Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV1f16f
         (599 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    25   1.4  
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            25   1.4  
AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein prot...    24   3.3  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    24   3.3  
AY334007-1|AAR01132.1|  202|Anopheles gambiae odorant receptor 1...    24   4.3  
AY334006-1|AAR01131.1|  202|Anopheles gambiae odorant receptor 1...    24   4.3  
AY334005-1|AAR01130.1|  202|Anopheles gambiae odorant receptor 1...    24   4.3  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   10.0 

>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = +3

Query: 348 LEFIFKKIRAIKTKLSSQYPEAYKEAVAESLANRKPLVDDEDLKPSEEKPE 500
           LE  F +   +  K  S      +  + ++ A R     D+DL+P E  PE
Sbjct: 234 LEVTFSERTFVTPKRESMEQAEQEWTLKQAAARRAVGFADDDLRPDERNPE 284


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = +3

Query: 348 LEFIFKKIRAIKTKLSSQYPEAYKEAVAESLANRKPLVDDEDLKPSEEKPE 500
           LE  F +   +  K  S      +  + ++ A R     D+DL+P E  PE
Sbjct: 234 LEVTFSERTFVTPKRESMEQAEQEWTLKQAAARRAVGFADDDLRPDERNPE 284


>AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein
           protein.
          Length = 385

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
 Frame = +3

Query: 87  NGTPESDFSIECFQNYTAPEVFV-QGLAGMVDQTDVE-VIIRAQKNMLQRFEKTTEMLTN 260
           NGT  +D+S  C Q  T     + Q +A + D  + +    +  ++ L+RF  T   L N
Sbjct: 45  NGTAPADWSASCTQRRTEDHAKIEQAVAVIKDHLEKQAAATKPIRDELRRFGGTLLPLLN 104

Query: 261 CNQL 272
             Q+
Sbjct: 105 SAQV 108


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 345 DLEFIFKKIRAIKTKLSSQYPEAYKEAV 428
           DLE + + IR + TK   ++P+A  E V
Sbjct: 849 DLEALERTIRVVSTKHQMRHPKASVERV 876


>AY334007-1|AAR01132.1|  202|Anopheles gambiae odorant receptor 1
           protein.
          Length = 202

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 114 SRNHFLEYRSPLFIVFVHNTLYLYTNFLIF 25
           +RN ++ Y   L IVF+H  LY  T  L F
Sbjct: 7   TRNRYIAYGWALRIVFLH--LYALTQALYF 34


>AY334006-1|AAR01131.1|  202|Anopheles gambiae odorant receptor 1
           protein.
          Length = 202

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 114 SRNHFLEYRSPLFIVFVHNTLYLYTNFLIF 25
           +RN ++ Y   L IVF+H  LY  T  L F
Sbjct: 7   TRNRYIAYGWALRIVFLH--LYALTQALYF 34


>AY334005-1|AAR01130.1|  202|Anopheles gambiae odorant receptor 1
           protein.
          Length = 202

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 114 SRNHFLEYRSPLFIVFVHNTLYLYTNFLIF 25
           +RN ++ Y   L IVF+H  LY  T  L F
Sbjct: 7   TRNRYIAYGWALRIVFLH--LYALTQALYF 34


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +2

Query: 89  RYSRK*FLDRMLPELH 136
           R S+K F DRML  LH
Sbjct: 340 RASKKQFFDRMLQALH 355


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,899
Number of Sequences: 2352
Number of extensions: 12518
Number of successful extensions: 35
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)