Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV1d21r
         (612 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF087660-1|AAD23566.1|  156|Homo sapiens NADH:ubiquinone oxidore...   108   2e-23
AC002400-1|AAC05814.1|  161|Homo sapiens Acyl carrier protein, M...   108   2e-23
BC058920-1|AAH58920.1|  156|Homo sapiens NADH dehydrogenase (ubi...   104   2e-22
EF036490-1|ABO65076.1|  124|Homo sapiens NADH:ubiquinone oxidore...    78   3e-14

>AF087660-1|AAD23566.1|  156|Homo sapiens NADH:ubiquinone
           oxidoreductase SDAP subunit protein.
          Length = 156

 Score =  108 bits (259), Expect = 2e-23
 Identities = 50/76 (65%), Positives = 64/76 (84%)
 Frame = -1

Query: 489 LSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIPDG 310
           L+++ I++RVL V K YDK+   +L+V+SHFM DLGLDSLD VE+IMAMEDEFGFEIPD 
Sbjct: 74  LTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPDI 133

Query: 309 DAERLVRPKDIVQYIA 262
           DAE+L+ P++IV YIA
Sbjct: 134 DAEKLMCPQEIVDYIA 149


>AC002400-1|AAC05814.1|  161|Homo sapiens Acyl carrier protein,
           Mitochondrial (ACP) (5'partial) protein.
          Length = 161

 Score =  108 bits (259), Expect = 2e-23
 Identities = 50/76 (65%), Positives = 64/76 (84%)
 Frame = -1

Query: 489 LSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIPDG 310
           L+++ I++RVL V K YDK+   +L+V+SHFM DLGLDSLD VE+IMAMEDEFGFEIPD 
Sbjct: 79  LTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPDI 138

Query: 309 DAERLVRPKDIVQYIA 262
           DAE+L+ P++IV YIA
Sbjct: 139 DAEKLMCPQEIVDYIA 154


>BC058920-1|AAH58920.1|  156|Homo sapiens NADH dehydrogenase
           (ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa protein.
          Length = 156

 Score =  104 bits (250), Expect = 2e-22
 Identities = 49/76 (64%), Positives = 63/76 (82%)
 Frame = -1

Query: 489 LSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIPDG 310
           L+++ I++RVL V K YDK+   +L+V+SHFM DLGLDSLD VE+IMAMEDEFGFEIP  
Sbjct: 74  LTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPYI 133

Query: 309 DAERLVRPKDIVQYIA 262
           DAE+L+ P++IV YIA
Sbjct: 134 DAEKLMCPQEIVDYIA 149


>EF036490-1|ABO65076.1|  124|Homo sapiens NADH:ubiquinone
           oxidoreductase SDAP subunit protein.
          Length = 124

 Score = 77.8 bits (183), Expect = 3e-14
 Identities = 35/54 (64%), Positives = 45/54 (83%)
 Frame = -1

Query: 489 LSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFG 328
           L+++ I++RVL V K YDK+   +L+V+SHFM DLGLDSLD VE+IMAMEDEFG
Sbjct: 71  LTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFG 124


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,053,531
Number of Sequences: 237096
Number of extensions: 1545583
Number of successful extensions: 2886
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2886
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)