Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV1d21f
         (631 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y09068-1|CAA70289.1|  143|Drosophila melanogaster NADH-ubiquinon...   121   7e-28
AY089404-1|AAL90142.1|  143|Drosophila melanogaster AT22870p pro...   121   7e-28
AJ000879-2|CAA04368.1|  143|Drosophila melanogaster mtAcyl carri...   121   7e-28
AE014296-232|AAF47479.1|  143|Drosophila melanogaster CG9160-PB,...   121   7e-28
AE014296-233|AAF47480.1|  152|Drosophila melanogaster CG9160-PA,...   120   2e-27
Y09069-1|CAA70290.1|  152|Drosophila melanogaster acyl-carrier s...   119   4e-27
AJ000879-3|CAA04369.1|  152|Drosophila melanogaster mtAcyl carri...   119   4e-27
BT025107-1|ABE73278.1|  501|Drosophila melanogaster IP10618p pro...    29   6.9  
BT021417-1|AAX33565.1|  420|Drosophila melanogaster LD04387p pro...    29   6.9  
AE014296-2922|AAF49330.1|  420|Drosophila melanogaster CG7564-PA...    29   6.9  
AE014134-1123|ABC65879.1|  398|Drosophila melanogaster CG34009-P...    29   6.9  

>Y09068-1|CAA70289.1|  143|Drosophila melanogaster NADH-ubiquinone
           oxidoreductaseacyl-carrier subunit protein.
          Length = 143

 Score =  121 bits (292), Expect = 7e-28
 Identities = 53/78 (67%), Positives = 70/78 (89%)
 Frame = +1

Query: 271 SKLSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIP 450
           +K ++++I+ RVLKV  AYDK++A +L V+SHF+NDLGLDSLDHVEVIMAMEDEFGFEIP
Sbjct: 59  AKSTIEDIKFRVLKVVSAYDKVTAEKLNVESHFINDLGLDSLDHVEVIMAMEDEFGFEIP 118

Query: 451 DGDAERLVRPKDIVQYIA 504
           D DAE+L++P DI++Y+A
Sbjct: 119 DSDAEKLLKPADIIKYVA 136


>AY089404-1|AAL90142.1|  143|Drosophila melanogaster AT22870p
           protein.
          Length = 143

 Score =  121 bits (292), Expect = 7e-28
 Identities = 53/78 (67%), Positives = 70/78 (89%)
 Frame = +1

Query: 271 SKLSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIP 450
           +K ++++I+ RVLKV  AYDK++A +L V+SHF+NDLGLDSLDHVEVIMAMEDEFGFEIP
Sbjct: 59  AKSTIEDIKFRVLKVVSAYDKVTAEKLNVESHFINDLGLDSLDHVEVIMAMEDEFGFEIP 118

Query: 451 DGDAERLVRPKDIVQYIA 504
           D DAE+L++P DI++Y+A
Sbjct: 119 DSDAEKLLKPADIIKYVA 136


>AJ000879-2|CAA04368.1|  143|Drosophila melanogaster mtAcyl carrier
           subunit isoform 1 protein.
          Length = 143

 Score =  121 bits (292), Expect = 7e-28
 Identities = 53/78 (67%), Positives = 70/78 (89%)
 Frame = +1

Query: 271 SKLSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIP 450
           +K ++++I+ RVLKV  AYDK++A +L V+SHF+NDLGLDSLDHVEVIMAMEDEFGFEIP
Sbjct: 59  AKSTIEDIKFRVLKVVSAYDKVTAEKLNVESHFINDLGLDSLDHVEVIMAMEDEFGFEIP 118

Query: 451 DGDAERLVRPKDIVQYIA 504
           D DAE+L++P DI++Y+A
Sbjct: 119 DSDAEKLLKPADIIKYVA 136


>AE014296-232|AAF47479.1|  143|Drosophila melanogaster CG9160-PB,
           isoform B protein.
          Length = 143

 Score =  121 bits (292), Expect = 7e-28
 Identities = 53/78 (67%), Positives = 70/78 (89%)
 Frame = +1

Query: 271 SKLSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIP 450
           +K ++++I+ RVLKV  AYDK++A +L V+SHF+NDLGLDSLDHVEVIMAMEDEFGFEIP
Sbjct: 59  AKSTIEDIKFRVLKVVSAYDKVTAEKLNVESHFINDLGLDSLDHVEVIMAMEDEFGFEIP 118

Query: 451 DGDAERLVRPKDIVQYIA 504
           D DAE+L++P DI++Y+A
Sbjct: 119 DSDAEKLLKPADIIKYVA 136


>AE014296-233|AAF47480.1|  152|Drosophila melanogaster CG9160-PA,
           isoform A protein.
          Length = 152

 Score =  120 bits (288), Expect = 2e-27
 Identities = 57/85 (67%), Positives = 70/85 (82%)
 Frame = +1

Query: 250 RYSTGVQSKLSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMED 429
           RYS   +  LS++ I ERVL V K YDK+  S+L V+SHF+NDLGLDSLDHVEVIMAMED
Sbjct: 63  RYSA--KPPLSLKLINERVLLVLKLYDKIDPSKLNVESHFINDLGLDSLDHVEVIMAMED 120

Query: 430 EFGFEIPDGDAERLVRPKDIVQYIA 504
           EFGFEIPD DAE+L++P DI++Y+A
Sbjct: 121 EFGFEIPDSDAEKLLKPADIIKYVA 145


>Y09069-1|CAA70290.1|  152|Drosophila melanogaster acyl-carrier
           subunit of NADH:ubiquinoneoxidoreductase protein.
          Length = 152

 Score =  119 bits (286), Expect = 4e-27
 Identities = 54/76 (71%), Positives = 66/76 (86%)
 Frame = +1

Query: 277 LSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIPDG 456
           LS++ I ERVL V K YDK+  S+L V+SHF+NDLGLDSLDHVEVIMAMEDEFGFEIPD 
Sbjct: 70  LSLKLINERVLLVLKLYDKIDPSKLNVESHFINDLGLDSLDHVEVIMAMEDEFGFEIPDS 129

Query: 457 DAERLVRPKDIVQYIA 504
           DAE+L++P DI++Y+A
Sbjct: 130 DAEKLLKPADIIKYVA 145


>AJ000879-3|CAA04369.1|  152|Drosophila melanogaster mtAcyl carrier
           subunit isoform 2 protein.
          Length = 152

 Score =  119 bits (286), Expect = 4e-27
 Identities = 54/76 (71%), Positives = 66/76 (86%)
 Frame = +1

Query: 277 LSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIPDG 456
           LS++ I ERVL V K YDK+  S+L V+SHF+NDLGLDSLDHVEVIMAMEDEFGFEIPD 
Sbjct: 70  LSLKLINERVLLVLKLYDKIDPSKLNVESHFINDLGLDSLDHVEVIMAMEDEFGFEIPDS 129

Query: 457 DAERLVRPKDIVQYIA 504
           DAE+L++P DI++Y+A
Sbjct: 130 DAEKLLKPADIIKYVA 145


>BT025107-1|ABE73278.1|  501|Drosophila melanogaster IP10618p
           protein.
          Length = 501

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 16/66 (24%), Positives = 31/66 (46%)
 Frame = +1

Query: 205 IYKSQALQNGVPQSHRYSTGVQSKLSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLG 384
           + K++  +N V Q   YS  +++   ++EIE   ++    Y      ++     F+N L 
Sbjct: 18  VCKAKKAENDVVQEVIYSNSIRALSELREIENSYMEHLNNYVSFLQQKIKTLRIFINSLT 77

Query: 385 LDSLDH 402
            + LDH
Sbjct: 78  PNYLDH 83


>BT021417-1|AAX33565.1|  420|Drosophila melanogaster LD04387p
           protein.
          Length = 420

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 17/64 (26%), Positives = 31/64 (48%)
 Frame = +1

Query: 235 VPQSHRYSTGVQSKLSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVI 414
           +   H Y T + +  + Q+ + RV +VC AY  +  + + +  HF   L L  L   E +
Sbjct: 172 IKAEHEYRTSMPAS-TYQQQKLRVCEVCSAYLGIHDNDIRLADHFGGKLHLGFLTIREKL 230

Query: 415 MAME 426
           + +E
Sbjct: 231 IELE 234


>AE014296-2922|AAF49330.1|  420|Drosophila melanogaster CG7564-PA
           protein.
          Length = 420

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 17/64 (26%), Positives = 31/64 (48%)
 Frame = +1

Query: 235 VPQSHRYSTGVQSKLSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVI 414
           +   H Y T + +  + Q+ + RV +VC AY  +  + + +  HF   L L  L   E +
Sbjct: 172 IKAEHEYRTSMPAS-TYQQQKLRVCEVCSAYLGIHDNDIRLADHFGGKLHLGFLTIREKL 230

Query: 415 MAME 426
           + +E
Sbjct: 231 IELE 234


>AE014134-1123|ABC65879.1|  398|Drosophila melanogaster CG34009-PA
           protein.
          Length = 398

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 16/66 (24%), Positives = 31/66 (46%)
 Frame = +1

Query: 205 IYKSQALQNGVPQSHRYSTGVQSKLSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLG 384
           + K++  +N V Q   YS  +++   ++EIE   ++    Y      ++     F+N L 
Sbjct: 243 VCKAKKAENDVVQEVIYSNSIRALSELREIENSYMEHLNNYVSFLQQKIKTLRIFINSLT 302

Query: 385 LDSLDH 402
            + LDH
Sbjct: 303 PNYLDH 308


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,079,910
Number of Sequences: 53049
Number of extensions: 500962
Number of successful extensions: 1264
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1264
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)