Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV1d02f
(616 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 24 1.0
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 23 3.1
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 22 4.1
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 22 4.1
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 22 4.1
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 4.1
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 22 4.1
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 4.1
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 22 5.5
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 21 9.6
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 9.6
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 9.6
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 24.2 bits (50), Expect = 1.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 308 DNSSIPTSGSVFDCLVASSTSLRTL 234
DN P G+VF L++ T LRTL
Sbjct: 513 DNRRRPNPGTVFARLLSVLTELRTL 537
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 22.6 bits (46), Expect = 3.1
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = +1
Query: 307 SADIYYKNLEPFVRGIHPAAPLKHLEVQ 390
S +YY N+EPF++ + +++ +Q
Sbjct: 273 SHSLYYVNMEPFMKSQYEENNIEYEGIQ 300
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 22.2 bits (45), Expect = 4.1
Identities = 8/27 (29%), Positives = 18/27 (66%)
Frame = -2
Query: 429 VNIIYIEVLVVARLDLKVFERGSRVDA 349
++++Y+E+ + R L+ R SR++A
Sbjct: 212 MSLVYLEIYLATRRRLRERARQSRINA 238
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 22.2 bits (45), Expect = 4.1
Identities = 8/27 (29%), Positives = 18/27 (66%)
Frame = -2
Query: 429 VNIIYIEVLVVARLDLKVFERGSRVDA 349
++++Y+E+ + R L+ R SR++A
Sbjct: 212 MSLVYLEIYLATRRRLRERARQSRINA 238
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 22.2 bits (45), Expect = 4.1
Identities = 8/27 (29%), Positives = 18/27 (66%)
Frame = -2
Query: 429 VNIIYIEVLVVARLDLKVFERGSRVDA 349
++++Y+E+ + R L+ R SR++A
Sbjct: 212 MSLVYLEIYLATRRRLRERARQSRINA 238
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 22.2 bits (45), Expect = 4.1
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -1
Query: 142 PPAPRLSSDTTCRGPTSNDQSNGTS 68
PPAPRL++ + + + N + T+
Sbjct: 213 PPAPRLTNSNSIKHESDNSDYSHTT 237
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 22.2 bits (45), Expect = 4.1
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +1
Query: 307 SADIYYKNLEPFVRGIHPAAPLKHLEVQ 390
S +YY N +PF++ + A +++ VQ
Sbjct: 273 SRSLYYVNTKPFMKSEYGANNVQYQGVQ 300
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.2 bits (45), Expect = 4.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 76 GTSPSPSPKDLSLRCSTRWRTWPPP 2
G SP+ SP+ LS ++ T P P
Sbjct: 820 GNSPASSPRYLSAAATSSTSTSPRP 844
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 21.8 bits (44), Expect = 5.5
Identities = 10/45 (22%), Positives = 20/45 (44%)
Frame = -1
Query: 139 PAPRLSSDTTCRGPTSNDQSNGTSPSPSPKDLSLRCSTRWRTWPP 5
P+ ++ D C + ++ +SP P P+ +L + T P
Sbjct: 393 PSVKIDEDQKCSIESITSVNSTSSPKPFPRRATLAQLHNFTTMTP 437
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 21.0 bits (42), Expect = 9.6
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -2
Query: 279 RLRLFSGLVYFFTYLGVDILELIWRDE 199
RLRL + + L VD L IWR +
Sbjct: 65 RLRLPENMSEDYRILDVDWLHNIWRPD 91
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3
Query: 207 ARSAQGYRRQGT 242
AR+AQGY +GT
Sbjct: 563 ARNAQGYSARGT 574
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +1
Query: 157 DPITSFKEKILNHELVTPD 213
D + ++K KIL ++PD
Sbjct: 733 DTVLAYKPKILGKPTISPD 751
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,173
Number of Sequences: 438
Number of extensions: 4572
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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