Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV1f12f
         (608 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   2.0  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   4.6  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   4.6  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   6.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.1  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   6.1  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   6.1  
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    21   8.1  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   8.1  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -2

Query: 346 FLIMF*IHYVIFFEMKFHIIKCRFGINQNLYGINNNPKIVLIQFIGKF 203
           +LI+F I +  F+ MK      RFG          +   +L++F+  F
Sbjct: 359 YLILFSIGFNCFWVMKLLYNVLRFGAESQTINFMFSFGFILLRFLSVF 406


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 269 NPKSTFYYMKFHFKKNYIMNLKHY 340
           NP+  +YY K H      +N ++Y
Sbjct: 354 NPQQQYYYNKNHPNSENYINHQNY 377


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 269 NPKSTFYYMKFHFKKNYIMNLKHY 340
           NP+  +YY K H      +N ++Y
Sbjct: 302 NPQQQYYYNKNHPNSENYINHQNY 325


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 368 VDPLK*LFFNNVLNSLCNFF 309
           V+ L  LF N++L+ +C+ F
Sbjct: 195 VNALDHLFLNDILSDICDKF 214


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -3

Query: 552 WNYMNKYVICIFNSSX*YKS 493
           W++    ++ IFNS+  YK+
Sbjct: 162 WSFSTGLLVMIFNSALSYKA 181


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 5/21 (23%), Positives = 14/21 (66%)
 Frame = -1

Query: 158 HFQLKVNFFFWLNLLIRCIFF 96
           HF L   +F++  +++ C+++
Sbjct: 95  HFLLCTYYFYYAFIILLCVYY 115


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 368 VDPLK*LFFNNVLNSLCNFF 309
           V+ L  LF N++L+ +C+ F
Sbjct: 151 VNALDHLFLNDILSDICDKF 170


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -3

Query: 552 WNYMNKYVICIFNSSX*YKS 493
           W++    ++ IFNS+  YK+
Sbjct: 180 WSFSTGLLVMIFNSALSYKA 199


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
           acetylcholinesterase protein.
          Length = 50

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -1

Query: 509 PYNINLSHRGIDKDKDIVKXLVLVKIYG 426
           P  + + H G    ++  K  VLV IYG
Sbjct: 21  PQRLRIRHHGDKPPQERPKVPVLVWIYG 48


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +1

Query: 514 IKNTNHIFIHIIPQGTPYILIPFIVII 594
           IKNT      + P+   Y ++ F+V++
Sbjct: 79  IKNTEPGMFRVAPELLGYSVVVFVVVM 105


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,759
Number of Sequences: 336
Number of extensions: 1628
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)