Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV1d12f
(404 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q1HQK5 Cluster: Cytochrome c oxidase polypeptide VIIC; ... 59 3e-08
UniRef50_Q7JW00 Cluster: LD14731p; n=7; Arthropoda|Rep: LD14731p... 55 5e-07
UniRef50_Q1W2C6 Cluster: Putative mitochondrial cytochrome c oxi... 55 5e-07
UniRef50_P15954 Cluster: Cytochrome c oxidase subunit 7C, mitoch... 51 8e-06
UniRef50_UPI00005189A2 Cluster: PREDICTED: hypothetical protein;... 46 3e-04
UniRef50_A7RPT2 Cluster: Predicted protein; n=1; Nematostella ve... 44 9e-04
UniRef50_Q6C2Y3 Cluster: Yarrowia lipolytica chromosome F of str... 43 0.003
UniRef50_O18687 Cluster: Putative uncharacterized protein; n=2; ... 36 0.23
UniRef50_A7TGF0 Cluster: Putative uncharacterized protein; n=1; ... 36 0.41
UniRef50_UPI0000D999DF Cluster: PREDICTED: hypothetical protein;... 34 1.2
UniRef50_Q9P4W1 Cluster: Cytochrome c oxidase polypeptide VIII, ... 34 1.2
UniRef50_UPI0000E235D0 Cluster: PREDICTED: hypothetical protein;... 33 1.6
UniRef50_P04039 Cluster: Cytochrome c oxidase polypeptide VIII, ... 33 1.6
UniRef50_Q6CWK8 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 32 5.0
UniRef50_UPI00006A212F Cluster: UPI00006A212F related cluster; n... 31 6.6
UniRef50_Q1IIJ0 Cluster: Sugar phosphate isomerase/epimerase pre... 31 8.7
UniRef50_A0E8P1 Cluster: Chromosome undetermined scaffold_83, wh... 31 8.7
UniRef50_A7TME8 Cluster: Putative uncharacterized protein; n=1; ... 31 8.7
>UniRef50_Q1HQK5 Cluster: Cytochrome c oxidase polypeptide VIIC;
n=4; Endopterygota|Rep: Cytochrome c oxidase polypeptide
VIIC - Aedes aegypti (Yellowfever mosquito)
Length = 67
Score = 59.3 bits (137), Expect = 3e-08
Identities = 34/70 (48%), Positives = 42/70 (60%)
Frame = +2
Query: 56 MIGAVARISNRTVGKNVVKTSVRSGSNGGIPGENLPFDINNKARLTFHMFWFFGSGFAAP 235
M A IS RT N+V+ S S+GGIPGENLPF + N+ +LT F GSG AP
Sbjct: 1 MFARAAAIS-RTGMTNLVRYS---HSHGGIPGENLPFSLTNRYKLTALFIVFLGSGLGAP 56
Query: 236 FLVVWHQMRK 265
F V+ HQ+ K
Sbjct: 57 FFVLRHQLLK 66
>UniRef50_Q7JW00 Cluster: LD14731p; n=7; Arthropoda|Rep: LD14731p -
Drosophila melanogaster (Fruit fly)
Length = 66
Score = 55.2 bits (127), Expect = 5e-07
Identities = 25/58 (43%), Positives = 36/58 (62%)
Frame = +2
Query: 92 VGKNVVKTSVRSGSNGGIPGENLPFDINNKARLTFHMFWFFGSGFAAPFLVVWHQMRK 265
+ +N ++ VR +GG+PGENLPF + NK R+T GF +PFL+V HQ+ K
Sbjct: 8 IARNFSQSMVRFSGHGGVPGENLPFGLTNKYRITALFTIGCVLGFGSPFLIVRHQLLK 65
>UniRef50_Q1W2C6 Cluster: Putative mitochondrial cytochrome c
oxidase polypeptide VIIc; n=1; Graphocephala
atropunctata|Rep: Putative mitochondrial cytochrome c
oxidase polypeptide VIIc - Graphocephala atropunctata
Length = 65
Score = 55.2 bits (127), Expect = 5e-07
Identities = 24/56 (42%), Positives = 35/56 (62%)
Frame = +2
Query: 98 KNVVKTSVRSGSNGGIPGENLPFDINNKARLTFHMFWFFGSGFAAPFLVVWHQMRK 265
+N+ + R GGIPG NLPF ++NK +LT +FGSG + PFL++ H + K
Sbjct: 10 RNLSTSLARRSQPGGIPGVNLPFSLDNKFKLTALFVVYFGSGMSVPFLMLRHSLTK 65
>UniRef50_P15954 Cluster: Cytochrome c oxidase subunit 7C,
mitochondrial precursor; n=46; Deuterostomia|Rep:
Cytochrome c oxidase subunit 7C, mitochondrial precursor
- Homo sapiens (Human)
Length = 63
Score = 51.2 bits (117), Expect = 8e-06
Identities = 23/40 (57%), Positives = 27/40 (67%)
Frame = +2
Query: 146 PGENLPFDINNKARLTFHMFWFFGSGFAAPFLVVWHQMRK 265
PG+NLPF + NK L M +FGS FA PFLVV HQ+ K
Sbjct: 23 PGKNLPFSVENKWSLLAKMCLYFGSAFATPFLVVRHQLLK 62
>UniRef50_UPI00005189A2 Cluster: PREDICTED: hypothetical protein;
n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
- Apis mellifera
Length = 71
Score = 46.0 bits (104), Expect = 3e-04
Identities = 27/69 (39%), Positives = 35/69 (50%)
Frame = +2
Query: 59 IGAVARISNRTVGKNVVKTSVRSGSNGGIPGENLPFDINNKARLTFHMFWFFGSGFAAPF 238
I V R R+ V+ S G G PG NLP +I N+ LT FFGSG + PF
Sbjct: 4 IRTVLRNFTRSFKTTTVRKSEDHGPEG-YPGANLPINIQNRYVLTATFILFFGSGLSLPF 62
Query: 239 LVVWHQMRK 265
LV+ + + K
Sbjct: 63 LVLRYHLLK 71
>UniRef50_A7RPT2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 78
Score = 44.4 bits (100), Expect = 9e-04
Identities = 21/44 (47%), Positives = 26/44 (59%)
Frame = +2
Query: 146 PGENLPFDINNKARLTFHMFWFFGSGFAAPFLVVWHQMRKNSNS 277
PG N+PF NK RL M + G+ FA PF+ V QM K +NS
Sbjct: 35 PGLNMPFQTQNKTRLLIVMVAYLGTCFALPFVAVRFQMAKAANS 78
>UniRef50_Q6C2Y3 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome F of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 74
Score = 42.7 bits (96), Expect = 0.003
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +2
Query: 56 MIGAVARISNRTVGKNVVKTSVRSGSNGGIPGENLPFDINN-KARLTFHMFWFFGSGFAA 232
M A R +N +N T VRS P NLPF ++N K F F FF +GF A
Sbjct: 1 MFRATVRSANTVAKRNFSTTKVRSVHYPEGPYHNLPFKVHNRKIPYAFLHFGFFLAGFLA 60
Query: 233 PFLVVW-HQMR 262
PF +V+ H R
Sbjct: 61 PFGIVYVHNKR 71
>UniRef50_O18687 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 84
Score = 36.3 bits (80), Expect = 0.23
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +2
Query: 134 NGGIPGENLPFDINNKARLTFHMFWFFGSGFAAPFLVVWHQMRK 265
N G LPF + NK F GF APF+VV +Q+RK
Sbjct: 38 NDGWASARLPFHVTNKWGFAAKAVTFLAIGFWAPFIVVEYQLRK 81
>UniRef50_A7TGF0 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 218
Score = 35.5 bits (78), Expect = 0.41
Identities = 15/42 (35%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Frame = +2
Query: 155 NLPFDINNKARLTFHMFW--FFGSGFAAPFLVVWHQMRKNSN 274
N+PF ++N+ ++ + + FF GF PFL+ W Q++K+ N
Sbjct: 177 NIPFKVHNR-KIPYAVVHTAFFSVGFLVPFLISWVQLKKSGN 217
>UniRef50_UPI0000D999DF Cluster: PREDICTED: hypothetical protein;
n=2; Macaca mulatta|Rep: PREDICTED: hypothetical protein
- Macaca mulatta
Length = 99
Score = 33.9 bits (74), Expect = 1.2
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -3
Query: 252 CHTTRKGAANPLPKNQNMWKVRRALLLMSNGRFSPG 145
C T RKGAAN PK +++ L NG+F PG
Sbjct: 14 CLTIRKGAANADPKYKHILTSNAHLFFTENGKFFPG 49
>UniRef50_Q9P4W1 Cluster: Cytochrome c oxidase polypeptide VIII,
mitochondrial precursor; n=1; Schizosaccharomyces
pombe|Rep: Cytochrome c oxidase polypeptide VIII,
mitochondrial precursor - Schizosaccharomyces pombe
(Fission yeast)
Length = 66
Score = 33.9 bits (74), Expect = 1.2
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +2
Query: 146 PGENLPFDINNKARLTFHMFWFFGSGFAAPFLVVWHQMR 262
PG +PF IN K T F FG F+ PF+VV + R
Sbjct: 26 PGSTIPFYINKKPLPTLLYFGTFGVIFSIPFIVVKYHNR 64
>UniRef50_UPI0000E235D0 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 80
Score = 33.5 bits (73), Expect = 1.6
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -3
Query: 252 CHTTRKGAANPLPKNQNMWKVRRALLLMSNGRFSPG 145
C TTRKG AN PK +++ L NG+F PG
Sbjct: 14 CLTTRKGVANADPKYKHILASNDHLFSTENGKFFPG 49
>UniRef50_P04039 Cluster: Cytochrome c oxidase polypeptide VIII,
mitochondrial precursor; n=2; Saccharomyces
cerevisiae|Rep: Cytochrome c oxidase polypeptide VIII,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 78
Score = 33.5 bits (73), Expect = 1.6
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 152 ENLPFDINN-KARLTFHMFWFFGSGFAAPFLVVWHQMRKN 268
EN+PF + K F FF GFA PF+ + Q++K+
Sbjct: 36 ENIPFKVKGRKTPYALSHFGFFAIGFAVPFVACYVQLKKS 75
>UniRef50_Q6CWK8 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome B of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=2; Saccharomycetaceae|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 73
Score = 31.9 bits (69), Expect = 5.0
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 155 NLPFDINN-KARLTFHMFWFFGSGFAAPFLVVWHQMRK 265
N+P I+N K F F FF GFA PF+ + Q++K
Sbjct: 32 NIPVKIHNRKIPYAFIHFGFFALGFAVPFISSYVQLKK 69
>UniRef50_UPI00006A212F Cluster: UPI00006A212F related cluster; n=1;
Xenopus tropicalis|Rep: UPI00006A212F UniRef100 entry -
Xenopus tropicalis
Length = 784
Score = 31.5 bits (68), Expect = 6.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 49 NQNDRSSCKDFQQDRWEECRKDQC 120
N DR +C+ +D+W +KDQC
Sbjct: 524 NDTDREACQPCPEDKWPNQKKDQC 547
>UniRef50_Q1IIJ0 Cluster: Sugar phosphate isomerase/epimerase
precursor; n=1; Acidobacteria bacterium Ellin345|Rep:
Sugar phosphate isomerase/epimerase precursor -
Acidobacteria bacterium (strain Ellin345)
Length = 318
Score = 31.1 bits (67), Expect = 8.7
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -2
Query: 151 PGNTA-VGSTPNTGLYDILPNGPVGNPCNCSD 59
PGN A +G TP Y++LP +G+ C+C D
Sbjct: 217 PGNAAAIGDTPFPNGYNLLPKDRIGH-CHCKD 247
>UniRef50_A0E8P1 Cluster: Chromosome undetermined scaffold_83, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_83,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 2787
Score = 31.1 bits (67), Expect = 8.7
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 40 VKENQNDRSSCKDFQQDRWEECRKDQC*EWIQR 138
+++ + +R S K F Q+ W CR D +++QR
Sbjct: 87 IRDYERNRPSFKAFLQNEWTSCRIDDAYDYVQR 119
>UniRef50_A7TME8 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 509
Score = 31.1 bits (67), Expect = 8.7
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 107 VKTSVRSGSNGGIPGENLPFDINNKARLTFHMFWFFGSGFAAPFLVVWHQ 256
V+ V G + G+P LP + N+A L + + W + F +V WH+
Sbjct: 19 VQPQVHHGVSNGLPKALLP--VGNRAMLEYVLDWCDQAAFTEIHVVAWHE 66
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 380,528,911
Number of Sequences: 1657284
Number of extensions: 7531437
Number of successful extensions: 16815
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 16438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16809
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17773009086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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