Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV1d02f
         (616 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           28   0.28 
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           28   0.28 
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    27   0.48 
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    27   0.64 
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    25   1.9  
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           25   2.6  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           25   2.6  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           25   2.6  
AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    24   3.4  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   7.8  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   7.8  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   7.8  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           23   7.8  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   7.8  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   7.8  

>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 27.9 bits (59), Expect = 0.28
 Identities = 16/51 (31%), Positives = 23/51 (45%)
 Frame = -1

Query: 154 WSASPPAPRLSSDTTCRGPTSNDQSNGTSPSPSPKDLSLRCSTRWRTWPPP 2
           WS  PP P  ++ T    PT+      T+P+P+        +T W   PPP
Sbjct: 174 WSDQPPPPTTTTTTVWTDPTATT----TTPAPT-------TTTTWSDLPPP 213


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 27.9 bits (59), Expect = 0.28
 Identities = 16/51 (31%), Positives = 23/51 (45%)
 Frame = -1

Query: 154 WSASPPAPRLSSDTTCRGPTSNDQSNGTSPSPSPKDLSLRCSTRWRTWPPP 2
           WS  PP P  ++ T    PT+      T+P+P+        +T W   PPP
Sbjct: 174 WSDQPPPPTTTTTTVWTDPTATT----TTPAPT-------TTTTWSDLPPP 213



 Score = 23.0 bits (47), Expect = 7.8
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -1

Query: 154 WSASPPAPRLSSDTTCRGPTSNDQSNGTSPSPSPKDL 44
           WS  PP P  ++ T    PT+   ++  + + +  DL
Sbjct: 207 WSDLPPPPPTTTTTVWIDPTATTTTHAPTTTTTWSDL 243


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 27.1 bits (57), Expect = 0.48
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -1

Query: 148 ASPPAPRLSSDTTCRGPTSNDQSNGTSPSPSPKDLSLRCSTR 23
           ++P +PRL+  +TC  P S+  S  +S   +P   +  CSTR
Sbjct: 49  STPSSPRLAQASTCPVPCSSIWSRPSSMRCAPA-RTASCSTR 89


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 26.6 bits (56), Expect = 0.64
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +3

Query: 120  DERRGAGGEADQRPHHFVQGEDLESRARHARSAQGYRRQGT*RSRR 257
            DER       +++  HF +  DLE+R    R A+  RR  + R+ R
Sbjct: 1013 DERAALAAHGNEQ--HFEEVADLEARRAEIRRARNDRRNASRRAAR 1056


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -1

Query: 154 WSASPPAPRLSSDTTCRGPTSNDQSNGTSPSPSPKDL 44
           WS  PP P  ++ T    PT+   ++  + + +  DL
Sbjct: 174 WSDQPPPPTTTTTTVWTDPTATTTTHAPTTTTTWSDL 210



 Score = 23.0 bits (47), Expect = 7.8
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -1

Query: 154 WSASPPAPRLSSDTTCRGPTSNDQSNGTSPSPSPKDL 44
           WS  PP P  ++ T    PT+   ++  + + +  DL
Sbjct: 207 WSDLPPPPPTTTTTVWIDPTATTTTHAPTTTTTWSDL 243


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = -1

Query: 154 WSASPPAPRLSSDTTCRGPTSNDQSNGTSPSPSPKDLSLRCSTRWRTWPPP 2
           WS  PP P  ++ T    PT+      T+P+ +        +T W   PPP
Sbjct: 173 WSDQPPPPTTTTTTVWTDPTATT----TTPASTT-------TTTWSDLPPP 212



 Score = 23.0 bits (47), Expect = 7.8
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -1

Query: 154 WSASPPAPRLSSDTTCRGPTSNDQSNGTSPSPSPKDL 44
           WS  PP P  ++ T    PT+   ++  + + +  DL
Sbjct: 206 WSDLPPPPPTTTTTVWIDPTATTTTHAPTTTTTWSDL 242


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -1

Query: 154 WSASPPAPRLSSDTTCRGPTSNDQSNGTSPSPSPKDL 44
           WS  PP P  ++ T    PT+   +  ++ + +  DL
Sbjct: 173 WSDQPPPPTTTTTTVWTDPTATTTTPASTTTTTWSDL 209


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = -1

Query: 154 WSASPPAPRLSSDTTCRGPTSNDQSNGTSPSPSPKDLSLRCSTRWRTWPPP 2
           WSA P      SD   R PT+   +  T P+ +    +   +T W   PPP
Sbjct: 165 WSA-PTTTTTWSDQP-RPPTTTTTTVWTDPTATTTTHAPTTTTTWSDLPPP 213


>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
 Frame = +2

Query: 470 TFVIFFNCGIYMAIPLVEIIYFCN-GNTICY 559
           T      CG Y+ +   ++  FC  GN I Y
Sbjct: 314 TMADLLGCGFYLLVMTSQVFIFCYVGNEISY 344


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +3

Query: 351 HPPGCPAQTP*GPTSQPLKPQYRLYLHHTQYSY 449
           HP     Q+   P+SQ  +P ++ + HH  + +
Sbjct: 259 HPSSHQQQSQQHPSSQHQQPTHQTHHHHHHHQH 291


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +3

Query: 351 HPPGCPAQTP*GPTSQPLKPQYRLYLHHTQYSY 449
           HP     Q+   P+SQ  +P ++ + HH  + +
Sbjct: 259 HPSSHQQQSQQHPSSQHQQPTHQTHHHHHHHQH 291


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +3

Query: 351 HPPGCPAQTP*GPTSQPLKPQYRLYLHHTQYSY 449
           HP     Q+   P+SQ  +P ++ + HH  + +
Sbjct: 211 HPSSHQQQSQQHPSSQHQQPTHQTHHHHHHHQH 243


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -1

Query: 154 WSASPPAPRLSSDTTCRGPTSNDQSNGTSPSPSPKDL 44
           WS  PP P  ++ T    PT+   ++  + + +  DL
Sbjct: 207 WSDLPPPPPTTTTTVWIDPTATTTTHAPTTTTTWSDL 243


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 16/70 (22%), Positives = 34/70 (48%)
 Frame = +1

Query: 127 DEVQEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEEL 306
           D+   + + R+    F +KI   ++   ++  +IDAK  +  D+  K     P++ I   
Sbjct: 161 DQSVAMNRRREDQEDFVKKIDMVKVKDTEKANEIDAKAHEGKDDKIKPYDRIPQIFI--- 217

Query: 307 SADIYYKNLE 336
            A ++++N E
Sbjct: 218 CATMWHENKE 227


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 114  RRAGVRHRMTRVTVRLHLHHQR 49
            RRA +R RM R+  R H  HQ+
Sbjct: 1086 RRANIRARMARLRQR-HRQHQQ 1106


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 660,992
Number of Sequences: 2352
Number of extensions: 12837
Number of successful extensions: 52
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)