Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV1d20r
(845 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 48 1e-07
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 23 2.7
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 3.5
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 3.5
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 23 4.7
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 4.7
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 4.7
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 22 8.2
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 22 8.2
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 22 8.2
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 8.2
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 22 8.2
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 47.6 bits (108), Expect = 1e-07
Identities = 48/179 (26%), Positives = 88/179 (49%), Gaps = 6/179 (3%)
Frame = -3
Query: 828 SNTLFHGGVRVTTRQVFVHPQWNPTLLN----NDVAMIYLPHRVTLNNNIKPIALPNTAD 661
S T + V + +V +HP+++ + ND+A++ + + + P LP
Sbjct: 224 SKTETNATVLHSINKVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGDKVGPACLPFQHF 283
Query: 660 LNNLFVGQWAVAAGYGLTSDAQTGISVNQVMSQVNLQVITVQQCMAVFGSNFVRNSNICT 481
L++ F G G+G TS G+ ++ ++ + L ++T +C +G N + N+ +C
Sbjct: 284 LDS-FAGSDVTVLGWGHTSF--NGM-LSHILQKTTLNMLTQVECYKYYG-NIMVNA-MCA 337
Query: 480 NGAGGVGICRGDSGGPLLLN--RNGVLTLIGISSFVAQNRCQDGFPSAFARVTSFNNFI 310
A G C+ DSGGP+L R L IGI S+ A+ C +P+ +V S+ ++I
Sbjct: 338 Y-AKGKDACQMDSGGPVLWQNPRTKRLVNIGIISWGAE--C-GKYPNGNTKVGSYIDWI 392
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 23.4 bits (48), Expect = 2.7
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +1
Query: 313 EIVETCNSGEGRWESVLASVLG 378
E + C G G W S +A ++G
Sbjct: 3 EKLRICIVGSGNWGSTIAKIIG 24
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 23.0 bits (47), Expect = 3.5
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -3
Query: 639 QWAVAAGYGLTSDAQTGISVNQVMSQVNL 553
QW + G +S + T + VN+ VNL
Sbjct: 421 QWDDSVSAGFSSSSNTWLRVNENYKTVNL 449
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 3.5
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -3
Query: 639 QWAVAAGYGLTSDAQTGISVNQVMSQVNL 553
QW + G +S + T + VN+ VNL
Sbjct: 421 QWDDSVSAGFSSSSNTWLRVNENYKTVNL 449
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 359 SWHLFWATKELIPIKVS 409
SW FW E IP +V+
Sbjct: 231 SWIAFWIKPEAIPARVT 247
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.6 bits (46), Expect = 4.7
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +1
Query: 409 YTITVQQKWSAGVSAANTDTASSVRADV*VPHEVATENGHALLHCDHLQVHLAH 570
YT+TVQ SA V + T+SS+ + H + NG A L L AH
Sbjct: 1397 YTLTVQVPPSAPVLYVTSSTSSSI-----LLHWKSGHNGGASLTGYTLHYRTAH 1445
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.6 bits (46), Expect = 4.7
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +1
Query: 409 YTITVQQKWSAGVSAANTDTASSVRADV*VPHEVATENGHALLHCDHLQVHLAH 570
YT+TVQ SA V + T+SS+ + H + NG A L L AH
Sbjct: 1393 YTLTVQVPPSAPVLYVTSSTSSSI-----LLHWKSGHNGGASLTGYTLHYRTAH 1441
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +2
Query: 359 SWHLFWATKELIPIKVS 409
SW FW + +P +VS
Sbjct: 259 SWVSFWLDQSAVPARVS 275
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +2
Query: 359 SWHLFWATKELIPIKVS 409
SW FW + +P +VS
Sbjct: 259 SWVSFWLDQSAVPARVS 275
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.8 bits (44), Expect = 8.2
Identities = 8/31 (25%), Positives = 15/31 (48%)
Frame = +2
Query: 146 IITSKKIMRPSILRVYFFFSFVAD*SFTYIY 238
+I K++ LR +FF ++ YI+
Sbjct: 153 VILDPKLIAKHYLRTWFFLDLISSIPLDYIF 183
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.8 bits (44), Expect = 8.2
Identities = 8/31 (25%), Positives = 15/31 (48%)
Frame = +2
Query: 146 IITSKKIMRPSILRVYFFFSFVAD*SFTYIY 238
+I K++ LR +FF ++ YI+
Sbjct: 153 VILDPKLIAKHYLRTWFFLDLISSIPLDYIF 183
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.8 bits (44), Expect = 8.2
Identities = 8/31 (25%), Positives = 15/31 (48%)
Frame = +2
Query: 146 IITSKKIMRPSILRVYFFFSFVAD*SFTYIY 238
+I K++ LR +FF ++ YI+
Sbjct: 153 VILDPKLIAKHYLRTWFFLDLISSIPLDYIF 183
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,662
Number of Sequences: 438
Number of extensions: 5052
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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