Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV1e11f
         (307 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   3.8  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    20   5.1  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    20   5.1  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    20   5.1  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    20   6.7  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -2

Query: 276 YINSYLQFLQIL*FQSHFDFFFSKISFPSLS 184
           +IN  +++L I      +DF  ++  +PSL+
Sbjct: 14  FINPLVKYLNIFFITPWYDFPTNQKYYPSLA 44


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 20.2 bits (40), Expect = 5.1
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -2

Query: 225 FDFFFSKISF 196
           FD+FF K+S+
Sbjct: 190 FDYFFGKMSY 199


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 20.2 bits (40), Expect = 5.1
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -2

Query: 225 FDFFFSKISF 196
           FD+FF K+S+
Sbjct: 190 FDYFFGKMSY 199


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 20.2 bits (40), Expect = 5.1
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -2

Query: 225 FDFFFSKISF 196
           FD+FF K+S+
Sbjct: 190 FDYFFGKMSY 199


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -2

Query: 276 YINSYLQFLQIL*FQSHFDFFFSKIS 199
           ++N Y+Q +++L   S+     +KIS
Sbjct: 167 FVNEYVQAIEVLYICSYTVLIRNKIS 192


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,652
Number of Sequences: 336
Number of extensions: 1550
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5518292
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)