Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV1f15f
         (683 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   5.1  
DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    24   5.1  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    24   5.1  
AY280613-1|AAQ21366.1|  257|Anopheles gambiae carbonic anhydrase...    23   9.0  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -1

Query: 656 VPREPSRLSGIHNVLFVHPIGVSIVYDSGDTVIRKLNSLI 537
           +P    R S + N L   P  +S+ Y+   T  RKLNS++
Sbjct: 252 LPSSLFRASRVRNELPSAPNSLSVRYNFRLTDYRKLNSIL 291


>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +1

Query: 13  RFKPTASSFFCNPPYYKKKWS 75
           RF+ TA   F NP Y+K+ WS
Sbjct: 464 RFRYTAWIKF-NPDYFKRDWS 483


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -3

Query: 540 DSCSRVGNKRCC*AHRRGSVHRRRC 466
           D CS  G  +C      G+ H +RC
Sbjct: 510 DECSNAGTYKCGICECDGTYHGQRC 534


>AY280613-1|AAQ21366.1|  257|Anopheles gambiae carbonic anhydrase
           alternate isoform protein.
          Length = 257

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +3

Query: 537 NQAIQLTNDGIPGVIYNGHTDWVYEEDVMYTGQA 638
           NQ   +  DGI  + Y GH D + +  ++ TG +
Sbjct: 16  NQRSTVIRDGIQPLDYFGHWDGLGKAKMVNTGSS 49


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 799,264
Number of Sequences: 2352
Number of extensions: 17779
Number of successful extensions: 130
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 130
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)