Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV1d21r
(612 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_1017 - 13229717-13229893,13231518-13231748 84 7e-17
07_01_0840 + 6831220-6831438,6831515-6831691 73 2e-13
05_04_0108 - 18046813-18046989,18047331-18047423 69 3e-12
03_05_0205 - 21965782-21965979,21969169-21969417 69 3e-12
11_04_0473 + 18156314-18156388,18157255-18157356,18157714-18157983 44 7e-05
08_02_1499 - 27558872-27559015,27559544-27559666,27560214-275603... 42 4e-04
12_02_0619 - 21276591-21276719,21276798-21276920,21277425-212775... 40 0.001
09_06_0117 - 20953136-20953261,20953621-20953743,20953859-209539... 40 0.001
03_06_0743 - 35906119-35906247,35906747-35906869,35907841-359079... 36 0.025
06_02_0080 + 11518393-11518398,11520318-11520401,11520846-115209... 29 2.9
09_06_0235 - 21763470-21764511,21767865-21768261,21768625-217686... 28 5.1
02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812 28 5.1
01_01_0990 + 7847066-7847478,7847713-7848679 28 5.1
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 28 6.7
07_03_1042 + 23487326-23487443,23487555-23487957,23488057-234883... 28 6.7
04_04_0823 + 28383798-28383864,28384475-28384877,28387388-283879... 28 6.7
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 28 6.7
02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357 28 6.7
01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648 28 6.7
09_02_0487 + 9828283-9829354,9830436-9830580,9830863-9831153,983... 27 8.9
>03_02_1017 - 13229717-13229893,13231518-13231748
Length = 135
Score = 84.2 bits (199), Expect = 7e-17
Identities = 40/79 (50%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Frame = -1
Query: 495 SKLSVQEIEERVLKVCKAYDKLS-ASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEI 319
S L E+ ER++KV + + K+ +++T D+HF NDLGLDSLD VEV+MA+E+EFGFEI
Sbjct: 51 SFLDKAEVTERIVKVVRNFQKIDDPAKVTPDAHFKNDLGLDSLDAVEVVMALEEEFGFEI 110
Query: 318 PDGDAERLVRPKDIVQYIA 262
PD +A+++ K V +IA
Sbjct: 111 PDNEADKIDSIKVAVDFIA 129
>07_01_0840 + 6831220-6831438,6831515-6831691
Length = 131
Score = 72.9 bits (171), Expect = 2e-13
Identities = 33/76 (43%), Positives = 54/76 (71%)
Frame = -1
Query: 489 LSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIPDG 310
L+ E+ +R+L V K + K+ S+++ ++HF DLGLDSLD VEV+MA+E+EF EIPD
Sbjct: 50 LTRDEVVDRLLDVLKCHPKVDPSKVSPEAHFEKDLGLDSLDTVEVVMAIEEEFKLEIPDQ 109
Query: 309 DAERLVRPKDIVQYIA 262
+A+++ ++Y+A
Sbjct: 110 EADKIDSLPLAIEYVA 125
>05_04_0108 - 18046813-18046989,18047331-18047423
Length = 89
Score = 68.9 bits (161), Expect = 3e-12
Identities = 30/58 (51%), Positives = 43/58 (74%)
Frame = -1
Query: 435 KLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIPDGDAERLVRPKDIVQYIA 262
+L + +T ++HF DLGLDSLD VE++MA E+EFGFEIPD +AE++ K V ++A
Sbjct: 26 RLPDTLVTPNAHFQKDLGLDSLDTVEIVMAFEEEFGFEIPDNEAEKIDSIKTAVDFVA 83
>03_05_0205 - 21965782-21965979,21969169-21969417
Length = 148
Score = 68.9 bits (161), Expect = 3e-12
Identities = 34/90 (37%), Positives = 51/90 (56%)
Frame = -1
Query: 534 GVPQSHRYSTGVQSKLSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEV 355
G+ S G S + RV+++ K +D++ A ++T + F DL LDSLD VE+
Sbjct: 45 GMAASAGQEGGPPRDFSEGAVRARVVELVKKFDRIDADKVTETADFQRDLSLDSLDRVEL 104
Query: 354 IMAMEDEFGFEIPDGDAERLVRPKDIVQYI 265
+MA E EF EIPD A++L D+ +YI
Sbjct: 105 VMAFEQEFSVEIPDDKADKLSCCADVAKYI 134
>11_04_0473 + 18156314-18156388,18157255-18157356,18157714-18157983
Length = 148
Score = 44.4 bits (100), Expect = 7e-05
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = -1
Query: 465 RVLKVCKAYDKLSA-SQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIPDGDAERLVR 289
+V+++ K L ++L +S F +LG DSLD VE++MA+E+EFG + + +A+ +
Sbjct: 67 KVMQIVKQQLALGEEAKLAPESQF-TELGADSLDTVEIVMALEEEFGITVEEDNAQSITT 125
Query: 288 PKDIVQYI 265
+D I
Sbjct: 126 IQDAADLI 133
>08_02_1499 -
27558872-27559015,27559544-27559666,27560214-27560312,
27561257-27561307
Length = 138
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Frame = -1
Query: 471 EERVLKVCKAYDKLSA----SQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIPDGDA 304
+E V KVC K A ++++ S F +DLG DSLD VE++M +E+EF + + A
Sbjct: 53 KETVEKVCDIVKKQLAVPEGTEVSGASKF-SDLGADSLDTVEIVMGLEEEFHISVEESSA 111
Query: 303 ERLVRPKDIVQYI 265
+ + +D I
Sbjct: 112 QSIATVEDAAALI 124
>12_02_0619 -
21276591-21276719,21276798-21276920,21277425-21277535,
21277887-21277901,21279117-21279188
Length = 149
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = -1
Query: 480 QEIEERVLKVCKAYDKL-SASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIPDGDA 304
+E ++V + K L + +T +S F ++LG DSLD VE++M +E+EF + + A
Sbjct: 69 KETVDKVCNIVKTQLALPEGTAVTGESKF-SELGADSLDTVEIVMGLEEEFNITVDETSA 127
Query: 303 ERLVRPKDIVQYI 265
+ + +D I
Sbjct: 128 QDIATVQDAANLI 140
>09_06_0117 -
20953136-20953261,20953621-20953743,20953859-20953957,
20955344-20955403
Length = 135
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Frame = -1
Query: 471 EERVLKVCKAYDKL----SASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIPDGDA 304
+E V KVC K + +T S F DLG DSLD VE++M +E+ F + + A
Sbjct: 56 KETVEKVCDIVKKQLVLPEGTDVTGASKF-TDLGADSLDTVEIVMGLEEAFKISVDESSA 114
Query: 303 ERLVRPKDIVQYI 265
+ + +D + I
Sbjct: 115 QSIATVEDAAELI 127
>03_06_0743 -
35906119-35906247,35906747-35906869,35907841-35907954,
35908092-35908148
Length = 140
Score = 35.9 bits (79), Expect = 0.025
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Frame = -1
Query: 489 LSVQEIEERVLKVCKAY-DKLSASQLTV---DSHFMNDLGLDSLDHVEVIMAMEDEFGFE 322
LS ++ + KVC+ ++L+ + T ++ F+ DLG DSLD VE++M +E+ F
Sbjct: 54 LSCSAKQDTIDKVCEIVKNQLAVDEGTAVSGETKFV-DLGADSLDTVEIVMGLEEAFQIT 112
Query: 321 IPDGDAERLVRPKD 280
+ + A+ + +D
Sbjct: 113 VDESSAQVIQTVED 126
>06_02_0080 +
11518393-11518398,11520318-11520401,11520846-11520974,
11521362-11521450,11521589-11521772,11522414-11522504,
11522816-11522970,11523190-11523282,11523473-11523565,
11523715-11523795,11523867-11524016,11524134-11524229,
11524489-11524566
Length = 442
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = -1
Query: 486 SVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEI 319
++ ++ ER+L+ CK +K + Q T D+ ++ LG L V+V A+ E G ++
Sbjct: 274 TMDQVRERILQRCKEVEKTAIEQAT-DNAILDQLG--KLVEVDVPRALFQEQGQQL 326
>09_06_0235 -
21763470-21764511,21767865-21768261,21768625-21768632,
21769489-21769565
Length = 507
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +2
Query: 488 SLDCTPVEYRCDCGTPF*R 544
S C EYRCDCGT F R
Sbjct: 143 SKTCGTREYRCDCGTLFSR 161
>02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812
Length = 492
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 497 CTPVEYRCDCGTPF*R 544
C EYRCDCGT F R
Sbjct: 164 CGTKEYRCDCGTIFSR 179
>01_01_0990 + 7847066-7847478,7847713-7848679
Length = 459
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +2
Query: 488 SLDCTPVEYRCDCGTPF*R 544
S C EYRCDCGT F R
Sbjct: 120 SKTCGTREYRCDCGTLFSR 138
>08_01_0003 +
30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -1
Query: 492 KLSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHV 361
K + E V+++CKAYD L S T +D +H+
Sbjct: 112 KKYIDSFAEAVVEICKAYDDLPKSSETTTCMLPDDQSEQPTEHL 155
>07_03_1042 +
23487326-23487443,23487555-23487957,23488057-23488397,
23488621-23489660
Length = 633
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 497 CTPVEYRCDCGTPF*R 544
C EYRCDCGT F R
Sbjct: 159 CGTREYRCDCGTLFTR 174
>04_04_0823 +
28383798-28383864,28384475-28384877,28387388-28387932,
28387978-28388594
Length = 543
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 497 CTPVEYRCDCGTPF*R 544
C EYRCDCGT F R
Sbjct: 142 CGTREYRCDCGTLFSR 157
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 497 CTPVEYRCDCGTPF*R 544
C EYRCDCGT F R
Sbjct: 146 CGSREYRCDCGTLFSR 161
>02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357
Length = 215
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 497 CTPVEYRCDCGTPF*R 544
C EYRCDCGT F R
Sbjct: 194 CGTREYRCDCGTLFSR 209
>01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648
Length = 487
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 497 CTPVEYRCDCGTPF*R 544
C EYRCDCGT F R
Sbjct: 173 CGTREYRCDCGTLFSR 188
>09_02_0487 +
9828283-9829354,9830436-9830580,9830863-9831153,
9831984-9832032
Length = 518
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 63 HNGLKCTDNVCVKXKQKL 116
HN LKC D +C K K L
Sbjct: 163 HNYLKCVDTICAKGKHLL 180
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,345,700
Number of Sequences: 37544
Number of extensions: 257983
Number of successful extensions: 558
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 558
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1466594128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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