Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV1e06f
         (728 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF181656-1|AAD55441.1|  477|Drosophila melanogaster BcDNA.LD2841...   125   7e-29
AE014297-2929|AAF55849.1|  477|Drosophila melanogaster CG5760-PA...   125   7e-29
BT001321-1|AAN71076.1| 1023|Drosophila melanogaster AT15860p pro...    30   2.8  
AY089344-1|AAL90082.1|  922|Drosophila melanogaster AT16542p pro...    30   2.8  
AY070877-1|AAL48499.1|   75|Drosophila melanogaster LD10051p pro...    30   2.8  
AE014296-2480|AAF49661.2|  922|Drosophila melanogaster CG13457-P...    30   2.8  
AE014296-2479|AAN11789.1| 1023|Drosophila melanogaster CG13457-P...    30   2.8  
AE013599-174|AAF57357.1|   75|Drosophila melanogaster CG15234-PA...    30   2.8  

>AF181656-1|AAD55441.1|  477|Drosophila melanogaster BcDNA.LD28419
           protein.
          Length = 477

 Score =  125 bits (301), Expect = 7e-29
 Identities = 71/183 (38%), Positives = 96/183 (52%)
 Frame = +3

Query: 12  LSKLGLIYFLYLFVYSGLEFTITFLTHHNFKYTAMQQGKMFLVIGLIMAVLQGGAARRLG 191
           L  +GL+YFLYLF+YSGLEFT+TFL +H F YT+M Q KMFL  G+IM +LQG   RRL 
Sbjct: 302 LRSIGLVYFLYLFLYSGLEFTVTFLMYHKFGYTSMDQAKMFLTTGVIMTLLQGSVVRRLP 361

Query: 192 TKSAEVAARVSVALTPFAFLCIALAALSNPPFLAPLIWLWTGLVLYALSTAFAVSCMTSI 371
               +  A  S+ L   AF+ + LA  S          L+ G+ L+A+STAFAV+C+T++
Sbjct: 362 EAKIKGYAIFSLYLIVPAFVVVGLAEGSR--------MLYAGMTLFAISTAFAVTCLTTL 413

Query: 372 XXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXSSVYWYSGAAITYAIGSLILIIPTVMLF 551
                       V                      +W  G+ ITY  G L+LI P + L 
Sbjct: 414 VSKYGNDDQKGSVLGIFRSLGALARALGPVVGCIAFWCVGSRITYIAGGLLLIYPAMALQ 473

Query: 552 RLK 560
           R +
Sbjct: 474 RAR 476


>AE014297-2929|AAF55849.1|  477|Drosophila melanogaster CG5760-PA
           protein.
          Length = 477

 Score =  125 bits (301), Expect = 7e-29
 Identities = 71/183 (38%), Positives = 96/183 (52%)
 Frame = +3

Query: 12  LSKLGLIYFLYLFVYSGLEFTITFLTHHNFKYTAMQQGKMFLVIGLIMAVLQGGAARRLG 191
           L  +GL+YFLYLF+YSGLEFT+TFL +H F YT+M Q KMFL  G+IM +LQG   RRL 
Sbjct: 302 LRSIGLVYFLYLFLYSGLEFTVTFLMYHKFGYTSMDQAKMFLTTGVIMTLLQGSVVRRLP 361

Query: 192 TKSAEVAARVSVALTPFAFLCIALAALSNPPFLAPLIWLWTGLVLYALSTAFAVSCMTSI 371
               +  A  S+ L   AF+ + LA  S          L+ G+ L+A+STAFAV+C+T++
Sbjct: 362 EAKIKGYAIFSLYLIVPAFVVVGLAEGSR--------MLYAGMTLFAISTAFAVTCLTTL 413

Query: 372 XXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXSSVYWYSGAAITYAIGSLILIIPTVMLF 551
                       V                      +W  G+ ITY  G L+LI P + L 
Sbjct: 414 VSKYGNDDQKGSVLGIFRSLGALARALGPVVGCIAFWCVGSRITYIAGGLLLIYPAMALQ 473

Query: 552 RLK 560
           R +
Sbjct: 474 RAR 476


>BT001321-1|AAN71076.1| 1023|Drosophila melanogaster AT15860p
           protein.
          Length = 1023

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 15/36 (41%), Positives = 17/36 (47%)
 Frame = +2

Query: 359 HDVNRSQPSTGCGPRRRPRHSALAGSASQGCRPTSY 466
           H   R QP + CG RR   HS      +Q   PTSY
Sbjct: 543 HCEERVQPDSKCGDRRIRAHSVQRSVLAQSRGPTSY 578


>AY089344-1|AAL90082.1|  922|Drosophila melanogaster AT16542p
           protein.
          Length = 922

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 15/36 (41%), Positives = 17/36 (47%)
 Frame = +2

Query: 359 HDVNRSQPSTGCGPRRRPRHSALAGSASQGCRPTSY 466
           H   R QP + CG RR   HS      +Q   PTSY
Sbjct: 442 HCEERVQPDSKCGDRRIRAHSVQRSVLAQSRGPTSY 477


>AY070877-1|AAL48499.1|   75|Drosophila melanogaster LD10051p
           protein.
          Length = 75

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = -3

Query: 444 WLAL-PASAECRGRRRGPHPVLGWLLLTSCKTPRTP*IKRTRLSRSIAISTGPKMADSIE 268
           WL L P+S + RG  RGP P  G  L T   T R P +   R+         P   D +E
Sbjct: 7   WLRLAPSSTKTRGPGRGPGPGAGLGLKTGTGTGRGPEV-WPRVKEGQGQGLSPAAIDRVE 65

Query: 267 RL 262
           ++
Sbjct: 66  QI 67


>AE014296-2480|AAF49661.2|  922|Drosophila melanogaster CG13457-PA,
           isoform A protein.
          Length = 922

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 15/36 (41%), Positives = 17/36 (47%)
 Frame = +2

Query: 359 HDVNRSQPSTGCGPRRRPRHSALAGSASQGCRPTSY 466
           H   R QP + CG RR   HS      +Q   PTSY
Sbjct: 442 HCEERVQPDSKCGDRRIRAHSVQRSVLAQSRGPTSY 477


>AE014296-2479|AAN11789.1| 1023|Drosophila melanogaster CG13457-PB,
           isoform B protein.
          Length = 1023

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 15/36 (41%), Positives = 17/36 (47%)
 Frame = +2

Query: 359 HDVNRSQPSTGCGPRRRPRHSALAGSASQGCRPTSY 466
           H   R QP + CG RR   HS      +Q   PTSY
Sbjct: 543 HCEERVQPDSKCGDRRIRAHSVQRSVLAQSRGPTSY 578


>AE013599-174|AAF57357.1|   75|Drosophila melanogaster CG15234-PA
           protein.
          Length = 75

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = -3

Query: 444 WLAL-PASAECRGRRRGPHPVLGWLLLTSCKTPRTP*IKRTRLSRSIAISTGPKMADSIE 268
           WL L P+S + RG  RGP P  G  L T   T R P +   R+         P   D +E
Sbjct: 7   WLRLAPSSTKTRGPGRGPGPGAGLGLKTGTGTGRGPEV-WPRVKEGQGQGLSPAAIDRVE 65

Query: 267 RL 262
           ++
Sbjct: 66  QI 67


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,042,427
Number of Sequences: 53049
Number of extensions: 547993
Number of successful extensions: 1329
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1325
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)