508-1|AAD16120.1| 788|Homo sapiens dentin phosphoryn protein. 30 7.3
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 33.1 bits (72), Expect = 1.0
Identities = 35/144 (24%), Positives = 55/144 (38%), Gaps = 3/144 (2%)
Frame = +3
Query: 138 TAGPTSRPKRLIWRLDLTSPIVIAAPMSLTMMLSARETEAVASATTFSRASPPEAKDLXT 317
T TS P +TS I+AP + T S +T ++S TT + +P +
Sbjct: 748 TTNTTSAPTTSTTSAPITS--TISAPTTSTT--STPQTSTISSPTTSTTPTPQTSTTSSP 803
Query: 318 RLKMRISPSXEPTDAETLGTAX---TXLSRVPT*LTRRXCXELKSSALTSVTRPEKLMMS 488
+P+ T A T T T +S PT T SA T+ T +
Sbjct: 804 TTSTTSAPTTSTTSAPTTSTTSTPQTSISSAPTSSTTSAPTASTISAPTTSTTSFHTTST 863
Query: 489 DAPGGLQEPA*PSRRRGSAALNNS 560
+P + P + SAA +++
Sbjct: 864 TSPPTSSTSSTPQTSKTSAATSST 887
>AL135793-9|CAI95134.1| 2948|Homo sapiens transforming, acidic
coiled-coil containing protein 2 protein.
Length = 2948
Score = 31.9 bits (69), Expect = 2.4
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +3
Query: 135 LTAGPTSRPKRLIWRLDLTSPIVIAAPMSLTM-MLSARETEAVASATTFSRASPPEA 302
L+ PTS P ++W LT ++AP + L + E SR SPP A
Sbjct: 910 LSDTPTSSPTDMVWESSLTEESELSAPTRQKLPALGEKRPEGACGDGQSSRVSPPAA 966
>AL135793-7|CAI95132.1| 2675|Homo sapiens transforming, acidic
coiled-coil containing protein 2 protein.
Length = 2675
Score = 31.9 bits (69), Expect = 2.4
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +3
Query: 135 LTAGPTSRPKRLIWRLDLTSPIVIAAPMSLTM-MLSARETEAVASATTFSRASPPEA 302
L+ PTS P ++W LT ++AP + L + E SR SPP A
Sbjct: 637 LSDTPTSSPTDMVWESSLTEESELSAPTRQKLPALGEKRPEGACGDGQSSRVSPPAA 693
>AF528099-1|AAO62630.1| 2948|Homo sapiens transforming acidic coiled
coil 2, long isoform protein.
Length = 2948
Score = 31.9 bits (69), Expect = 2.4
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +3
Query: 135 LTAGPTSRPKRLIWRLDLTSPIVIAAPMSLTM-MLSARETEAVASATTFSRASPPEA 302
L+ PTS P ++W LT ++AP + L + E SR SPP A
Sbjct: 910 LSDTPTSSPTDMVWESSLTEESELSAPTRQKLPALGEKRPEGACGDGQSSRVSPPAA 966
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 30.7 bits (66), Expect = 5.5
Identities = 25/80 (31%), Positives = 36/80 (45%)
Frame = +3
Query: 225 TMMLSARETEAVASATTFSRASPPEAKDLXTRLKMRISPSXEPTDAETLGTAXTXLSRVP 404
T +L+ T A +A+T S A+P K+ SP+ PT + T+ + R
Sbjct: 2864 TWILTELTTTATTTASTGSTATPSSTPGTAPPPKVLTSPATTPTATSSKATSSSS-PRTA 2922
Query: 405 T*LTRRXCXELKSSALTSVT 464
T L KS+A TSVT
Sbjct: 2923 TTLPVLTSTATKSTA-TSVT 2941
>X74955-1|CAA52910.1| 622|Homo sapiens mucin protein.
Length = 622
Score = 30.7 bits (66), Expect = 5.5
Identities = 25/80 (31%), Positives = 36/80 (45%)
Frame = +3
Query: 225 TMMLSARETEAVASATTFSRASPPEAKDLXTRLKMRISPSXEPTDAETLGTAXTXLSRVP 404
T +L+ T A +A+T S A+P K+ SP+ PT + T+ + R
Sbjct: 78 TWILTELTTTATTTASTGSTATPSSTPGTAPPPKVLTSPATTPTATSSKATSSSS-PRTA 136
Query: 405 T*LTRRXCXELKSSALTSVT 464
T L KS+A TSVT
Sbjct: 137 TTLPVLTTTATKSTA-TSVT 155
>AF253321-1|AAF64523.1| 716|Homo sapiens cervical mucin MUC5B
protein.
Length = 716
Score = 30.7 bits (66), Expect = 5.5
Identities = 25/80 (31%), Positives = 36/80 (45%)
Frame = +3
Query: 225 TMMLSARETEAVASATTFSRASPPEAKDLXTRLKMRISPSXEPTDAETLGTAXTXLSRVP 404
T +L+ T A +A+T S A+P K+ SP+ PT + T+ + R
Sbjct: 338 TWILTELTTTATTTASTGSTATPSSTPGTAPPPKVLTSPATTPTATSSKATSSSS-PRTA 396
Query: 405 T*LTRRXCXELKSSALTSVT 464
T L KS+A TSVT
Sbjct: 397 TTLPVLTSTATKSTA-TSVT 415
>AF094508-1|AAD16120.1| 788|Homo sapiens dentin phosphoryn protein.
Length = 788
Score = 30.3 bits (65), Expect = 7.3
Identities = 26/108 (24%), Positives = 50/108 (46%)
Frame = +2
Query: 146 SNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSERPXDAAE 325
S S+ D + + D ++S SSD +DN + S + S+ SS S D++
Sbjct: 165 SKSESDSSDSDSKSDSSDSN-SSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSN 223
Query: 326 NADFSFXGTD*C*NSGNSQX*XESGADVADTTXMXGAEVISLDVSHAA 469
++D S +D +S +S S +D +D++ + D S+++
Sbjct: 224 SSD-SSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSS 270
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,839,980
Number of Sequences: 237096
Number of extensions: 1447950
Number of successful extensions: 3946
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3945
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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