Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV1e18f
(641 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 23 2.5
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 22 4.4
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 22 4.4
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 22 4.4
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 22 4.4
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 22 4.4
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 22 4.4
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 22 4.4
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 4.4
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 4.4
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 4.4
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 4.4
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 4.4
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 4.4
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 4.4
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 4.4
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 22 4.4
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 22 5.8
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.8
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.8
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.8
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.8
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.8
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.8
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 5.8
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 5.8
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 21 7.7
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -2
Query: 307 RSGGTRSVQCCSLEPQYPC*RYHQT 233
++G +Q L+P+YP R H+T
Sbjct: 333 KAGSKHLLQNTWLDPEYPMIRVHKT 357
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 4.4
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +3
Query: 294 VPPERGLYPGCEFGYRPW*SSGIKIPGSVH 383
VP G +P RPW ++PGS H
Sbjct: 92 VPVYYGNFPPRPIMVRPWVPMRGQVPGSRH 121
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 4.4
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +3
Query: 294 VPPERGLYPGCEFGYRPW*SSGIKIPGSVH 383
VP G +P RPW ++PGS H
Sbjct: 92 VPVYYGNFPPRPIMVRPWVPMRGQVPGSRH 121
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 4.4
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +3
Query: 294 VPPERGLYPGCEFGYRPW*SSGIKIPGSVH 383
VP G +P RPW ++PGS H
Sbjct: 92 VPVYYGNFPPRPIMVRPWVPMRGQVPGSRH 121
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 4.4
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +3
Query: 294 VPPERGLYPGCEFGYRPW*SSGIKIPGSVH 383
VP G +P RPW ++PGS H
Sbjct: 92 VPVYYGNFPPRPIMVRPWVPMRGQVPGSRH 121
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 4.4
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +3
Query: 294 VPPERGLYPGCEFGYRPW*SSGIKIPGSVH 383
VP G +P RPW ++PGS H
Sbjct: 92 VPVYYGNFPPRPIMVRPWVPMRGQVPGSRH 121
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 4.4
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +3
Query: 294 VPPERGLYPGCEFGYRPW*SSGIKIPGSVH 383
VP G +P RPW ++PGS H
Sbjct: 92 VPVYYGNFPPRPIMVRPWVPMRGQVPGSRH 121
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 4.4
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +3
Query: 294 VPPERGLYPGCEFGYRPW*SSGIKIPGSVH 383
VP G +P RPW ++PGS H
Sbjct: 92 VPVYYGNFPPRPIMVRPWVPMRGQVPGSRH 121
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.4
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +3
Query: 294 VPPERGLYPGCEFGYRPW*SSGIKIPGSVH 383
VP G +P RPW ++PGS H
Sbjct: 341 VPVYYGNFPPRPIMVRPWVPMRGQVPGSRH 370
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.4
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +3
Query: 294 VPPERGLYPGCEFGYRPW*SSGIKIPGSVH 383
VP G +P RPW ++PGS H
Sbjct: 341 VPVYYGNFPPRPIMVRPWVPMRGQVPGSRH 370
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.4
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +3
Query: 294 VPPERGLYPGCEFGYRPW*SSGIKIPGSVH 383
VP G +P RPW ++PGS H
Sbjct: 341 VPVYYGNFPPRPIMVRPWVPMRGQVPGSRH 370
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.4
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +3
Query: 294 VPPERGLYPGCEFGYRPW*SSGIKIPGSVH 383
VP G +P RPW ++PGS H
Sbjct: 341 VPVYYGNFPPRPIMVRPWVPMRGQVPGSRH 370
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.4
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +3
Query: 294 VPPERGLYPGCEFGYRPW*SSGIKIPGSVH 383
VP G +P RPW ++PGS H
Sbjct: 341 VPVYYGNFPPRPIMVRPWVPMRGQVPGSRH 370
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.4
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +3
Query: 294 VPPERGLYPGCEFGYRPW*SSGIKIPGSVH 383
VP G +P RPW ++PGS H
Sbjct: 341 VPVYYGNFPPRPIMVRPWVPMRGQVPGSRH 370
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.2 bits (45), Expect = 4.4
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +3
Query: 294 VPPERGLYPGCEFGYRPW*SSGIKIPGSVH 383
VP G +P RPW ++PGS H
Sbjct: 325 VPVYYGNFPPRPIMVRPWVPMRGQVPGSRH 354
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.4
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +3
Query: 294 VPPERGLYPGCEFGYRPW*SSGIKIPGSVH 383
VP G +P RPW ++PGS H
Sbjct: 341 VPVYYGNFPPRPIMVRPWVPMRGQVPGSRH 370
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 22.2 bits (45), Expect = 4.4
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 512 VTITSTISSDIMLPHNSSHSMLGRPSRASTSPS 610
VT+ ++SD+ H S R S AST+ S
Sbjct: 261 VTVNRQLNSDVQPGHGSPPVKQHRSSSASTTCS 293
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 21.8 bits (44), Expect = 5.8
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 84 RPRRPHGRAEVQPRVDGLQHQRGRVSLPTPRH 179
+PR PH R +P + ++ + P P H
Sbjct: 108 QPRPPHPRLRREPEAEPGNNRPVYIPQPRPPH 139
Score = 21.8 bits (44), Expect = 5.8
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 84 RPRRPHGRAEVQPRVDGLQHQRGRVSLPTPRH 179
+PR PH R +P + ++ + P P H
Sbjct: 134 QPRPPHPRLRREPEAEPGNNRPVYIPQPRPPH 165
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 121 LEWMDYSTNVAESAY 165
LEW+DY+ ES Y
Sbjct: 41 LEWVDYNLQWNESEY 55
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 121 LEWMDYSTNVAESAY 165
LEW+DY+ ES Y
Sbjct: 41 LEWVDYNLQWNESEY 55
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 121 LEWMDYSTNVAESAY 165
LEW+DY+ ES Y
Sbjct: 41 LEWVDYNLQWNESEY 55
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 121 LEWMDYSTNVAESAY 165
LEW+DY+ ES Y
Sbjct: 41 LEWVDYNLQWNESEY 55
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 121 LEWMDYSTNVAESAY 165
LEW+DY+ ES Y
Sbjct: 41 LEWVDYNLQWNESEY 55
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 121 LEWMDYSTNVAESAY 165
LEW+DY+ ES Y
Sbjct: 41 LEWVDYNLQWNESEY 55
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 5.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 121 LEWMDYSTNVAESAY 165
LEW+DY+ ES Y
Sbjct: 109 LEWVDYNLQWNESEY 123
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 5.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 121 LEWMDYSTNVAESAY 165
LEW+DY+ ES Y
Sbjct: 109 LEWVDYNLQWNESEY 123
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 21.4 bits (43), Expect = 7.7
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 365 NSRIRSLLTDITSSC*STSPNQSLLVITPSQ 457
+ R S + D S S SP+ SLL P Q
Sbjct: 25 SKRFSSSIVDRRSPSSSRSPSPSLLTSQPHQ 55
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,317
Number of Sequences: 438
Number of extensions: 4529
Number of successful extensions: 30
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19315974
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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