Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV1f16f
         (599 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.0  
AF265299-1|AAG17642.1|   63|Tribolium castaneum putative cytochr...    21   6.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   7.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = -1

Query: 269 LITICQHFCCFFKSLQHILL-CSNNHFNVSLI 177
           L+ I   FC F     H+L  C+   FN+ L+
Sbjct: 163 LLCIYHFFCAFIIFTMHLLFCCAFIFFNMHLL 194


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 11/51 (21%), Positives = 25/51 (49%)
 Frame = +3

Query: 282  RLRAASTEFKKHTQLLFEMRKDLEFIFKKIRAIKTKLSSQYPEAYKEAVAE 434
            +L+  + E++  T++  EMRK +  + +     + K      EA++  V +
Sbjct: 1350 KLKGINNEYEDQTEVPVEMRKTVSNLAQTSGGGENKPIFYLDEAFQRRVTQ 1400


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 11/51 (21%), Positives = 25/51 (49%)
 Frame = +3

Query: 282  RLRAASTEFKKHTQLLFEMRKDLEFIFKKIRAIKTKLSSQYPEAYKEAVAE 434
            +L+  + E++  T++  EMRK +  + +     + K      EA++  V +
Sbjct: 1350 KLKGINNEYEDQTEVPVEMRKTVSNLAQTSGGGENKPIFYLDEAFQRRVTQ 1400


>AF265299-1|AAG17642.1|   63|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 63

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 408 EAYKEAVAESLANRKPLVDDEDLK 479
           +AY+E VA     +KP+V   DL+
Sbjct: 21  KAYEEQVALFGKEKKPIVSYSDLQ 44


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short
          gastrulation protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 5/15 (33%), Positives = 10/15 (66%)
 Frame = -2

Query: 97 GVPFAIIYCFRTQYI 53
          GVP  ++YC + + +
Sbjct: 54 GVPIGVLYCMKCECV 68


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,729
Number of Sequences: 336
Number of extensions: 2986
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)