Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV1f19f
         (671 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M59501-1|AAA28994.1|  462|Drosophila melanogaster tube protein p...    31   1.9  
AY061215-1|AAL28763.1|  462|Drosophila melanogaster LD16174p pro...    31   1.9  
AE014297-74|AAF52136.3|  462|Drosophila melanogaster CG10520-PA ...    31   1.9  
BT024221-1|ABC86283.1| 1241|Drosophila melanogaster RE04053p pro...    29   7.6  
BT009938-1|AAQ22407.1|  698|Drosophila melanogaster SD07232p pro...    29   7.6  
AE014298-1113|AAF46314.1| 1241|Drosophila melanogaster CG2253-PA...    29   7.6  

>M59501-1|AAA28994.1|  462|Drosophila melanogaster tube protein
           protein.
          Length = 462

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
 Frame = +3

Query: 417 GNINEKNFEGVLLKFMVQRKKFDAANSFVC--YINKKNEELSL---GAINGLLMLYYEMS 581
           G +NE+   GVLL+ +VQ + F AA+ FV   ++N+      +   GA+  L +L  EM 
Sbjct: 121 GKLNERPTVGVLLQLLVQAELFSAAD-FVALDFLNESTPARPVDGPGALISLELLEEEME 179

Query: 582 KENK 593
            +N+
Sbjct: 180 VDNE 183


>AY061215-1|AAL28763.1|  462|Drosophila melanogaster LD16174p
           protein.
          Length = 462

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
 Frame = +3

Query: 417 GNINEKNFEGVLLKFMVQRKKFDAANSFVC--YINKKNEELSL---GAINGLLMLYYEMS 581
           G +NE+   GVLL+ +VQ + F AA+ FV   ++N+      +   GA+  L +L  EM 
Sbjct: 121 GKLNERPTVGVLLQLLVQAELFSAAD-FVALDFLNESTPARPVDGPGALISLELLEEEME 179

Query: 582 KENK 593
            +N+
Sbjct: 180 VDNE 183


>AE014297-74|AAF52136.3|  462|Drosophila melanogaster CG10520-PA
           protein.
          Length = 462

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
 Frame = +3

Query: 417 GNINEKNFEGVLLKFMVQRKKFDAANSFVC--YINKKNEELSL---GAINGLLMLYYEMS 581
           G +NE+   GVLL+ +VQ + F AA+ FV   ++N+      +   GA+  L +L  EM 
Sbjct: 121 GKLNERPTVGVLLQLLVQAELFSAAD-FVALDFLNESTPARPVDGPGALISLELLEEEME 179

Query: 582 KENK 593
            +N+
Sbjct: 180 VDNE 183


>BT024221-1|ABC86283.1| 1241|Drosophila melanogaster RE04053p
           protein.
          Length = 1241

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 20/59 (33%), Positives = 30/59 (50%)
 Frame = +3

Query: 312 APIKCVSSQIAYLESELEKSSFNWNELKKNILFERGNINEKNFEGVLLKFMVQRKKFDA 488
           A +   ++ +A   +EL +  F W+  KKN L     +    F G L+KF +  KKFDA
Sbjct: 570 AIVHMCNTDVATDLAELLRKEFKWHIHKKNQLNIETKLKIVRFIGELVKFGL-FKKFDA 627


>BT009938-1|AAQ22407.1|  698|Drosophila melanogaster SD07232p
           protein.
          Length = 698

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 20/59 (33%), Positives = 30/59 (50%)
 Frame = +3

Query: 312 APIKCVSSQIAYLESELEKSSFNWNELKKNILFERGNINEKNFEGVLLKFMVQRKKFDA 488
           A +   ++ +A   +EL +  F W+  KKN L     +    F G L+KF +  KKFDA
Sbjct: 570 AIVHMCNTDVATDLAELLRKEFKWHIHKKNQLNIETKLKIVRFIGELVKFGL-FKKFDA 627


>AE014298-1113|AAF46314.1| 1241|Drosophila melanogaster CG2253-PA
           protein.
          Length = 1241

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 20/59 (33%), Positives = 30/59 (50%)
 Frame = +3

Query: 312 APIKCVSSQIAYLESELEKSSFNWNELKKNILFERGNINEKNFEGVLLKFMVQRKKFDA 488
           A +   ++ +A   +EL +  F W+  KKN L     +    F G L+KF +  KKFDA
Sbjct: 570 AIVHMCNTDVATDLAELLRKEFKWHIHKKNQLNIETKLKIVRFIGELVKFGL-FKKFDA 627


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,678,756
Number of Sequences: 53049
Number of extensions: 470196
Number of successful extensions: 1051
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)