Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV1e01f
         (537 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q3LVY2 Cluster: Putative uncharacterized protein; n=1; ...    34   1.8  
UniRef50_Q5CG17 Cluster: Putative uncharacterized protein; n=2; ...    32   7.3  

>UniRef50_Q3LVY2 Cluster: Putative uncharacterized protein; n=1;
           Bigelowiella natans|Rep: Putative uncharacterized
           protein - Bigelowiella natans (Pedinomonas minutissima)
           (Chlorarachnion sp.(strain CCMP 621))
          Length = 351

 Score = 34.3 bits (75), Expect = 1.8
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
 Frame = -3

Query: 445 FNYFTPLFTNIINKLI-----LFCTLY-KSNANKPPYSFI*IKSSQKYKNTVEIINVNMI 284
           FN F  LF +++NK I     +FC  Y     N   Y  + + S  KY+  +EI ++  +
Sbjct: 80  FNIFFFLFISLLNKYITSIEYMFCLQYILLKKNNFLYDTLLVASVMKYRKLLEIFHIFKV 139

Query: 283 YE*GNLSYFRS 251
           Y+  NL+   S
Sbjct: 140 YQLSNLTKLNS 150


>UniRef50_Q5CG17 Cluster: Putative uncharacterized protein; n=2;
           Cryptosporidium|Rep: Putative uncharacterized protein -
           Cryptosporidium hominis
          Length = 494

 Score = 32.3 bits (70), Expect = 7.3
 Identities = 14/49 (28%), Positives = 27/49 (55%)
 Frame = -1

Query: 498 NFIRHPSRYRQVHS*IHNLIILLPYSQILLTN*YYFVHCTNQMLINHHT 352
           NFI +PS YR++H+   N ++     +I   N   F+ C +  + ++H+
Sbjct: 156 NFITNPSEYREIHNTNKNYLLFEMKQEISNVNEKTFLLCLSDSITSNHS 204


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 471,896,419
Number of Sequences: 1657284
Number of extensions: 8485279
Number of successful extensions: 12658
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12653
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34156095254
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)