Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV1d02f
(616 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47812-8|CAD59156.1| 414|Caenorhabditis elegans Hypothetical pr... 148 3e-36
Z47812-7|CAA87793.1| 397|Caenorhabditis elegans Hypothetical pr... 148 3e-36
AL021480-5|CAJ21557.1| 432|Caenorhabditis elegans Hypothetical ... 50 1e-06
AL021480-4|CAA16329.2| 431|Caenorhabditis elegans Hypothetical ... 50 1e-06
AF025461-8|AAB71000.1| 286|Caenorhabditis elegans Hypothetical ... 39 0.003
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 32 0.28
AL031621-3|CAA20935.2| 740|Caenorhabditis elegans Hypothetical ... 32 0.28
AF039040-6|AAB94185.2| 1029|Caenorhabditis elegans Hypothetical ... 32 0.37
Z75711-6|CAB00037.3| 387|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z81453-4|CAB03794.1| 283|Caenorhabditis elegans Hypothetical pr... 29 3.5
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 29 3.5
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 29 3.5
AC025724-9|AAG23382.1| 77|Caenorhabditis elegans Hypothetical ... 29 3.5
AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical... 29 3.5
Z77657-6|CAB01150.2| 607|Caenorhabditis elegans Hypothetical pr... 28 4.6
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 4.6
AF043704-3|AAK21473.2| 823|Caenorhabditis elegans Sulfate perme... 28 4.6
U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like p... 28 6.1
AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like ... 28 6.1
AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like ... 28 6.1
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z80215-6|CAD56562.2| 1052|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z80215-5|CAB02273.3| 1049|Caenorhabditis elegans Hypothetical pr... 27 8.1
>Z47812-8|CAD59156.1| 414|Caenorhabditis elegans Hypothetical
protein T05H10.6b protein.
Length = 414
Score = 148 bits (359), Expect = 3e-36
Identities = 69/116 (59%), Positives = 89/116 (76%)
Frame = +1
Query: 4 EAARFAIEYCNAGKGPLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEK 183
EA ++A EYC++GKGPL+MEM TYRY GHSMSDPGTSYRTR+E+QEVR+TRDPIT FK++
Sbjct: 275 EATKWAKEYCDSGKGPLMMEMATYRYHGHSMSDPGTSYRTREEIQEVRKTRDPITGFKDR 334
Query: 184 ILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSADIYYKNLEPFVRG 351
I+ L T ++LK ID +VRKEVDEA K + ++ + E L ADIY+ +RG
Sbjct: 335 IITSSLATEEELKAIDKEVRKEVDEALKIATSDGVLPPEALYADIYHNTPAQEIRG 390
>Z47812-7|CAA87793.1| 397|Caenorhabditis elegans Hypothetical
protein T05H10.6a protein.
Length = 397
Score = 148 bits (359), Expect = 3e-36
Identities = 69/116 (59%), Positives = 89/116 (76%)
Frame = +1
Query: 4 EAARFAIEYCNAGKGPLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEK 183
EA ++A EYC++GKGPL+MEM TYRY GHSMSDPGTSYRTR+E+QEVR+TRDPIT FK++
Sbjct: 258 EATKWAKEYCDSGKGPLMMEMATYRYHGHSMSDPGTSYRTREEIQEVRKTRDPITGFKDR 317
Query: 184 ILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSADIYYKNLEPFVRG 351
I+ L T ++LK ID +VRKEVDEA K + ++ + E L ADIY+ +RG
Sbjct: 318 IITSSLATEEELKAIDKEVRKEVDEALKIATSDGVLPPEALYADIYHNTPAQEIRG 373
>AL021480-5|CAJ21557.1| 432|Caenorhabditis elegans Hypothetical
protein Y39E4A.3b protein.
Length = 432
Score = 50.0 bits (114), Expect = 1e-06
Identities = 28/91 (30%), Positives = 44/91 (48%)
Frame = +1
Query: 49 PLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDI 228
P+++E TYR HS SD T+YR+ DEVQ PIT FK+ I ++ +
Sbjct: 307 PVLIEAMTYRLGHHSTSDDSTAYRSSDEVQTWGDKDHPITRFKKYITERGWWNEEKEMEW 366
Query: 229 DAKVRKEVDEATKQSKTEPEVGIEELSADIY 321
+V+K V ++ + +L D+Y
Sbjct: 367 QKEVKKRVLTEFAAAEKRKKAHYHDLFEDVY 397
>AL021480-4|CAA16329.2| 431|Caenorhabditis elegans Hypothetical
protein Y39E4A.3a protein.
Length = 431
Score = 50.0 bits (114), Expect = 1e-06
Identities = 28/91 (30%), Positives = 44/91 (48%)
Frame = +1
Query: 49 PLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDI 228
P+++E TYR HS SD T+YR+ DEVQ PIT FK+ I ++ +
Sbjct: 306 PVLIEAMTYRLGHHSTSDDSTAYRSSDEVQTWGDKDHPITRFKKYITERGWWNEEKEMEW 365
Query: 229 DAKVRKEVDEATKQSKTEPEVGIEELSADIY 321
+V+K V ++ + +L D+Y
Sbjct: 366 QKEVKKRVLTEFAAAEKRKKAHYHDLFEDVY 396
>AF025461-8|AAB71000.1| 286|Caenorhabditis elegans Hypothetical
protein M01D1.9 protein.
Length = 286
Score = 38.7 bits (86), Expect = 0.003
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = +1
Query: 187 LNH--ELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSADIYYK-NLEPFVRGIH 357
LNH +++P + V E DEA +S +E E + +Y+K ++PF + I+
Sbjct: 102 LNHFLSIISPSNIDLFHFPVYNEFDEAQFKSLSECLESHEIYNLHVYWKFEMDPFFKVIN 161
Query: 358 PAAPLKHLEVQPRNH 402
P KHL++ P H
Sbjct: 162 AFLPTKHLKIHPTFH 176
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 32.3 bits (70), Expect = 0.28
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +1
Query: 166 TSFKEKILNHELVTPDQLKDIDAKV-RKEVDEATKQSKTEPEVGIEELSADIYYKNLE 336
TS +++N ++L++ +V K+V+ TKQ+K E E + + ++YYKNL+
Sbjct: 261 TSDLNEVVNALYEGFEELQEEKLRVLSKQVERKTKQAKVEEERKLIDQQNEVYYKNLK 318
>AL031621-3|CAA20935.2| 740|Caenorhabditis elegans Hypothetical
protein F28H6.6 protein.
Length = 740
Score = 32.3 bits (70), Expect = 0.28
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +1
Query: 142 VRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSADIY 321
+RQTR+ + + +L + K A ++KE + TK +K E I EL +
Sbjct: 361 IRQTRETLDIELQIMLKDSINPKSHAKTFAALLKKERETRTKHAKVFMEAKINELDMGNF 420
Query: 322 YKNLEPF 342
Y+ + F
Sbjct: 421 YETYDSF 427
>AF039040-6|AAB94185.2| 1029|Caenorhabditis elegans Hypothetical
protein T22B11.5 protein.
Length = 1029
Score = 31.9 bits (69), Expect = 0.37
Identities = 18/86 (20%), Positives = 42/86 (48%)
Frame = +1
Query: 19 AIEYCNAGKGPLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHE 198
A ++ K +++++ YR GH+ D + Q ++QT+ + ++EKILN
Sbjct: 494 AADWRKTFKKDVIVDLVCYRRHGHNELDE-PMFTQPLMYQRIKQTKTALEKYQEKILNEG 552
Query: 199 LVTPDQLKDIDAKVRKEVDEATKQSK 276
+ +K+ K +++A + ++
Sbjct: 553 VANEQYVKEELTKYGSILEDAYENAQ 578
>Z75711-6|CAB00037.3| 387|Caenorhabditis elegans Hypothetical
protein K02B12.8 protein.
Length = 387
Score = 30.7 bits (66), Expect = 0.86
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +3
Query: 120 DERRGAGGEADQRPHHFVQGEDLESRARHARSAQGYRRQGT*RSRR 257
D GG + R HHF Q + A++ RSA G+ RQ RR
Sbjct: 318 DSSLPTGGGSAIRVHHFKQNSRITPIAQNRRSAAGFDRQQIQEMRR 363
>Z81453-4|CAB03794.1| 283|Caenorhabditis elegans Hypothetical
protein B0250.6 protein.
Length = 283
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 467 NTFVIFFNCGIYMAIPLVEIIYFCNGNTICYLR 565
N +++F CG + PL + YFC N+ CY R
Sbjct: 139 NQYMLFGYCGNVLETPLECVNYFCAVNS-CYYR 170
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 28.7 bits (61), Expect = 3.5
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Frame = +1
Query: 136 QEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEV-DEATKQSKTEP-EVGIEELS 309
Q ++ + IT+F+ K+ +T ++ K A+V ++ D A S+ + V EEL+
Sbjct: 1238 QRPQEALNVITAFEAKL---NKLTEERNKMRKARVALDLSDSAHAPSEGDKLTVATEELA 1294
Query: 310 A--DIYYKNLEPFVRGIHPAAPLKHLEVQPR 396
A D++ K L+P GI A L VQPR
Sbjct: 1295 AMKDVW-KALQPVYTGIDEAKEKTWLSVQPR 1324
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 28.7 bits (61), Expect = 3.5
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Frame = +1
Query: 136 QEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEV-DEATKQSKTEP-EVGIEELS 309
Q ++ + IT+F+ K+ +T ++ K A+V ++ D A S+ + V EEL+
Sbjct: 1238 QRPQEALNVITAFEAKL---NKLTEERNKMRKARVALDLSDSAHAPSEGDKLTVATEELA 1294
Query: 310 A--DIYYKNLEPFVRGIHPAAPLKHLEVQPR 396
A D++ K L+P GI A L VQPR
Sbjct: 1295 AMKDVW-KALQPVYTGIDEAKEKTWLSVQPR 1324
>AC025724-9|AAG23382.1| 77|Caenorhabditis elegans Hypothetical
protein Y67D8C.1 protein.
Length = 77
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +1
Query: 184 ILNHELVTP--DQLKDIDAKVRKEVDEATKQSKTEPE 288
I N + TP DQ+KDID+K +K + T + K EP+
Sbjct: 8 IENTHVTTPIIDQIKDIDSKNKKNIQ--TVREKNEPK 42
>AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical
protein Y51H7C.13 protein.
Length = 344
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = -1
Query: 142 PPAPRLSSDTTCRGPTSNDQSNGTSPSPSPKDLSLRCSTR-WRTWPP 5
PP ++ TT R P + T P+P P L +T+ TWPP
Sbjct: 137 PPTTTTTTTTTTRPPCPYPPATNTPPAPEP-TLPYEYTTQPPATWPP 182
>Z77657-6|CAB01150.2| 607|Caenorhabditis elegans Hypothetical
protein F08H9.1 protein.
Length = 607
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +1
Query: 79 YSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHEL--VTPDQLKDIDAKVRKEV 252
YS DP YR +V +++ +PI F K N ++ + + + D+ + +V
Sbjct: 357 YSSLHFKDPEPLYRKTSKVMNLKELLNPIPYFLRKGCNTDMWDLFKVKTRKFDSTIGHDV 416
Query: 253 DEATKQSKTEPEVGIEELSADI 318
+ ++ + E L A++
Sbjct: 417 SDTEEEDEDEETERRNRLKAEL 438
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = -1
Query: 151 SASPPAPRLSSDTTCRGPTSNDQSNG---TSPSPSPKDLSLRCSTRWRTWP 8
S++ P P S+ + G TS+ S+G TS SPSP S S++ T P
Sbjct: 1090 SSTSPNPSQSTSPSTSGATSSPGSSGTTLTSISPSPSQSSTIGSSQGSTSP 1140
>AF043704-3|AAK21473.2| 823|Caenorhabditis elegans Sulfate permease
family protein 6 protein.
Length = 823
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 283 PEVGIEELSADIYYKNLEPFVRGIHPAAPLKHLEVQ 390
P + I + IY+ N E FVR IH A L L V+
Sbjct: 560 PGIKIFRFDSPIYFGNSEMFVRKIHQACGLNPLIVR 595
>U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like
protein protein 18 protein.
Length = 932
Score = 27.9 bits (59), Expect = 6.1
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +1
Query: 136 QEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSAD 315
+ +R++ +KEK+ + L L IDA RK + E SK EEL
Sbjct: 575 ESLRKSEAVAEGYKEKVTANNLTLDKLLLHIDAS-RKRIAELELSSKESENRSSEELEEQ 633
Query: 316 -IYYKNL 333
+YY ++
Sbjct: 634 RLYYVSM 640
>AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like
protein-18 protein.
Length = 932
Score = 27.9 bits (59), Expect = 6.1
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +1
Query: 136 QEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSAD 315
+ +R++ +KEK+ + L L IDA RK + E SK EEL
Sbjct: 575 ESLRKSEAVAEGYKEKVTANNLTLDKLLLHIDAS-RKRIAELELSSKESENRSSEELEEQ 633
Query: 316 -IYYKNL 333
+YY ++
Sbjct: 634 RLYYVSM 640
>AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like
protein KLP-18 protein.
Length = 930
Score = 27.9 bits (59), Expect = 6.1
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +1
Query: 136 QEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSAD 315
+ +R++ +KEK+ + L L IDA RK + E SK EEL
Sbjct: 573 ESLRKSEAVAEGYKEKVTANNLTLDKLLLHIDAS-RKRIAELELSSKESENRSSEELEEQ 631
Query: 316 -IYYKNL 333
+YY ++
Sbjct: 632 RLYYVSM 638
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 27.5 bits (58), Expect = 8.1
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +1
Query: 175 KEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSADIYYKNLEP 339
KE+ E+ ++ + D + +KE ++ ++ K E EV EE S + K LEP
Sbjct: 323 KEEEQKEEVEKKEEEEKKDEEPKKEEEKKEEEEKKEDEV--EEKSEKVEEKELEP 375
>Z80215-6|CAD56562.2| 1052|Caenorhabditis elegans Hypothetical
protein C36B1.8b protein.
Length = 1052
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = -1
Query: 124 SSDTTCRGPTSN-DQSNGTSPSPSP 53
S T RG + N +QSN TSP P P
Sbjct: 494 SKPNTARGSSGNINQSNTTSPEPEP 518
>Z80215-5|CAB02273.3| 1049|Caenorhabditis elegans Hypothetical
protein C36B1.8a protein.
Length = 1049
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = -1
Query: 124 SSDTTCRGPTSN-DQSNGTSPSPSP 53
S T RG + N +QSN TSP P P
Sbjct: 494 SKPNTARGSSGNINQSNTTSPEPEP 518
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,458,817
Number of Sequences: 27780
Number of extensions: 316109
Number of successful extensions: 1501
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1501
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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