Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV1e20f
(704 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subu... 31 0.035
AY146756-1|AAO12071.1| 282|Anopheles gambiae odorant-binding pr... 25 1.8
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 25 3.1
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 25 3.1
AY578805-1|AAT07310.1| 753|Anopheles gambiae medea protein. 24 4.1
AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin s... 24 4.1
AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein. 24 5.4
AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein. 24 5.4
AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein. 24 5.4
AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein. 24 5.4
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 23 7.1
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 23 7.1
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 23 7.1
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 23 7.1
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 23 7.1
AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-spe... 23 7.1
AF008575-1|AAB87764.1| 525|Anopheles gambiae chitinase protein. 23 9.4
>AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subunit
protein.
Length = 837
Score = 31.1 bits (67), Expect = 0.035
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = +2
Query: 485 CV-GRCSCCSGWPGCACSPGLLQSLYAHPSAARPNPGHGT 601
CV G+C C GW G AC P GHGT
Sbjct: 611 CVCGQCECREGWTGPACDCRASNETCMPPGGGELCSGHGT 650
>AY146756-1|AAO12071.1| 282|Anopheles gambiae odorant-binding
protein AgamOBP40 protein.
Length = 282
Score = 25.4 bits (53), Expect = 1.8
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 601 RTMSWVRAGRTWV 563
RTM W+R+G WV
Sbjct: 270 RTMCWIRSGAIWV 282
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 24.6 bits (51), Expect = 3.1
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 442 EEVLKYADDPFWVNLRWSLFVLF-WVAWLCMLAGAIAVIVRAP 567
E+ K +D W + L LF W+ L +LAG +I++AP
Sbjct: 488 EDSTKVKED--WKYVAMVLDRLFLWIFTLAVLAGTAGIILQAP 528
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 24.6 bits (51), Expect = 3.1
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 442 EEVLKYADDPFWVNLRWSLFVLF-WVAWLCMLAGAIAVIVRAP 567
E+ K +D W + L LF W+ L +LAG +I++AP
Sbjct: 488 EDSTKVKED--WKYVAMVLDRLFLWIFTLAVLAGTAGIILQAP 528
>AY578805-1|AAT07310.1| 753|Anopheles gambiae medea protein.
Length = 753
Score = 24.2 bits (50), Expect = 4.1
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -3
Query: 558 YNDCNSPGEHAQPGHPEQHEQRPTQVHPEG 469
Y P HA H +Q Q+ +Q P G
Sbjct: 453 YTQSIQPPAHASGSHQQQASQQQSQYWPHG 482
>AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin
subunit AgBnu protein.
Length = 803
Score = 24.2 bits (50), Expect = 4.1
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = +2
Query: 491 GRCSCCSGWPGCACSPGLLQS 553
G+C C GW G C L S
Sbjct: 490 GQCQCYVGWIGKTCECNLQNS 510
Score = 23.8 bits (49), Expect = 5.4
Identities = 10/20 (50%), Positives = 11/20 (55%), Gaps = 2/20 (10%)
Frame = +2
Query: 482 TCVGRCSCCSGWPG--CACS 535
TC G CSC W G C C+
Sbjct: 579 TC-GTCSCFDSWSGDNCECT 597
>AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 23.8 bits (49), Expect = 5.4
Identities = 10/20 (50%), Positives = 11/20 (55%), Gaps = 2/20 (10%)
Frame = +2
Query: 482 TCVGRCSCCSGWPG--CACS 535
TC G CSC W G C C+
Sbjct: 3 TC-GTCSCFDSWSGDNCECT 21
>AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 23.8 bits (49), Expect = 5.4
Identities = 10/20 (50%), Positives = 11/20 (55%), Gaps = 2/20 (10%)
Frame = +2
Query: 482 TCVGRCSCCSGWPG--CACS 535
TC G CSC W G C C+
Sbjct: 3 TC-GTCSCFDSWSGDNCECT 21
>AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 23.8 bits (49), Expect = 5.4
Identities = 10/20 (50%), Positives = 11/20 (55%), Gaps = 2/20 (10%)
Frame = +2
Query: 482 TCVGRCSCCSGWPG--CACS 535
TC G CSC W G C C+
Sbjct: 3 TC-GTCSCFDSWSGDNCECT 21
>AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 23.8 bits (49), Expect = 5.4
Identities = 10/20 (50%), Positives = 11/20 (55%), Gaps = 2/20 (10%)
Frame = +2
Query: 482 TCVGRCSCCSGWPG--CACS 535
TC G CSC W G C C+
Sbjct: 3 TC-GTCSCFDSWSGDNCECT 21
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 23.4 bits (48), Expect = 7.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 531 HAQPGHPEQHEQRPTQVHP 475
H Q HP H+Q+ +Q HP
Sbjct: 254 HQQQQHPSSHQQQ-SQQHP 271
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 23.4 bits (48), Expect = 7.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 531 HAQPGHPEQHEQRPTQVHP 475
H Q HP H+Q+ +Q HP
Sbjct: 254 HQQQQHPSSHQQQ-SQQHP 271
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 23.4 bits (48), Expect = 7.1
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -3
Query: 525 QPGHPEQHEQRPTQVHPEGIVSILQYLLSRHPSELPF 415
QP PE+ + R E I S LQ L S++PF
Sbjct: 1021 QPNAPEEEKIRYRNESYEKINSELQELYRNITSQIPF 1057
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 23.4 bits (48), Expect = 7.1
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -3
Query: 525 QPGHPEQHEQRPTQVHPEGIVSILQYLLSRHPSELPF 415
QP PE+ + R E I S LQ L S++PF
Sbjct: 1022 QPNAPEEEKIRYRNESYEKINSELQELYRNITSQIPF 1058
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 23.4 bits (48), Expect = 7.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 531 HAQPGHPEQHEQRPTQVHP 475
H Q HP H+Q+ +Q HP
Sbjct: 206 HQQQQHPSSHQQQ-SQQHP 223
>AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless
male-specific zinc-fingerC isoform protein.
Length = 569
Score = 23.4 bits (48), Expect = 7.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 531 HAQPGHPEQHEQRPTQVHP 475
H Q HP H+Q+ +Q HP
Sbjct: 254 HQQQQHPSSHQQQ-SQQHP 271
>AF008575-1|AAB87764.1| 525|Anopheles gambiae chitinase protein.
Length = 525
Score = 23.0 bits (47), Expect = 9.4
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = -2
Query: 409 HRVQSSRHHSCGPRRHISHRTCPPGL*FWPRL 314
H +R++ C TCPPG F P L
Sbjct: 480 HPTNCARYYICLTADTYYEFTCPPGTLFDPAL 511
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 752,440
Number of Sequences: 2352
Number of extensions: 16428
Number of successful extensions: 49
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -