Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV1e02f
(688 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical pr... 39 0.004
U41532-7|ABD63237.1| 769|Caenorhabditis elegans Hypothetical pr... 32 0.44
U41532-6|AAF99908.2| 812|Caenorhabditis elegans Hypothetical pr... 32 0.44
U37429-9|AAA79344.3| 796|Caenorhabditis elegans Hypothetical pr... 31 0.77
Z48717-8|CAA88609.1| 518|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z48717-1|CAA88603.1| 520|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z50797-4|CAA90674.1| 339|Caenorhabditis elegans Hypothetical pr... 28 5.4
AF036687-1|AAM75374.1| 173|Caenorhabditis elegans Hypothetical ... 28 5.4
Z81522-5|CAD98731.1| 663|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical pr... 27 9.5
U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T prot... 27 9.5
U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle position... 27 9.5
U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t pro... 27 9.5
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 27 9.5
>Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical
protein K08E3.4 protein.
Length = 643
Score = 38.7 bits (86), Expect = 0.004
Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 4/118 (3%)
Frame = +3
Query: 324 IRAAYEDVRSDTTPTEWAVFKFEG----ARIVCSARGSDFTEFRTQFSDDERAFGYLRLQ 491
I A+Y D+ +W +F +EG R+ G EF FS + FG + ++
Sbjct: 12 IEASYRRASDDSDGDKWVIFDYEGNSNTLRVKEEGTGG-LEEFADSFSSGKLQFGVISVR 70
Query: 492 MGDEMSKRKKFMFMTWVGPNVSVINRAKMSTDKAIIKDIISNFAVELQLENQSEIDID 665
+ ++ K + + W G V + A + + + V + L +SEIDI+
Sbjct: 71 LSSDVF--PKIVLVHWQGEGVPTLRLASTTPHAEEFRRFLK--TVHIVLHARSEIDIE 124
>U41532-7|ABD63237.1| 769|Caenorhabditis elegans Hypothetical
protein F11D5.1c protein.
Length = 769
Score = 31.9 bits (69), Expect = 0.44
Identities = 26/130 (20%), Positives = 55/130 (42%), Gaps = 1/130 (0%)
Frame = -1
Query: 685 LSASLNWSMSISD*FSSCNSTAKFDMMSLMIALSVDILARLITDTFGPTHVMNINFLRLD 506
+S++L W +I+ S + + S A + ++R + D + + + N + +
Sbjct: 398 ISSNL-WKPTINSPTMSTTESTISPVASSPTASKLPFVSRKVDDVGAKSMITSSNVVSIS 456
Query: 505 ISSPICNLRYPNARSSSENCVRNSVKSLPLAEHTIRAPSNLNTA-HSVGVVSDLTSS*AA 329
+ +P+ N Y N + E + + PL +PS +T+ +SV + S +
Sbjct: 457 VKAPVSNRIYSNYDKTDETTTDSMRSTAPLKPPITYSPSYTSTSLNSVSLSSKYVEEKSK 516
Query: 328 LIVSRSRPVV 299
+ PVV
Sbjct: 517 TSQGSTAPVV 526
>U41532-6|AAF99908.2| 812|Caenorhabditis elegans Hypothetical
protein F11D5.1a protein.
Length = 812
Score = 31.9 bits (69), Expect = 0.44
Identities = 26/130 (20%), Positives = 55/130 (42%), Gaps = 1/130 (0%)
Frame = -1
Query: 685 LSASLNWSMSISD*FSSCNSTAKFDMMSLMIALSVDILARLITDTFGPTHVMNINFLRLD 506
+S++L W +I+ S + + S A + ++R + D + + + N + +
Sbjct: 441 ISSNL-WKPTINSPTMSTTESTISPVASSPTASKLPFVSRKVDDVGAKSMITSSNVVSIS 499
Query: 505 ISSPICNLRYPNARSSSENCVRNSVKSLPLAEHTIRAPSNLNTA-HSVGVVSDLTSS*AA 329
+ +P+ N Y N + E + + PL +PS +T+ +SV + S +
Sbjct: 500 VKAPVSNRIYSNYDKTDETTTDSMRSTAPLKPPITYSPSYTSTSLNSVSLSSKYVEEKSK 559
Query: 328 LIVSRSRPVV 299
+ PVV
Sbjct: 560 TSQGSTAPVV 569
>U37429-9|AAA79344.3| 796|Caenorhabditis elegans Hypothetical
protein F09E5.5 protein.
Length = 796
Score = 31.1 bits (67), Expect = 0.77
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = -3
Query: 653 LRLIFKLQLHSKVRYDVLDDSFVGGHLGSVDHRHVRSYPRHEHKFLAFRHLVSHLQPEVS 474
L+ IF LQ + D LDD GG+L + H+H+ R + LA H +S E
Sbjct: 113 LKHIFNLQTTLQEIRDALDDEKSGGNL-LLAHKHIMDLERARDELLAEVHKMSGTNTEKE 171
Query: 473 ECAFI 459
+ +
Sbjct: 172 QMLLV 176
>Z48717-8|CAA88609.1| 518|Caenorhabditis elegans Hypothetical
protein T10B9.10 protein.
Length = 518
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +3
Query: 450 FSDDERAFGYLRLQMGDEMSKRKKFMFMTWVGPNVSVINRAKMSTDKAIIKDIISNFAVE 629
+ DD F R + GDE+ K +GP + + R M K ++ +I+ N+ E
Sbjct: 429 WGDDVNEFKPERWESGDELFFAKGGYLPFGMGPRICIGMRLAMMEMKMLLTNILKNYTFE 488
>Z48717-1|CAA88603.1| 520|Caenorhabditis elegans Hypothetical
protein T10B9.1 protein.
Length = 520
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/66 (22%), Positives = 28/66 (42%)
Frame = +3
Query: 450 FSDDERAFGYLRLQMGDEMSKRKKFMFMTWVGPNVSVINRAKMSTDKAIIKDIISNFAVE 629
+ DD F R + GDE+ K +GP + + R M +K ++ I+ + +
Sbjct: 429 WGDDASEFKPERWETGDELFYAKGGYLPFGMGPRICIGMRLAMMEEKLLLTHILKKYTFD 488
Query: 630 LQLENQ 647
E +
Sbjct: 489 TSTETE 494
>Z50797-4|CAA90674.1| 339|Caenorhabditis elegans Hypothetical
protein T22H6.3 protein.
Length = 339
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 336 YEDVRSDTTPTEWAVFKFEGARIVCSARGSDFT 434
Y+ +DTTP W +F+ G I C S F+
Sbjct: 184 YKSPDTDTTPAHWNLFQLFGLAICCVIMTSCFS 216
>AF036687-1|AAM75374.1| 173|Caenorhabditis elegans Hypothetical
protein C08G9.1 protein.
Length = 173
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 158 IEHKCPFDATYRTERLYSAVILVIRESNVGGFGI 259
IEH+ + TYR V+LVI +VGGF +
Sbjct: 128 IEHRPQPETTYRQNNSSLIVLLVIIPLSVGGFAV 161
>Z81522-5|CAD98731.1| 663|Caenorhabditis elegans Hypothetical
protein F32B4.4b protein.
Length = 663
Score = 27.5 bits (58), Expect = 9.5
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 6/43 (13%)
Frame = +1
Query: 382 SSLKAPG*CARPGVATSRSSARS------SLMMNAHSDTSGCR 492
S L+AP AR G +SRSS R SL +++ DTSGCR
Sbjct: 193 SPLRAPLRAAR-GSESSRSSTRGGGGGGESLTISSRVDTSGCR 234
>Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical
protein F32B4.4a protein.
Length = 771
Score = 27.5 bits (58), Expect = 9.5
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 6/43 (13%)
Frame = +1
Query: 382 SSLKAPG*CARPGVATSRSSARS------SLMMNAHSDTSGCR 492
S L+AP AR G +SRSS R SL +++ DTSGCR
Sbjct: 301 SPLRAPLRAAR-GSESSRSSTRGGGGGGESLTISSRVDTSGCR 342
>Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical protein
F46C3.3 protein.
Length = 2557
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Frame = -1
Query: 481 RYPNARSSSENCVRNSVKSLPLA-----EHTIRAPSNLNTAHSVGVVSD 350
RYP R ++ +R+ KSLP EH +R P + N+ + SD
Sbjct: 1394 RYPTLRRVDDSPLRSRAKSLPRIISPRHEHFVRRPHSRNSYSNESTSSD 1442
>Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical
protein F10B5.1 protein.
Length = 214
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 375 AVFKFEGARIVCSARGSDFTEFRTQFSDDERAFGYLR 485
A FKF G +I+ S+R FT++ + + RA G LR
Sbjct: 155 AKFKFPGRQIIVSSRKWGFTKWDREDYERMRAEGRLR 191
>U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T
protein.
Length = 405
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 234 RAMSEGLEYETIVQN-GPRKVTMTTGLDRETIRAAYEDVR 350
+A+ +GL+ E + P K+T + DR+T R +Y D R
Sbjct: 278 KALKKGLDPEEAASSVHPPKITTASKFDRQTDRRSYGDRR 317
>U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle positioning
protein 2 protein.
Length = 405
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 234 RAMSEGLEYETIVQN-GPRKVTMTTGLDRETIRAAYEDVR 350
+A+ +GL+ E + P K+T + DR+T R +Y D R
Sbjct: 278 KALKKGLDPEEAASSVHPPKITTASKFDRQTDRRSYGDRR 317
>U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t
protein 2, isoform b protein.
Length = 324
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 234 RAMSEGLEYETIVQN-GPRKVTMTTGLDRETIRAAYEDVR 350
+A+ +GL+ E + P K+T + DR+T R +Y D R
Sbjct: 183 KALKKGLDPEEAASSVHPPKITTASKFDRQTDRRSYGDRR 222
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 234 RAMSEGLEYETIVQN-GPRKVTMTTGLDRETIRAAYEDVR 350
+A+ +GL+ E + P K+T + DR+T R +Y D R
Sbjct: 287 KALKKGLDPEEAASSVHPPKITTASKFDRQTDRRSYGDRR 326
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,578,106
Number of Sequences: 27780
Number of extensions: 363825
Number of successful extensions: 839
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 839
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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