Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV1e06f
         (728 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L11669-1|AAA36729.1|  455|Homo sapiens tetracycline transporter-...   114   4e-25
BC014979-1|AAH14979.1|  455|Homo sapiens tetracycline transporte...   114   4e-25
BC001502-1|AAH01502.1|  455|Homo sapiens tetracycline transporte...   114   4e-25
AL390065-4|CAM21300.1|  455|Homo sapiens tetracycline transporte...   114   4e-25

>L11669-1|AAA36729.1|  455|Homo sapiens tetracycline
           transporter-like protein protein.
          Length = 455

 Score =  114 bits (274), Expect = 4e-25
 Identities = 63/182 (34%), Positives = 97/182 (53%)
 Frame = +3

Query: 12  LSKLGLIYFLYLFVYSGLEFTITFLTHHNFKYTAMQQGKMFLVIGLIMAVLQGGAARRLG 191
           L +LGL+YFLYLF++SGLE+T++FLTH  F+++++QQGKMF +IGL MA +QG  ARR+ 
Sbjct: 272 LRRLGLVYFLYLFLFSGLEYTLSFLTHQRFQFSSLQQGKMFFLIGLTMATIQGAYARRIH 331

Query: 192 TKSAEVAARVSVALTPFAFLCIALAALSNPPFLAPLIWLWTGLVLYALSTAFAVSCMTSI 371
                 A + ++ L   AFL I            P++ L  GL+LY+ + A  V C++S+
Sbjct: 332 PGGEVAAVKRALLLLVPAFLLIGWGR------SLPVLGL--GLLLYSFAAAVVVPCLSSV 383

Query: 372 XXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXSSVYWYSGAAITYAIGSLILIIPTVMLF 551
                       V                   +SVYW +GA   +   S + ++P  +L 
Sbjct: 384 VAGYGSPGQKGTVMGTLRSLGALARAAGPLVAASVYWLAGAQACFTTWSGLFLLPFFLLQ 443

Query: 552 RL 557
           +L
Sbjct: 444 KL 445


>BC014979-1|AAH14979.1|  455|Homo sapiens tetracycline
           transporter-like protein protein.
          Length = 455

 Score =  114 bits (274), Expect = 4e-25
 Identities = 63/182 (34%), Positives = 97/182 (53%)
 Frame = +3

Query: 12  LSKLGLIYFLYLFVYSGLEFTITFLTHHNFKYTAMQQGKMFLVIGLIMAVLQGGAARRLG 191
           L +LGL+YFLYLF++SGLE+T++FLTH  F+++++QQGKMF +IGL MA +QG  ARR+ 
Sbjct: 272 LRRLGLVYFLYLFLFSGLEYTLSFLTHQRFQFSSLQQGKMFFLIGLTMATIQGAYARRIH 331

Query: 192 TKSAEVAARVSVALTPFAFLCIALAALSNPPFLAPLIWLWTGLVLYALSTAFAVSCMTSI 371
                 A + ++ L   AFL I            P++ L  GL+LY+ + A  V C++S+
Sbjct: 332 PGGEVAAVKRALLLLVPAFLLIGWGR------SLPVLGL--GLLLYSFAAAVVVPCLSSV 383

Query: 372 XXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXSSVYWYSGAAITYAIGSLILIIPTVMLF 551
                       V                   +SVYW +GA   +   S + ++P  +L 
Sbjct: 384 VAGYGSPGQKGTVMGTLRSLGALARAAGPLVAASVYWLAGAQACFTTWSGLFLLPFFLLQ 443

Query: 552 RL 557
           +L
Sbjct: 444 KL 445


>BC001502-1|AAH01502.1|  455|Homo sapiens tetracycline
           transporter-like protein protein.
          Length = 455

 Score =  114 bits (274), Expect = 4e-25
 Identities = 63/182 (34%), Positives = 97/182 (53%)
 Frame = +3

Query: 12  LSKLGLIYFLYLFVYSGLEFTITFLTHHNFKYTAMQQGKMFLVIGLIMAVLQGGAARRLG 191
           L +LGL+YFLYLF++SGLE+T++FLTH  F+++++QQGKMF +IGL MA +QG  ARR+ 
Sbjct: 272 LRRLGLVYFLYLFLFSGLEYTLSFLTHQRFQFSSLQQGKMFFLIGLTMATIQGAYARRIH 331

Query: 192 TKSAEVAARVSVALTPFAFLCIALAALSNPPFLAPLIWLWTGLVLYALSTAFAVSCMTSI 371
                 A + ++ L   AFL I            P++ L  GL+LY+ + A  V C++S+
Sbjct: 332 PGGEVAAVKRALLLLVPAFLLIGWGR------SLPVLGL--GLLLYSFAAAVVVPCLSSV 383

Query: 372 XXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXSSVYWYSGAAITYAIGSLILIIPTVMLF 551
                       V                   +SVYW +GA   +   S + ++P  +L 
Sbjct: 384 VAGYGSPGQKGTVMGTLRSLGALARAAGPLVAASVYWLAGAQACFTTWSGLFLLPFFLLQ 443

Query: 552 RL 557
           +L
Sbjct: 444 KL 445


>AL390065-4|CAM21300.1|  455|Homo sapiens tetracycline
           transporter-like protein protein.
          Length = 455

 Score =  114 bits (274), Expect = 4e-25
 Identities = 63/182 (34%), Positives = 97/182 (53%)
 Frame = +3

Query: 12  LSKLGLIYFLYLFVYSGLEFTITFLTHHNFKYTAMQQGKMFLVIGLIMAVLQGGAARRLG 191
           L +LGL+YFLYLF++SGLE+T++FLTH  F+++++QQGKMF +IGL MA +QG  ARR+ 
Sbjct: 272 LRRLGLVYFLYLFLFSGLEYTLSFLTHQRFQFSSLQQGKMFFLIGLTMATIQGAYARRIH 331

Query: 192 TKSAEVAARVSVALTPFAFLCIALAALSNPPFLAPLIWLWTGLVLYALSTAFAVSCMTSI 371
                 A + ++ L   AFL I            P++ L  GL+LY+ + A  V C++S+
Sbjct: 332 PGGEVAAVKRALLLLVPAFLLIGWGR------SLPVLGL--GLLLYSFAAAVVVPCLSSV 383

Query: 372 XXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXSSVYWYSGAAITYAIGSLILIIPTVMLF 551
                       V                   +SVYW +GA   +   S + ++P  +L 
Sbjct: 384 VAGYGSPGQKGTVMGTLRSLGALARAAGPLVAASVYWLAGAQACFTTWSGLFLLPFFLLQ 443

Query: 552 RL 557
           +L
Sbjct: 444 KL 445


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,541,227
Number of Sequences: 237096
Number of extensions: 1942963
Number of successful extensions: 3220
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3210
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)