Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV1e20f
(704 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-7|CAB02316.2| 613|Caenorhabditis elegans Hypothetical pr... 76 2e-14
Z93375-4|CAB07562.2| 647|Caenorhabditis elegans Hypothetical pr... 51 7e-07
AF068718-4|AAC17765.1| 98|Caenorhabditis elegans Hypothetical ... 35 0.049
Z79603-2|CAB01893.4| 500|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF068709-8|AAO26015.1| 315|Caenorhabditis elegans Serpentine re... 31 1.1
U41022-1|AAA82338.3| 303|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z92833-9|CAD54141.2| 665|Caenorhabditis elegans Hypothetical pr... 30 1.9
AL023842-11|CAD54168.2| 665|Caenorhabditis elegans Hypothetical... 30 1.9
Z68760-13|CAD30434.1| 423|Caenorhabditis elegans Hypothetical p... 29 3.2
AL032641-7|CAD30455.1| 423|Caenorhabditis elegans Hypothetical ... 29 3.2
AF068709-7|AAO26014.1| 317|Caenorhabditis elegans Serpentine re... 29 4.3
Z68009-1|CAA92003.1| 1095|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical pr... 28 5.7
AF036704-3|AAB88559.2| 503|Caenorhabditis elegans Hypothetical ... 28 5.7
U41015-4|AAA82313.1| 317|Caenorhabditis elegans Hypothetical pr... 28 7.5
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 28 7.5
Z81581-4|CAB04663.2| 568|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z81568-15|CAB04595.2| 610|Caenorhabditis elegans Hypothetical p... 27 9.9
Z81568-14|CAB04591.2| 608|Caenorhabditis elegans Hypothetical p... 27 9.9
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z70680-8|CAA94570.2| 349|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z68315-13|CAA92676.1| 148|Caenorhabditis elegans Hypothetical p... 27 9.9
U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1 prepropro... 27 9.9
AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical... 27 9.9
>Z80223-7|CAB02316.2| 613|Caenorhabditis elegans Hypothetical
protein F26D10.9a protein.
Length = 613
Score = 76.2 bits (179), Expect = 2e-14
Identities = 29/58 (50%), Positives = 43/58 (74%)
Frame = +1
Query: 430 GMTREEVLKYADDPFWVNLRWSLFVLFWVAWLCMLAGAIAVIVRAPKCGPPEPRTWYE 603
G+T+E++ KY +DPFW +R LFVLFW+AW+ M AGAIA++V +PKC + W++
Sbjct: 43 GLTKEQLEKYRNDPFWKPVRTILFVLFWLAWVLMFAGAIAIVVLSPKCAEKQKPDWWQ 100
>Z93375-4|CAB07562.2| 647|Caenorhabditis elegans Hypothetical
protein C38C6.2 protein.
Length = 647
Score = 51.2 bits (117), Expect = 7e-07
Identities = 20/58 (34%), Positives = 35/58 (60%)
Frame = +1
Query: 430 GMTREEVLKYADDPFWVNLRWSLFVLFWVAWLCMLAGAIAVIVRAPKCGPPEPRTWYE 603
G++ +E+ ++ +DP W +R LFVLFW+ WL + A AI ++ +P C W++
Sbjct: 78 GLSEQELEQFRNDPCWKFIRTVLFVLFWLIWLALFAVAILLVCFSPTCVLRAKPNWWQ 135
>AF068718-4|AAC17765.1| 98|Caenorhabditis elegans Hypothetical
protein R01B10.3 protein.
Length = 98
Score = 35.1 bits (77), Expect = 0.049
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 430 GMTREEVLKYADDPFWVNLRWSLFVLFWVAWLCMLAGAIAVIV 558
G + +E+ ++P W R++ +FW W +LAG+I +IV
Sbjct: 35 GYSLDELNAKREEPKWRVARYTAIAMFWGIWGALLAGSILIIV 77
>Z79603-2|CAB01893.4| 500|Caenorhabditis elegans Hypothetical
protein M163.2 protein.
Length = 500
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -3
Query: 594 CPGFGRAALGCAYNDCNSPGEHAQPGHPEQHEQR 493
C FG A CAY D +S +H + HPE H +
Sbjct: 351 CCDFGSCA--CAYTDPSSLRKHVKSKHPEHHAMK 382
>AF068709-8|AAO26015.1| 315|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 59 protein.
Length = 315
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -3
Query: 288 AVGRYLLLRFAEVRFGRPEFCIRFWYSLVGCNVFILFHLPSI 163
+V R L + FA +F R FC R WY +G ++F+ HLP +
Sbjct: 120 SVHRILTVMFAG-KFER--FCYR-WYPAIGISMFVYSHLPKL 157
>U41022-1|AAA82338.3| 303|Caenorhabditis elegans Hypothetical
protein K08B5.2 protein.
Length = 303
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -3
Query: 474 EGIVSILQYLLSRHPSELPFISIEFNLRVTIPVVPDDIFRIGHVHP 337
E + +LQYLL + +FN+R++ P +P I + HP
Sbjct: 184 ETVSKVLQYLLENEIYLTKCVKAKFNVRLSSPDIPHLIMKFIECHP 229
>Z92833-9|CAD54141.2| 665|Caenorhabditis elegans Hypothetical
protein F38A6.3d protein.
Length = 665
Score = 29.9 bits (64), Expect = 1.9
Identities = 25/103 (24%), Positives = 39/103 (37%), Gaps = 3/103 (2%)
Frame = -3
Query: 636 IDQVQSDQGTEFVPCPGFGR---AALGCAYNDCNSPGEHAQPGHPEQHEQRPTQVHPEGI 466
I+ D TE + G L YN+ + G E+H + T G
Sbjct: 436 IEDCDMDSDTESIEDSGLAPEFDVDLAPIYNEKMEVDGEDEDGGEEEHVRTATMTFCNGF 495
Query: 465 VSILQYLLSRHPSELPFISIEFNLRVTIPVVPDDIFRIGHVHP 337
+ Q L RH + S + N R+++P+ P I H+ P
Sbjct: 496 FATSQALRRRHATGQRTASGQPNRRISVPLWPRRTSWIRHLVP 538
>AL023842-11|CAD54168.2| 665|Caenorhabditis elegans Hypothetical
protein F38A6.3d protein.
Length = 665
Score = 29.9 bits (64), Expect = 1.9
Identities = 25/103 (24%), Positives = 39/103 (37%), Gaps = 3/103 (2%)
Frame = -3
Query: 636 IDQVQSDQGTEFVPCPGFGR---AALGCAYNDCNSPGEHAQPGHPEQHEQRPTQVHPEGI 466
I+ D TE + G L YN+ + G E+H + T G
Sbjct: 436 IEDCDMDSDTESIEDSGLAPEFDVDLAPIYNEKMEVDGEDEDGGEEEHVRTATMTFCNGF 495
Query: 465 VSILQYLLSRHPSELPFISIEFNLRVTIPVVPDDIFRIGHVHP 337
+ Q L RH + S + N R+++P+ P I H+ P
Sbjct: 496 FATSQALRRRHATGQRTASGQPNRRISVPLWPRRTSWIRHLVP 538
>Z68760-13|CAD30434.1| 423|Caenorhabditis elegans Hypothetical
protein F36H1.4c protein.
Length = 423
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 488 VGRCSCCSGWPGCACSPGLLQSLYAHPSAARPNPGHGTNSVP 613
V C C GW G C +Q+ YA P R N T+++P
Sbjct: 179 VPSCHCPQGWEGTRCDRHYVQAFYA-PINGRYNQS-STSAIP 218
>AL032641-7|CAD30455.1| 423|Caenorhabditis elegans Hypothetical
protein F36H1.4c protein.
Length = 423
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 488 VGRCSCCSGWPGCACSPGLLQSLYAHPSAARPNPGHGTNSVP 613
V C C GW G C +Q+ YA P R N T+++P
Sbjct: 179 VPSCHCPQGWEGTRCDRHYVQAFYA-PINGRYNQS-STSAIP 218
>AF068709-7|AAO26014.1| 317|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 60 protein.
Length = 317
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -3
Query: 231 FCIRFWYSLVGCNVFILFHLPSI 163
FC R WY +G ++F+ HLP +
Sbjct: 136 FCYR-WYPAIGISMFVYSHLPKL 157
>Z68009-1|CAA92003.1| 1095|Caenorhabditis elegans Hypothetical protein
R09A8.1 protein.
Length = 1095
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = -1
Query: 560 RTMTAIAPASMHSQATQNNTNSDQRKFTQKGSSAYFSTSSLVIPVNCRLLASSSIFAS 387
RT +A+ A + ++ SD+ F+Q+ + + T + +P+ L +SSSI A+
Sbjct: 848 RTKSAVTTAC--TSTSKQAARSDEPFFSQRDTRQHSYTQRVQVPIGAALHSSSSIAAN 903
>Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical
protein ZC373.7 protein.
Length = 297
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -2
Query: 250 SFWTTGILYQILV*PCRLQRVHPLSLALHQSRDGFSVAP 134
S WT + QILV P RV+P + Q R FS P
Sbjct: 53 SAWTEMMDIQILVTPPTKPRVNPFNSVFRQKRQTFSGLP 91
>AF036704-3|AAB88559.2| 503|Caenorhabditis elegans Hypothetical
protein ZK185.2 protein.
Length = 503
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = -2
Query: 151 GFSVAPTSLIVYYTLKTSFSLRESSPFTINHDLQIAVQGTNVLGLC 14
G SV + ++ ++PFTI+ L A+Q T +L +C
Sbjct: 397 GISVPSNIIFIFIIFLFGVGFHNTTPFTISFVLVCAIQVTTLLYIC 442
>U41015-4|AAA82313.1| 317|Caenorhabditis elegans Hypothetical
protein F20B6.5 protein.
Length = 317
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +2
Query: 233 SGRPKRTSANRRRRYLPTAPKRNY*RRKT 319
+GR KR+S +R+R+ P P+R+ + KT
Sbjct: 195 TGREKRSSEDRKRQVPPEEPRRSSHQSKT 223
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
Frame = -3
Query: 540 PGEHAQPGHPEQHEQR---PTQVHPE 472
P + QP HP QH+Q P Q HP+
Sbjct: 520 PQQQQQPQHPHQHQQPASVPMQHHPQ 545
>Z81581-4|CAB04663.2| 568|Caenorhabditis elegans Hypothetical
protein T02E1.2 protein.
Length = 568
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 163 DGGQVKEDEHVATYKAIPESDTE 231
DG V+EDE + ++ +P DTE
Sbjct: 123 DGNPVEEDEEMPAHEDLPSEDTE 145
>Z81568-15|CAB04595.2| 610|Caenorhabditis elegans Hypothetical
protein K08E3.3b protein.
Length = 610
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -2
Query: 310 SSIVSLRRRRQISSPSICRGSF 245
S+ LRRR +ISSP I R SF
Sbjct: 509 STPTPLRRRAEISSPKILRSSF 530
>Z81568-14|CAB04591.2| 608|Caenorhabditis elegans Hypothetical
protein K08E3.3a protein.
Length = 608
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -2
Query: 310 SSIVSLRRRRQISSPSICRGSF 245
S+ LRRR +ISSP I R SF
Sbjct: 509 STPTPLRRRAEISSPKILRSSF 530
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical
protein T01D3.7 protein.
Length = 2882
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/31 (38%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = +2
Query: 497 CSCCSGWPGCACS-PGLLQSLYAHPSAARPN 586
C C GW G CS P L + H +PN
Sbjct: 811 CLCNDGWSGSDCSIPRCLTNCTGHGKCIQPN 841
>Z70680-8|CAA94570.2| 349|Caenorhabditis elegans Hypothetical
protein C25G4.7 protein.
Length = 349
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3
Query: 510 EQHEQRPTQVHPEGIVSILQYLLSRHPSELPFISIEFNLRV 388
++H Q P + E + I Y +HP LP +EF LR+
Sbjct: 57 QEHPQNPEEPVVEKVFRISLYPAGQHP--LPVQKVEFKLRL 95
>Z68315-13|CAA92676.1| 148|Caenorhabditis elegans Hypothetical
protein F28C6.10 protein.
Length = 148
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 593 VLGSGGPHLGARTMTAIAPASMHSQATQNNTNSDQRKFTQKG 468
V GS + + + +AP S +Q + N+T S + T+KG
Sbjct: 35 VSGSEDVKVSLESKSTVAPTSSVTQKSSNSTESPETDSTEKG 76
>U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1
preproprotein protein.
Length = 1042
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 482 TCVGRCSCCSGWPGCAC 532
T RC C +GW G AC
Sbjct: 682 TTTARCVCFNGWSGVAC 698
>AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical
protein Y37D8A.13 protein.
Length = 1042
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 482 TCVGRCSCCSGWPGCAC 532
T RC C +GW G AC
Sbjct: 682 TTTARCVCFNGWSGVAC 698
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,500,190
Number of Sequences: 27780
Number of extensions: 376269
Number of successful extensions: 1438
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1438
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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