Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV1e11f
         (307 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IPS9 Cluster: CG32448-PA; n=6; Endopterygota|Rep: CG3...   109   9e-24
UniRef50_Q96KF7 Cluster: Uncharacterized protein C6orf162; n=21;...    69   2e-11
UniRef50_Q6ZR71 Cluster: CDNA FLJ46589 fis, clone THYMU3044188; ...    32   2.9  
UniRef50_A0CTP2 Cluster: Chromosome undetermined scaffold_27, wh...    31   3.8  
UniRef50_Q9WYS8 Cluster: Phosphoribosylaminoimidazole carboxylas...    31   5.0  
UniRef50_Q3VJW1 Cluster: Putative uncharacterized protein; n=1; ...    31   6.7  
UniRef50_A6AYI9 Cluster: Cyclic diguanylate phosphodiesterase (E...    31   6.7  
UniRef50_A2U2H7 Cluster: Putative uncharacterized protein; n=1; ...    31   6.7  
UniRef50_Q2BLJ0 Cluster: Putative uncharacterized protein; n=1; ...    30   8.8  
UniRef50_Q8T6B4 Cluster: Non-transporter ABC protein AbcF4; n=3;...    30   8.8  

>UniRef50_Q8IPS9 Cluster: CG32448-PA; n=6; Endopterygota|Rep:
           CG32448-PA - Drosophila melanogaster (Fruit fly)
          Length = 99

 Score =  109 bits (263), Expect = 9e-24
 Identities = 47/76 (61%), Positives = 59/76 (77%)
 Frame = +2

Query: 5   PGEGLRSMRSTTAFRVVNFELYAKPNIVIMSIGLTCFGLALGYIAYMRQKYESMGYYSAI 184
           PG+G+RSMRST  FR++NFELY KPN +IM +GLT      GYIAYMR KYES+GYY A+
Sbjct: 23  PGDGIRSMRSTGVFRLINFELYTKPNKIIMGLGLTAIAGVFGYIAYMRYKYESLGYYVAV 82

Query: 185 DKDGKEIFEKKKSKWD 232
            ++G+E F KKKS W+
Sbjct: 83  QENGQEKFIKKKSNWE 98


>UniRef50_Q96KF7 Cluster: Uncharacterized protein C6orf162; n=21;
           Euteleostomi|Rep: Uncharacterized protein C6orf162 -
           Homo sapiens (Human)
          Length = 97

 Score = 68.9 bits (161), Expect = 2e-11
 Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
 Frame = +2

Query: 14  GLRSMRSTTAFRVVNFELYAKPNIVIMSIGLTCFGLALGYIAYMRQKYES-MGYYSAIDK 190
           GLR +R+TT FR VN EL+ KPN  +M+ GL    L + YI Y+    E+    Y AID 
Sbjct: 24  GLRGVRTTTLFRAVNPELFIKPNKPVMAFGLVTLSLCVAYIGYLHAIQENKKDLYEAIDS 83

Query: 191 DGKEIFEKKKSKWD 232
           +G     +K SKWD
Sbjct: 84  EGHSYMRRKTSKWD 97


>UniRef50_Q6ZR71 Cluster: CDNA FLJ46589 fis, clone THYMU3044188;
           n=1; Homo sapiens|Rep: CDNA FLJ46589 fis, clone
           THYMU3044188 - Homo sapiens (Human)
          Length = 121

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -2

Query: 303 FFNHYLLL-QYINSYLQFLQIL*FQSHFDFFFSKISFPSLS 184
           F + +L L  ++ S+L FL  L F S F FF+   SFP  S
Sbjct: 5   FLSFFLFLPSFLFSFLFFLSFLFFSSFFSFFYFLSSFPLFS 45


>UniRef50_A0CTP2 Cluster: Chromosome undetermined scaffold_27, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_27,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 450

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -2

Query: 141 YAMYPRAKPKHVSPMLIMTILGFAYSSKLTTLNAVVDRIDRK 16
           +A++ R+ PK +  +L+  I  F Y   L TLN +VD  + K
Sbjct: 28  HAVFDRSIPKLIEILLMENIEAFKYRDALITLNEMVDHQEMK 69


>UniRef50_Q9WYS8 Cluster: Phosphoribosylaminoimidazole carboxylase,
           ATPase subunit; n=4; cellular organisms|Rep:
           Phosphoribosylaminoimidazole carboxylase, ATPase subunit
           - Thermotoga maritima
          Length = 380

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +2

Query: 68  YAKPNIVIMSIGLTCFGLALGYIAYMRQK-YESMGYYSAIDKDGKEIFEK 214
           Y KP ++ +   L   GL+L +      + Y  MG+++ +D+D +   EK
Sbjct: 311 YGKPALIGLEEALAIEGLSLHFYGKKETRPYRKMGHFTVVDRDVERALEK 360


>UniRef50_Q3VJW1 Cluster: Putative uncharacterized protein; n=1;
           Pelodictyon phaeoclathratiforme BU-1|Rep: Putative
           uncharacterized protein - Pelodictyon
           phaeoclathratiforme BU-1
          Length = 129

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +2

Query: 146 RQKYESMGYYSAIDKDGKEIFEKKKSKWD 232
           RQ+ E + Y    DKDG EIFE    +WD
Sbjct: 56  RQRSEWLQYTGLDDKDGHEIFEGDLLEWD 84


>UniRef50_A6AYI9 Cluster: Cyclic diguanylate phosphodiesterase (EAL)
           domain, putative; n=2; Vibrio parahaemolyticus|Rep:
           Cyclic diguanylate phosphodiesterase (EAL) domain,
           putative - Vibrio parahaemolyticus AQ3810
          Length = 245

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
 Frame = +3

Query: 117 VWL*DTLHTCDK--NMNQWDIILLLIKMEKRFLKRRNQNGIEIIEF 248
           +WL D  H  +K  NM+  +I+   IK++K FLK  +Q  I+ +E+
Sbjct: 140 IWL-DDYHRNNKLANMSLGNILWDRIKIDKSFLKHADQESIQALEY 184


>UniRef50_A2U2H7 Cluster: Putative uncharacterized protein; n=1;
           Polaribacter dokdonensis MED152|Rep: Putative
           uncharacterized protein - Polaribacter dokdonensis
           MED152
          Length = 1153

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +2

Query: 56  NFELYAKPNIVIMSIGLTCFGLALGYIAYMRQKYESMGYYSA--IDKDGKEIFEK 214
           N + Y   N+V        FG  +G+I Y RQK + +GY S   +  DG   ++K
Sbjct: 374 NLKYYINSNLVYTEYSPEYFGKRVGFIVYDRQKIK-VGYLSIAYLKDDGNSNYKK 427


>UniRef50_Q2BLJ0 Cluster: Putative uncharacterized protein; n=1;
           Neptuniibacter caesariensis|Rep: Putative
           uncharacterized protein - Neptuniibacter caesariensis
          Length = 179

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 17/63 (26%), Positives = 32/63 (50%)
 Frame = +2

Query: 26  MRSTTAFRVVNFELYAKPNIVIMSIGLTCFGLALGYIAYMRQKYESMGYYSAIDKDGKEI 205
           +RS    R    E++ K ++V  S+G+  FG+   YIA ++  + +  ++  + K G   
Sbjct: 106 LRSYKNSRYPLVEVFRKGDLVDFSMGVIRFGVGKDYIAEVKAAFPNADFHKNLAKRGGRW 165

Query: 206 FEK 214
           F K
Sbjct: 166 FLK 168


>UniRef50_Q8T6B4 Cluster: Non-transporter ABC protein AbcF4; n=3;
           Eukaryota|Rep: Non-transporter ABC protein AbcF4 -
           Dictyostelium discoideum (Slime mold)
          Length = 1142

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 19/46 (41%), Positives = 23/46 (50%)
 Frame = +3

Query: 102 D*HALVWL*DTLHTCDKNMNQWDIILLLIKMEKRFLKRRNQNGIEI 239
           D HA VWL       +K +NQWD  LL++  E  FL     N I I
Sbjct: 792 DLHACVWL-------EKYLNQWDRTLLVVSHEASFLNEVVDNIIYI 830


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 283,496,341
Number of Sequences: 1657284
Number of extensions: 5138944
Number of successful extensions: 13209
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13208
length of database: 575,637,011
effective HSP length: 78
effective length of database: 446,368,859
effective search space used: 10266483757
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)