Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV1e23f
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22181-1|CAA80179.1| 710|Caenorhabditis elegans Hypothetical pr... 63 2e-10
Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical p... 32 0.42
Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical p... 32 0.42
Z46267-12|CAD45595.2| 528|Caenorhabditis elegans Hypothetical p... 32 0.42
Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical p... 32 0.42
Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical p... 32 0.42
Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical pr... 32 0.42
Z70037-3|CAC42352.1| 902|Caenorhabditis elegans Hypothetical pr... 31 0.98
Z70037-2|CAA93879.2| 906|Caenorhabditis elegans Hypothetical pr... 31 0.98
D84668-1|BAA86913.1| 902|Caenorhabditis elegans CLH-1 protein. 31 0.98
AF173170-1|AAF13163.1| 868|Caenorhabditis elegans CLC chloride ... 31 0.98
Z81117-9|CAB03317.2| 333|Caenorhabditis elegans Hypothetical pr... 29 3.0
U88308-4|AAB42323.1| 299|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical pr... 28 5.2
AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical... 28 5.2
Z81117-3|CAB03318.1| 334|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical pr... 28 6.9
AF038614-2|AAB92061.2| 321|Caenorhabditis elegans Serpentine re... 28 6.9
Z81562-2|CAB04559.1| 331|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z75527-8|CAA99778.2| 316|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z19158-2|CAA79571.3| 262|Caenorhabditis elegans Hypothetical pr... 27 9.1
U41991-1|AAA83341.2| 1400|Caenorhabditis elegans Rna polymerase,... 27 9.1
>Z22181-1|CAA80179.1| 710|Caenorhabditis elegans Hypothetical
protein ZK632.2 protein.
Length = 710
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/93 (33%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Frame = +2
Query: 407 YKEPKWSGLCPDGSDYALEVIKSGIITDKVDLTGKP---YHVFGRFT-NCDIIMAHPTVS 574
Y+ P W+ + E++K G + DL+ + + V GR CD++M HP++S
Sbjct: 68 YEVPPWACEPDPAHKFQFEILKEGKLIASYDLSNRKNSTFVVIGRIKPGCDLLMEHPSIS 127
Query: 575 RHHAVLQY--KAFAEEGEPVCGWYLYDLGSTHG 667
R+H +LQY ++ G+ GW++++LGSTHG
Sbjct: 128 RYHCILQYGNDKMSKTGK---GWHIFELGSTHG 157
>Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical
protein F49E2.5j protein.
Length = 1100
Score = 31.9 bits (69), Expect = 0.42
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 185 ENKTPSPQNEEKIEFKKPVLFGRVGKLPKKVKNESEKVIEEPKDETPA 328
E+ PQ E+ +E P + K K+ESEK +EEP P+
Sbjct: 398 ESAPAPPQVEQVVETTPPASENKKKNKKDKKKSESEKAVEEPVQAAPS 445
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 272 KVKNESEKVIEEPKDETPAXXXXXXXXXXXXPPPAHKKE 388
K K+ESEKV E+P + PA P +KK+
Sbjct: 384 KKKSESEKVTEQPVESAPAPPQVEQVVETTPPASENKKK 422
>Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5i protein.
Length = 1030
Score = 31.9 bits (69), Expect = 0.42
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 185 ENKTPSPQNEEKIEFKKPVLFGRVGKLPKKVKNESEKVIEEPKDETPA 328
E+ PQ E+ +E P + K K+ESEK +EEP P+
Sbjct: 398 ESAPAPPQVEQVVETTPPASENKKKNKKDKKKSESEKAVEEPVQAAPS 445
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 272 KVKNESEKVIEEPKDETPAXXXXXXXXXXXXPPPAHKKE 388
K K+ESEKV E+P + PA P +KK+
Sbjct: 384 KKKSESEKVTEQPVESAPAPPQVEQVVETTPPASENKKK 422
>Z46267-12|CAD45595.2| 528|Caenorhabditis elegans Hypothetical
protein F49E2.5g protein.
Length = 528
Score = 31.9 bits (69), Expect = 0.42
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 185 ENKTPSPQNEEKIEFKKPVLFGRVGKLPKKVKNESEKVIEEPKDETPA 328
E+ PQ E+ +E P + K K+ESEK +EEP P+
Sbjct: 315 ESAPAPPQVEQVVETTPPASENKKKNKKDKKKSESEKAVEEPVQAAPS 362
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 272 KVKNESEKVIEEPKDETPAXXXXXXXXXXXXPPPAHKKE 388
K K+ESEKV E+P + PA P +KK+
Sbjct: 301 KKKSESEKVTEQPVESAPAPPQVEQVVETTPPASENKKK 339
>Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical
protein F49E2.5f protein.
Length = 611
Score = 31.9 bits (69), Expect = 0.42
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 185 ENKTPSPQNEEKIEFKKPVLFGRVGKLPKKVKNESEKVIEEPKDETPA 328
E+ PQ E+ +E P + K K+ESEK +EEP P+
Sbjct: 398 ESAPAPPQVEQVVETTPPASENKKKNKKDKKKSESEKAVEEPVQAAPS 445
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 272 KVKNESEKVIEEPKDETPAXXXXXXXXXXXXPPPAHKKE 388
K K+ESEKV E+P + PA P +KK+
Sbjct: 384 KKKSESEKVTEQPVESAPAPPQVEQVVETTPPASENKKK 422
>Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical
protein F49E2.5e protein.
Length = 581
Score = 31.9 bits (69), Expect = 0.42
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 185 ENKTPSPQNEEKIEFKKPVLFGRVGKLPKKVKNESEKVIEEPKDETPA 328
E+ PQ E+ +E P + K K+ESEK +EEP P+
Sbjct: 398 ESAPAPPQVEQVVETTPPASENKKKNKKDKKKSESEKAVEEPVQAAPS 445
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 272 KVKNESEKVIEEPKDETPAXXXXXXXXXXXXPPPAHKKE 388
K K+ESEKV E+P + PA P +KK+
Sbjct: 384 KKKSESEKVTEQPVESAPAPPQVEQVVETTPPASENKKK 422
>Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical
protein F49E2.5a protein.
Length = 1215
Score = 31.9 bits (69), Expect = 0.42
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 185 ENKTPSPQNEEKIEFKKPVLFGRVGKLPKKVKNESEKVIEEPKDETPA 328
E+ PQ E+ +E P + K K+ESEK +EEP P+
Sbjct: 398 ESAPAPPQVEQVVETTPPASENKKKNKKDKKKSESEKAVEEPVQAAPS 445
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 272 KVKNESEKVIEEPKDETPAXXXXXXXXXXXXPPPAHKKE 388
K K+ESEKV E+P + PA P +KK+
Sbjct: 384 KKKSESEKVTEQPVESAPAPPQVEQVVETTPPASENKKK 422
>Z70037-3|CAC42352.1| 902|Caenorhabditis elegans Hypothetical
protein T27D12.2b protein.
Length = 902
Score = 30.7 bits (66), Expect = 0.98
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = -3
Query: 237 GFLNSIFSSFCGLGVLFSAILKCKLEYLIQYI*FMLRKCNIF--HFAFCIGLYYLIYLCV 64
GF+ +IFS F +G+ EYLI + FML F + AFC ++Y+ L V
Sbjct: 132 GFITAIFSIFIDMGI----------EYLIHFRNFMLESLEQFNNYAAFCGWVFYITGL-V 180
Query: 63 YLRTL 49
YL L
Sbjct: 181 YLAAL 185
>Z70037-2|CAA93879.2| 906|Caenorhabditis elegans Hypothetical
protein T27D12.2a protein.
Length = 906
Score = 30.7 bits (66), Expect = 0.98
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = -3
Query: 237 GFLNSIFSSFCGLGVLFSAILKCKLEYLIQYI*FMLRKCNIF--HFAFCIGLYYLIYLCV 64
GF+ +IFS F +G+ EYLI + FML F + AFC ++Y+ L V
Sbjct: 132 GFITAIFSIFIDMGI----------EYLIHFRNFMLESLEQFNNYAAFCGWVFYITGL-V 180
Query: 63 YLRTL 49
YL L
Sbjct: 181 YLAAL 185
>D84668-1|BAA86913.1| 902|Caenorhabditis elegans CLH-1 protein.
Length = 902
Score = 30.7 bits (66), Expect = 0.98
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = -3
Query: 237 GFLNSIFSSFCGLGVLFSAILKCKLEYLIQYI*FMLRKCNIF--HFAFCIGLYYLIYLCV 64
GF+ +IFS F +G+ EYLI + FML F + AFC ++Y+ L V
Sbjct: 132 GFITAIFSIFIDMGI----------EYLIHFRNFMLESLEQFNNYAAFCGWVFYITGL-V 180
Query: 63 YLRTL 49
YL L
Sbjct: 181 YLAAL 185
>AF173170-1|AAF13163.1| 868|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 868
Score = 30.7 bits (66), Expect = 0.98
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = -3
Query: 237 GFLNSIFSSFCGLGVLFSAILKCKLEYLIQYI*FMLRKCNIF--HFAFCIGLYYLIYLCV 64
GF+ +IFS F +G+ EYLI + FML F + AFC ++Y+ L V
Sbjct: 94 GFITAIFSIFIDMGI----------EYLIHFRNFMLESLEQFNNYAAFCGWVFYITGL-V 142
Query: 63 YLRTL 49
YL L
Sbjct: 143 YLAAL 147
>Z81117-9|CAB03317.2| 333|Caenorhabditis elegans Hypothetical
protein T06E6.8 protein.
Length = 333
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 416 ALYKVSESNLLSCGPAAVWILLKCFQ*YFRPV 321
ALY S + L+C V+IL CF Y+ P+
Sbjct: 237 ALYAQSGAFFLTCFTPYVYILYSCFTNYYNPI 268
>U88308-4|AAB42323.1| 299|Caenorhabditis elegans Hypothetical
protein C32E8.5 protein.
Length = 299
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Frame = +2
Query: 545 DIIMAHPTVSRHHAVLQYKAF---AEEGEPV--CGWYLYDLGSTHG 667
DI + HP+ S+ HAVLQ+++ ++G Y+ DLGS +G
Sbjct: 198 DIPVDHPSCSKQHAVLQFRSMPFTRDDGTKARRIMPYIIDLGSGNG 243
>Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical protein
Y37A1B.1a protein.
Length = 1222
Score = 28.3 bits (60), Expect = 5.2
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +2
Query: 149 CIKYSSLHFKMAENKTPSPQNEEKIEFKKPVLFGRVGKLPKKVKNES-EKVIEEPKDETP 325
C +++ F + E P P +E E K + K KV +S EK EEP E P
Sbjct: 1131 CKRHADRIFSVVEKVMPPPPKKE--EKSKKDEKEKTDKKDDKVSEKSAEKSTEEPSQEVP 1188
Query: 326 A 328
A
Sbjct: 1189 A 1189
>AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 28.3 bits (60), Expect = 5.2
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +2
Query: 149 CIKYSSLHFKMAENKTPSPQNEEKIEFKKPVLFGRVGKLPKKVKNES-EKVIEEPKDETP 325
C +++ F + E P P +E E K + K KV +S EK EEP E P
Sbjct: 1131 CKRHADRIFSVVEKVMPPPPKKE--EKSKKDEKEKTDKKDDKVSEKSAEKSTEEPSQEVP 1188
Query: 326 A 328
A
Sbjct: 1189 A 1189
>Z81117-3|CAB03318.1| 334|Caenorhabditis elegans Hypothetical
protein T06E6.9 protein.
Length = 334
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 416 ALYKVSESNLLSCGPAAVWILLKCFQ*YFRPV 321
ALY S + L+C V++L CF Y+ P+
Sbjct: 237 ALYAQSGAFFLTCFTPYVYMLYSCFTNYYNPI 268
>Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical
protein C33D9.8 protein.
Length = 604
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +2
Query: 179 MAENKTPSPQNEEKIEFKKPVLFGRVGKLPKKVKNESEKVIEEPKDETPA 328
+A K NE K++F++ + V L + ++ SEKV EE DET A
Sbjct: 488 IATGKNARKWNEMKVQFER--IDNIVNGLEARYQSMSEKVNEEISDETIA 535
>AF038614-2|AAB92061.2| 321|Caenorhabditis elegans Serpentine
receptor, class v protein4 protein.
Length = 321
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = -3
Query: 117 IFHFAFCIGLYYLIYLCVYLRTLFVLNYLQVSIHKSSF 4
I H F ++ ++L YLR L++++ L+ ++ KSSF
Sbjct: 12 ISHLIFIPICWFSVFL--YLRVLYIIHQLRKNVFKSSF 47
>Z81562-2|CAB04559.1| 331|Caenorhabditis elegans Hypothetical
protein K03D7.4 protein.
Length = 331
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 413 LYKVSESNLLSCGPAAVWILLKCFQ*YFRPV 321
LY S + L+C V+IL CF Y+ P+
Sbjct: 236 LYAQSGAFFLACFTPYVYILYSCFTNYYNPI 266
>Z75527-8|CAA99778.2| 316|Caenorhabditis elegans Hypothetical
protein C15C8.6 protein.
Length = 316
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = -2
Query: 112 SLCVLYWFILFNLFMCLPSNFICIELFTS 26
++C L+++I+F+LF C +IC+ +S
Sbjct: 228 TICSLFFYIIFDLFFCF---WICMSFLSS 253
>Z19158-2|CAA79571.3| 262|Caenorhabditis elegans Hypothetical
protein T23G5.3 protein.
Length = 262
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 653 PNHISTNRTRAPLLPRTLYIVKP 585
PN I T + P++PR L + KP
Sbjct: 119 PNQILTQKENVPIVPRNLLLSKP 141
>U41991-1|AAA83341.2| 1400|Caenorhabditis elegans Rna polymerase,
class iii (c) protein1 protein.
Length = 1400
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/30 (33%), Positives = 22/30 (73%)
Frame = +3
Query: 24 KLVNNSIQIKFEGKHINRLNSINQYRTQSE 113
+++ IQ KF+GK+++ + +++Y TQ+E
Sbjct: 943 EVLKAEIQKKFKGKYVHFADKLSEYITQTE 972
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,230,493
Number of Sequences: 27780
Number of extensions: 321477
Number of successful extensions: 891
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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