Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV1e24f
         (702 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    24   1.4  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    24   1.4  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    24   1.4  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   3.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   3.2  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   3.2  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   7.4  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   9.7  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 234 LLSYNSV*ASPLILTCMPRTFFWTIKNIF 148
           L+ YN V A  L    +  TF W   ++F
Sbjct: 205 LMDYNIVMALVLQFITLQHTFIWVFNDVF 233


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 234 LLSYNSV*ASPLILTCMPRTFFWTIKNIF 148
           L+ YN V A  L    +  TF W   ++F
Sbjct: 205 LMDYNIVMALVLQFITLQHTFIWVFNDVF 233


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 234 LLSYNSV*ASPLILTCMPRTFFWTIKNIF 148
           L+ YN V A  L    +  TF W   ++F
Sbjct: 205 LMDYNIVMALVLQFITLQHTFIWVFNDVF 233


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 6/26 (23%), Positives = 16/26 (61%)
 Frame = +1

Query: 76  KEANIYLDNQWNTYYAGQTVNGRIEY 153
           K  ++Y  +QW  + + + ++ ++EY
Sbjct: 320 KNTHMYKGDQWVAFDSPKAISNKVEY 345


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 532 IQIQCIYYCKCHLGFL 485
           +Q+   Y+C C LGF+
Sbjct: 316 VQLVNDYHCNCKLGFM 331


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 430 MFPFKR*RQDRWQ 392
           +FPF R  Q RWQ
Sbjct: 173 LFPFYRQNQQRWQ 185


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -1

Query: 453 LTVYLT*PCSPSKDEGRTGGNVQVK 379
           LT Y T   SPS  E   GG   V+
Sbjct: 1   LTPYFTQSTSPSASEAFPGGRTLVE 25


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 176 LFFGLSKTYSILPF 135
           L+ G S TY +LPF
Sbjct: 416 LYNGRSYTYQVLPF 429


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,356
Number of Sequences: 336
Number of extensions: 4403
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)