Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV1d02f
(616 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0689 - 30937621-30937665,30938143-30938208,30938303-309383... 119 2e-27
06_01_0981 + 7613381-7614086,7614203-7614282,7614883-7614960,761... 109 2e-24
04_01_0110 + 1123238-1123450,1124211-1124997,1126126-1126403 73 2e-13
12_01_0535 + 4208410-4208661,4209529-4209627,4210125-4210265,421... 58 4e-09
12_02_0759 - 22882435-22882731 31 0.96
09_04_0744 - 19867604-19867686,19868075-19869872,19870777-198708... 30 1.3
08_02_0944 + 22868885-22870387 29 2.2
06_02_0155 + 12380452-12381012 29 2.2
12_01_1051 - 10806183-10806540,10807973-10808043 29 2.9
06_03_1259 - 28800954-28802468 29 2.9
03_06_0296 + 32901696-32901892,32901989-32902232,32903992-329041... 29 2.9
04_03_0367 + 14970511-14970697,14970862-14970869 29 3.9
01_05_0270 - 20271859-20272866,20273043-20273058,20273455-202737... 29 3.9
11_06_0437 - 23533218-23536382 28 5.1
08_02_1050 + 23949828-23949981,23950083-23950534,23951599-239516... 28 5.1
08_02_0274 - 15192670-15192983,15193110-15193200,15193295-151936... 28 5.1
07_03_1649 - 28385289-28385358,28387039-28387877 28 5.1
03_02_0797 - 11296426-11297258,11297745-11297901 28 5.1
10_08_0295 - 16581014-16583071 28 6.8
06_02_0200 - 12946139-12946282,12947636-12947842,12949506-129496... 28 6.8
01_06_1430 - 37309737-37309946,37310049-37310100,37310348-373104... 28 6.8
06_03_0635 - 22971502-22973840,22974112-22974403,22974639-229751... 27 8.9
06_01_0321 + 2328932-2328963,2329084-2329243,2329388-2329576,233... 27 8.9
04_01_0576 + 7466032-7466802,7468382-7468444,7469043-7469122,746... 27 8.9
03_05_0815 + 27917516-27917767,27918024-27918110,27918281-279183... 27 8.9
03_02_1023 + 13265179-13265330,13265526-13265637,13265752-132660... 27 8.9
>02_05_0689 -
30937621-30937665,30938143-30938208,30938303-30938356,
30938489-30938560,30938648-30938743,30939883-30939960,
30940485-30940564,30940662-30941343
Length = 390
Score = 119 bits (286), Expect = 2e-27
Identities = 55/108 (50%), Positives = 77/108 (71%)
Frame = +1
Query: 4 EAARFAIEYCNAGKGPLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEK 183
+A +FA E+ A GP+V+EM+TYRY GHSMSDPG++YRTRDE+ VRQ RDPI ++
Sbjct: 265 QACKFAKEHAIAN-GPIVLEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERVRKL 323
Query: 184 ILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSADIYYK 327
IL H+L T +LKD++ ++RKEVD+A ++K P EL ++Y K
Sbjct: 324 ILAHDLATAAELKDMEKEIRKEVDDAIAKAKESPMPDTSELFTNVYVK 371
>06_01_0981 +
7613381-7614086,7614203-7614282,7614883-7614960,
7615166-7615261,7615370-7615441,7615676-7615729,
7615819-7615884,7616291-7616335
Length = 398
Score = 109 bits (261), Expect = 2e-24
Identities = 50/115 (43%), Positives = 77/115 (66%), Gaps = 2/115 (1%)
Frame = +1
Query: 4 EAARFAIEYCNAGKGPLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEK 183
+A +FA ++ GP+++EM+TYRY GHSMSDPG++YRTRDE+ +RQ RDPI ++
Sbjct: 273 QACKFAKQHA-LENGPIILEMDTYRYHGHSMSDPGSTYRTRDEIAGIRQERDPIERVRKL 331
Query: 184 ILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSADIYYKN--LEPF 342
+L H+ T +LKD++ ++RK+VD A ++K P EL ++Y + LE F
Sbjct: 332 LLAHDFATTQELKDMEKEIRKQVDTAIAKAKESPMPDPSELFTNVYVNDCGLESF 386
>04_01_0110 + 1123238-1123450,1124211-1124997,1126126-1126403
Length = 425
Score = 72.9 bits (171), Expect = 2e-13
Identities = 38/94 (40%), Positives = 54/94 (57%)
Frame = +1
Query: 4 EAARFAIEYCNAGKGPLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEK 183
E A+ AIE G+GP ++E ETYR+ GHS++DP R DE RDPIT+ K+
Sbjct: 294 EVAKEAIERARRGEGPTLVECETYRFRGHSLADP-DELRRPDEKSHY-AARDPITALKKY 351
Query: 184 ILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEP 285
I+ L T +LK I+ K+ V+EA + + P
Sbjct: 352 IIEQNLATESELKSIEKKIDDVVEEAVEFADASP 385
>12_01_0535 +
4208410-4208661,4209529-4209627,4210125-4210265,
4210378-4210560,4210664-4210821,4210905-4211004,
4211085-4211196,4211241-4211419,4211489-4211674,
4211762-4211929
Length = 525
Score = 58.4 bits (135), Expect = 4e-09
Identities = 28/91 (30%), Positives = 51/91 (56%)
Frame = +1
Query: 49 PLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDI 228
P+++E TYR HS SD T YR DE++ R RDPI+ +++ + + + ++
Sbjct: 404 PILVEALTYRVGHHSTSDDSTKYRPVDEIEHWRTARDPISRYRKWVQGNGWWCDEDESEL 463
Query: 229 DAKVRKEVDEATKQSKTEPEVGIEELSADIY 321
VR+E+ +A + ++ P+ + EL D+Y
Sbjct: 464 RNNVRQELLKAIQVAERMPKPPLAELFTDVY 494
>12_02_0759 - 22882435-22882731
Length = 98
Score = 30.7 bits (66), Expect = 0.96
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 18 RHRVLQRRERSFGDGDGDVPLLWSFDVGPRHVVSDERRGAGG 143
RH +++R +R GD V + GP+H + RRG GG
Sbjct: 45 RHHLVERGQRRRGDRGAGVLGADRVEEGPQHGGGERRRGRGG 86
>09_04_0744 -
19867604-19867686,19868075-19869872,19870777-19870801,
19872313-19872710
Length = 767
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = -2
Query: 180 LLERSDGVSGLPHLLHLVSRPIRRAGVRHRMTRV 79
LL+ DG+SG+PHL +L +++ G + + +
Sbjct: 691 LLDSKDGLSGVPHLTNLNELLVKKCGEKENLMEI 724
>08_02_0944 + 22868885-22870387
Length = 500
Score = 29.5 bits (63), Expect = 2.2
Identities = 25/72 (34%), Positives = 33/72 (45%)
Frame = +1
Query: 157 DPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSADIYYKNLE 336
D IT+ E + L P ++ AKVR E+D A KT E I L Y + +
Sbjct: 301 DTITATVEWAMAELLRNPSEM----AKVRAEMDGALGGKKTVDEPDIARLP---YLQAVV 353
Query: 337 PFVRGIHPAAPL 372
+HPAAPL
Sbjct: 354 KEAMRLHPAAPL 365
>06_02_0155 + 12380452-12381012
Length = 186
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 160 GLWSASPPAPRLSSDTTCRGPTSNDQ 83
G A+PPAP S DT R PT D+
Sbjct: 50 GNGGAAPPAPATSPDTEVRAPTYGDK 75
>12_01_1051 - 10806183-10806540,10807973-10808043
Length = 142
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +3
Query: 3 GGGQVRHRVLQRRERSFGDGDGDVPLLWSFDVGPRHVVSDER--RGAGG 143
G G+ R R L RR RS G G GD + G +H + R RG+GG
Sbjct: 74 GRGRNRTRRLWRRGRSSGSGGGDAA---AVHAGKKHRLRRRRRIRGSGG 119
>06_03_1259 - 28800954-28802468
Length = 504
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -2
Query: 183 LLLERSDGVSGLPHLLHLVSRPIRRAGVRHRMTRVTVRLHLHHQRTFPCVAVLD 22
+L++ +DG SG + L+ S+ G R T TVRLH HQ P ++ D
Sbjct: 54 ILIDEADGASGGANDLYDASQLY--LGARCLATAPTVRLHKPHQAPRPVASLPD 105
>03_06_0296 +
32901696-32901892,32901989-32902232,32903992-32904112,
32904219-32904406
Length = 249
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 57 DGDGDVPLLWSFDVGPRHVVSDE 125
D DG VP W D R VVSD+
Sbjct: 148 DADGSVPFYWGVDPDSRLVVSDD 170
>04_03_0367 + 14970511-14970697,14970862-14970869
Length = 64
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 69 DVPLLWSFDVGPRHVVSDERRGAGGEADQR 158
D+PL W V P E RGAGG+ ++R
Sbjct: 11 DLPLAWPGRVDPPLAGLGEGRGAGGDEEER 40
>01_05_0270 -
20271859-20272866,20273043-20273058,20273455-20273756,
20273932-20274231
Length = 541
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1
Query: 127 DEVQEVRQTRDPITSFKEKI-LNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEE 303
++ VR R T F E + ++ +++ +++K KE K + E GIE
Sbjct: 105 EQKPNVRYMRQITTKFSESMDISQQVIQQAHFVKMESKKEKEYFSVKKCQELAFECGIEH 164
Query: 304 LSADIY 321
SA++Y
Sbjct: 165 DSAEVY 170
>11_06_0437 - 23533218-23536382
Length = 1054
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 196 ELVTPDQL-KDIDAKVRKEVDEATKQSKTEPEVGIEELSADIYYKNLEPF 342
+LV P+ + +D+ RK VD K + ++ +E ADI +K EP+
Sbjct: 166 KLVEPNLVGRDVVHACRKLVDLVIKNKEKTADIENKEKKADIEHKKKEPY 215
>08_02_1050 +
23949828-23949981,23950083-23950534,23951599-23951631,
23952069-23952179,23953175-23953348
Length = 307
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1
Query: 70 SPSPSPKDLSLRCSTRWRTWPPP 2
SPSPSP L R +R WPPP
Sbjct: 25 SPSPSPSPLLSRAPSR--RWPPP 45
>08_02_0274 -
15192670-15192983,15193110-15193200,15193295-15193603,
15193859-15193944,15196034-15196088,15196689-15196757,
15197027-15197074,15198090-15198203,15198464-15198526,
15199236-15199427,15199519-15199643,15199723-15199779,
15200209-15200332,15200478-15200543,15200656-15200738,
15200916-15201036,15201663-15201773,15201841-15201936,
15202032-15202107,15202878-15203016,15203283-15203346,
15203454-15203527,15203845-15203923,15204473-15204547
Length = 876
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 118 RTRDEVQEVRQTRDPITSFKEKILN-HELVTPDQLKDIDAKVR 243
RTRDE+ +V++ +D +T +K+ + E PD +I V+
Sbjct: 546 RTRDELMDVQRIKDAMTQIYQKLQDIKESAQPDVRHEISQLVK 588
>07_03_1649 - 28385289-28385358,28387039-28387877
Length = 302
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = -2
Query: 141 LLHLVSRPIRRAGVRHRMT-RVT-VRLHL 61
++HLVS P+ A V HR T R++ V LHL
Sbjct: 43 VVHLVSTPVNLAAVAHRRTDRISLVELHL 71
>03_02_0797 - 11296426-11297258,11297745-11297901
Length = 329
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = -1
Query: 160 GLWSASPPAPRLSSDTTCRGPTSNDQSNGTSPS-PSPKD 47
G S PAP LSS T S D G PS P+ D
Sbjct: 206 GAQSGGTPAPELSSTTAGSSSLSTDSGAGAQPSWPTQAD 244
>10_08_0295 - 16581014-16583071
Length = 685
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/50 (28%), Positives = 20/50 (40%)
Frame = -1
Query: 154 WSASPPAPRLSSDTTCRGPTSNDQSNGTSPSPSPKDLSLRCSTRWRTWPP 5
W+ PP P S + G S+D S+ P P+ + T PP
Sbjct: 228 WTPGPPHPPCSPSSGVSGLPSSDSSDSGGPIPTVRTFQWYLGCADGTQPP 277
>06_02_0200 -
12946139-12946282,12947636-12947842,12949506-12949629,
12950167-12950369,12950922-12951620,12951723-12951784,
12952395-12952404,12954905-12957631
Length = 1391
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 8/51 (15%)
Frame = -1
Query: 157 LWSASPPAPRLSSDTTCRGPTSNDQSNGT--------SPSPSPKDLSLRCS 29
LWS SPP+ +++ ++GT PSPSP+ SL C+
Sbjct: 9 LWSPSPPSHHITAAAATPAALFTGAADGTILHWPLLPPPSPSPRPSSLLCA 59
>01_06_1430 -
37309737-37309946,37310049-37310100,37310348-37310427,
37310538-37310606,37310710-37310843,37311173-37311332,
37311483-37311554,37312113-37312246,37312386-37312521,
37313273-37313416
Length = 396
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +1
Query: 127 DEVQEVRQTRDPITSFKEKILNHE---LVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGI 297
D RQ D + K +N E V PD+ +++A++ + +EATK+ + V
Sbjct: 288 DRANAFRQHHDLFQQKEYKGVNLEKLKFVNPDKFSELEAELTADSEEATKRFEHIVAVMN 347
Query: 298 EELS 309
EEL+
Sbjct: 348 EELA 351
>06_03_0635 -
22971502-22973840,22974112-22974403,22974639-22975162,
22975314-22975583,22976393-22977124,22977226-22977310
Length = 1413
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +3
Query: 99 GPRHVVSDERRGAGGEADQRPHHFVQGEDLESRARHARSAQGYRRQG 239
G V R G GG+ RP + + RA AR +RRQG
Sbjct: 75 GAEPAVRRVRGGVGGQQGARPQRRRRQDGAAVRAGDARQRPWHRRQG 121
>06_01_0321 +
2328932-2328963,2329084-2329243,2329388-2329576,
2330406-2330517,2331395-2331474,2332022-2332132,
2332580-2332666,2332979-2333260,2333804-2333965
Length = 404
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 190 NHELVTPDQ-LKDIDAKVRKEVDEATKQSKTEPEVGIEELSADIYYKNLEP 339
N ELV D+ K + +K+VD + KT P GIE +D+ K P
Sbjct: 156 NKELVESDEDQKKPHKEHQKQVDRS--HIKTSPSAGIEAKHSDVTSKQFSP 204
>04_01_0576 +
7466032-7466802,7468382-7468444,7469043-7469122,
7469505-7469622,7470035-7470067,7470400-7470474,
7470887-7471043,7471142-7471230,7472041-7472294,
7472977-7473148,7473250-7473333,7473626-7473730,
7474055-7474363,7474622-7474756,7476236-7476317,
7476423-7476502,7476622-7476783,7477071-7477138,
7478422-7478502,7478634-7478760,7478816-7478879,
7480808-7480854,7481042-7481335
Length = 1149
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = -1
Query: 157 LWSASPPAPRLSSDTTCRGPTSNDQSNGTSPSPSPKDLSLRCSTRWRTWPPP 2
L + S + LS+D+ P + T+ +P + S W TWPPP
Sbjct: 7 LRTTSASSSTLSTDSPNSAPPGGVPQSITALLNNPLPSASSSSYYWLTWPPP 58
>03_05_0815 +
27917516-27917767,27918024-27918110,27918281-27918394,
27919644-27919835,27919925-27921677,27921771-27922708,
27923587-27923859
Length = 1202
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 61 EMETYRYSGHS-MSDPGTSYRTRDEVQEVRQTRDPITS 171
E ET + S HS + DP T Y R+E+ V Q D TS
Sbjct: 452 ERETQQLSEHSQIEDPDTFYH-REELSLVEQKEDHTTS 488
>03_02_1023 +
13265179-13265330,13265526-13265637,13265752-13266048,
13266361-13266623,13267637-13267847,13268420-13268590,
13268671-13268748,13269275-13269520,13269763-13271868,
13272122-13273904,13274113-13274216,13274752-13275108,
13275210-13275328,13276175-13276436,13276669-13276893,
13277075-13277214,13278087-13278159,13278431-13278532,
13278647-13279018,13279183-13279230,13279516-13279900,
13280440-13280558
Length = 2574
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 133 VQEVRQ-TRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQ 270
V E+R R P+T ILNH + Q+ D+D +R+ A K+
Sbjct: 96 VGEIRLGLRRPLTQLGFTILNHGPILQLQISDLDIVLRQPAKSAKKK 142
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,323,438
Number of Sequences: 37544
Number of extensions: 384097
Number of successful extensions: 1709
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1706
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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