Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV1e06f
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    24   1.1  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   4.4  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   5.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.8  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +3

Query: 468 SSVYWYSGAAITYAIGSLILIIPTVMLFRLKT*AFINIYFTRNKERIES*FYIT-IYN 638
           +S++ Y    IT+ IGS +++     + +     F +I F R   +  + F IT  YN
Sbjct: 368 NSLFGYQTLLITFHIGSQLVLHTVKTVLKTTMSTFSDITFMRTVWKFFNIFLITPFYN 425


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +2

Query: 137 GNRFNNGCTARR 172
           GN F NGC  RR
Sbjct: 221 GNMFENGCYLRR 232


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 33  YFLYLFVYSGLEFTITFLTHHNFKYT 110
           YF+YLF    + +++   +  NF YT
Sbjct: 149 YFIYLFTVYYIYYSVHEASIINFGYT 174


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 619 FTLLFIMPCI*IIVFCLY 672
           FT+  +  C+ II+ C+Y
Sbjct: 222 FTIHLLFYCVLIILLCIY 239


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,218
Number of Sequences: 336
Number of extensions: 3368
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)