Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV1e12r
         (780 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084153-10|AAK84591.1|  184|Caenorhabditis elegans Hypothetical...    28   6.5  

>AC084153-10|AAK84591.1|  184|Caenorhabditis elegans Hypothetical
           protein Y22D7AL.2 protein.
          Length = 184

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
 Frame = -2

Query: 566 FKMNCDIHGVISMSFGNHL-TPGGT*TYFIIIILQPFSQSPGAGTTCFFLPYSSIIYHFF 390
           F  NC    V + S  NHL T     T  ++      S+      TC  LP ++   HF 
Sbjct: 125 FTSNCGTPNVSAASKNNHLFTLHCAHTKLLV------SRQTAEPRTCRPLPKTTTSSHFI 178

Query: 389 AHSPSY 372
           AH+P+Y
Sbjct: 179 AHTPNY 184


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,584,465
Number of Sequences: 27780
Number of extensions: 360383
Number of successful extensions: 661
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)