Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV1d02f
         (616 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   1.5  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   2.0  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           23   2.7  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   2.7  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   2.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   6.2  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   6.2  

>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -3

Query: 308 DNSSIPTSGSVFDCLVASSTSLRTL 234
           DN   P  G++F  L++  T LRTL
Sbjct: 493 DNRRKPKPGTIFAKLLSVLTELRTL 517



 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 127 LSSDTTCRGPTSNDQSNGTSPS 62
           L+S ++  G T+N  SNG S S
Sbjct: 64  LASGSSLNGLTNNVPSNGLSSS 85


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 473 FVIFFNCGIYMAIPLVEIIYFCNGNTICYLR 565
           F++FF  G+   I  +  +Y C+ N   +LR
Sbjct: 142 FILFFAQGLTSPIFNLVYVYCCDNNFNVFLR 172


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +1

Query: 4   EAARFAIEYCNAGKGPLVMEMETYRYSGHSMSDPGTS 114
           E  R A+EY  + +  L ++  T   S  S+  P T+
Sbjct: 102 ETLRMAVEYIRSLEDLLALDESTVSSSTSSIPSPSTT 138


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +1

Query: 277 TEPEVGIEELSADIYYKNLEPFVRGI 354
           T+P + +  +SAD+Y   ++ F+  I
Sbjct: 348 TQPMLVLNSVSADVYNLEIQRFIHQI 373


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +1

Query: 277 TEPEVGIEELSADIYYKNLEPFVRGI 354
           T+P + +  +SAD+Y   ++ F+  I
Sbjct: 348 TQPMLVLNSVSADVYNLEIQRFIHQI 373


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -1

Query: 136 APRLSSDTTCRGPTSNDQSNGTSPS 62
           +P ++  +T  G T  + +NG+SPS
Sbjct: 703 SPSVTDLSTKDGTTVPESNNGSSPS 727


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 302 SCPPIYTTRTWNPSSVAS 355
           + PP  TT + +P+SVAS
Sbjct: 32  AAPPPATTSSGSPASVAS 49


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,369
Number of Sequences: 336
Number of extensions: 3483
Number of successful extensions: 17
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)