Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV1f19f
         (671 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    25   0.56 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   6.9  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   6.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.9  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   6.9  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 25.0 bits (52), Expect = 0.56
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = -2

Query: 475 FLCTINFRRTPSKFFSLMFPLSKSMFFFNSFQLNELFSSSDSKYAI 338
           F  +++F +   K   L+  L   +FFF+SF  + LFS   S++ +
Sbjct: 74  FCASLSFYKA-FKIGILLNQLITPLFFFHSFMTSVLFSQVASRWPL 118


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 604  KEKHLYLKHIETYTK 648
            KE HL + +++TYT+
Sbjct: 1057 KEHHLKISNLKTYTQ 1071


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/23 (30%), Positives = 17/23 (73%)
 Frame = -3

Query: 585 LLTFHNRALEVHLLHLKIVLHFF 517
           +++ ++++   + +H+KIVL FF
Sbjct: 48  VVSIYSKSFHRNEIHIKIVLMFF 70


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 13/44 (29%), Positives = 17/44 (38%)
 Frame = -3

Query: 648 FCISLYXXXXXXXXXXXLIYFLLTFHNRALEVHLLHLKIVLHFF 517
           F + +Y           + YF   F      VHLL L  + HFF
Sbjct: 129 FLLCIYYFVVPLFFLLCIYYFYCAFI--IFTVHLLFLLCIYHFF 170



 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 555 VHLLHLKIVLHFFYLY 508
           VHLL L  + +F+Y++
Sbjct: 250 VHLLLLVCIYYFYYMH 265


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -1

Query: 347 ICYLTAYTFNWC 312
           +CY T  T +WC
Sbjct: 318 VCYSTIGTVSWC 329


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,150
Number of Sequences: 336
Number of extensions: 3166
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)