Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV1f19r
         (876 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC032221-1|AAH32221.1|  583|Homo sapiens KIAA0391 protein.            157   4e-38
AB002389-1|BAA20845.2|  571|Homo sapiens KIAA0391 protein.            157   4e-38
BC044580-1|AAH44580.1|  583|Homo sapiens KIAA0391 protein.            155   2e-37
BC053647-1|AAH53647.1|  570|Homo sapiens FERM domain containing ...    31   7.2  

>BC032221-1|AAH32221.1|  583|Homo sapiens KIAA0391 protein.
          Length = 583

 Score =  157 bits (382), Expect = 4e-38
 Identities = 84/244 (34%), Positives = 139/244 (56%), Gaps = 4/244 (1%)
 Frame = -2

Query: 800  NGRCQSCSKTLDCLKLSDEEFKTLQSNIKDKLIIGSDLFLKTSPQELEKFLNFIEKTGPY 621
            +G+C  C KT++ ++LS EE++ L+  I   +I G D + KT+PQEL++F NFI+   P+
Sbjct: 345  SGQCSGCGKTIESIQLSPEEYECLKGKIMRDVIDGGDQYRKTTPQELKRFENFIKSRPPF 404

Query: 620  DIILDALNVSYSIGKQSQATGAKALHIVVEYFLNQNKKVLILGRKHILT----WKKNLIG 453
            D+++D LNV+    K  ++   + L  VV     +N ++L+LGRKH+L     W ++ + 
Sbjct: 405  DVVIDGLNVAKMFPKVRES---QLLLNVVSQLAKRNLRLLVLGRKHMLRRSSQWSRDEME 461

Query: 452  DMLSKTSSFFTDNLSQDDPYIITAAIFSGSHTDIVSKDLLRGHIFKLQDEYLRILFKRWQ 273
            ++  + S FF D++S+DDP+++ A + SG+H   +++DL+R H   L D   + LF +WQ
Sbjct: 462  EVQKQASCFFADDISEDDPFLLYATLHSGNHCRFITRDLMRDHKACLPDAKTQRLFFKWQ 521

Query: 272  WQHQWMLFKTNNKHGLRIQPPLVFTPCPQKNNNSWHLPYKGEDEELGLNIVNDGTPNLNN 93
              HQ  +        L  Q  L +    Q   +SWH+PY   DE+L +   +   P    
Sbjct: 522  QGHQLAIVNRFPGSKLTFQRILSYDTVVQTTGDSWHIPY---DEDL-VERCSCEVP--TK 575

Query: 92   WLCL 81
            WLCL
Sbjct: 576  WLCL 579


>AB002389-1|BAA20845.2|  571|Homo sapiens KIAA0391 protein.
          Length = 571

 Score =  157 bits (382), Expect = 4e-38
 Identities = 84/244 (34%), Positives = 139/244 (56%), Gaps = 4/244 (1%)
 Frame = -2

Query: 800  NGRCQSCSKTLDCLKLSDEEFKTLQSNIKDKLIIGSDLFLKTSPQELEKFLNFIEKTGPY 621
            +G+C  C KT++ ++LS EE++ L+  I   +I G D + KT+PQEL++F NFI+   P+
Sbjct: 333  SGQCSGCGKTIESIQLSPEEYECLKGKIMRDVIDGGDQYRKTTPQELKRFENFIKSRPPF 392

Query: 620  DIILDALNVSYSIGKQSQATGAKALHIVVEYFLNQNKKVLILGRKHILT----WKKNLIG 453
            D+++D LNV+    K  ++   + L  VV     +N ++L+LGRKH+L     W ++ + 
Sbjct: 393  DVVIDGLNVAKMFPKVRES---QLLLNVVSQLAKRNLRLLVLGRKHMLRRSSQWSRDEME 449

Query: 452  DMLSKTSSFFTDNLSQDDPYIITAAIFSGSHTDIVSKDLLRGHIFKLQDEYLRILFKRWQ 273
            ++  + S FF D++S+DDP+++ A + SG+H   +++DL+R H   L D   + LF +WQ
Sbjct: 450  EVQKQASCFFADDISEDDPFLLYATLHSGNHCRFITRDLMRDHKACLPDAKTQRLFFKWQ 509

Query: 272  WQHQWMLFKTNNKHGLRIQPPLVFTPCPQKNNNSWHLPYKGEDEELGLNIVNDGTPNLNN 93
              HQ  +        L  Q  L +    Q   +SWH+PY   DE+L +   +   P    
Sbjct: 510  QGHQLAIVNRFPGSKLTFQRILSYDTVVQTTGDSWHIPY---DEDL-VERCSCEVP--TK 563

Query: 92   WLCL 81
            WLCL
Sbjct: 564  WLCL 567


>BC044580-1|AAH44580.1|  583|Homo sapiens KIAA0391 protein.
          Length = 583

 Score =  155 bits (377), Expect = 2e-37
 Identities = 83/244 (34%), Positives = 139/244 (56%), Gaps = 4/244 (1%)
 Frame = -2

Query: 800  NGRCQSCSKTLDCLKLSDEEFKTLQSNIKDKLIIGSDLFLKTSPQELEKFLNFIEKTGPY 621
            +G+C  C KT++ ++LS EE++ L+  I   +I G D + KT+PQEL++F NFI+   P+
Sbjct: 345  SGQCSGCGKTIESIQLSPEEYECLKGKIMRDVIDGGDQYRKTTPQELKRFENFIKSRPPF 404

Query: 620  DIILDALNVSYSIGKQSQATGAKALHIVVEYFLNQNKKVLILGRKHILT----WKKNLIG 453
            D+++D LNV+    K  ++   + L  VV     ++ ++L+LGRKH+L     W ++ + 
Sbjct: 405  DVVIDGLNVAKMFPKVRES---QLLLNVVSQLAKRSLRLLVLGRKHMLRRSSQWSRDEME 461

Query: 452  DMLSKTSSFFTDNLSQDDPYIITAAIFSGSHTDIVSKDLLRGHIFKLQDEYLRILFKRWQ 273
            ++  + S FF D++S+DDP+++ A + SG+H   +++DL+R H   L D   + LF +WQ
Sbjct: 462  EVQKQASCFFADDISEDDPFLLYATLHSGNHCRFITRDLMRDHKACLPDAKTQRLFFKWQ 521

Query: 272  WQHQWMLFKTNNKHGLRIQPPLVFTPCPQKNNNSWHLPYKGEDEELGLNIVNDGTPNLNN 93
              HQ  +        L  Q  L +    Q   +SWH+PY   DE+L +   +   P    
Sbjct: 522  QGHQLAIVNRFPGSKLTFQRILSYDTVVQTTGDSWHIPY---DEDL-VERCSCEVP--TK 575

Query: 92   WLCL 81
            WLCL
Sbjct: 576  WLCL 579


>BC053647-1|AAH53647.1|  570|Homo sapiens FERM domain containing 5
           protein.
          Length = 570

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = -2

Query: 341 DLLRGHIFKLQDEYLRILFKRWQWQHQWMLFKTNNKHGLRIQPPLVFTPC 192
           DLL  H+  L+ +Y  I F     Q  W+ F  +    LR QPP  FT C
Sbjct: 44  DLLCHHLNLLEKDYFGIRFVDPDKQRHWLEFTKSVVKQLRSQPP--FTMC 91


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,082,179
Number of Sequences: 237096
Number of extensions: 2750581
Number of successful extensions: 5239
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5233
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)