Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV1c20r
         (861 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089283-1|AAL90021.1|  338|Drosophila melanogaster AT07973p pro...   239   3e-63
AE013599-3862|AAF47199.1|  338|Drosophila melanogaster CG3416-PA...   239   3e-63
M64643-1|AAA28695.1|  338|Drosophila melanogaster Mov34 protein.      216   4e-56

>AY089283-1|AAL90021.1|  338|Drosophila melanogaster AT07973p
           protein.
          Length = 338

 Score =  239 bits (586), Expect = 3e-63
 Identities = 113/154 (73%), Positives = 130/154 (84%)
 Frame = -2

Query: 860 DLGLPTEAYQAVEEVHDDGTPTSRTFEHVPSEIXXXXXXXXXXEHLLRDIKDTTVGSLSQ 681
           DLGLPTEAY +VEEVHDDG+PTS+TFEHVPSEI          EHLLRDIKDTTVGSLSQ
Sbjct: 133 DLGLPTEAYISVEEVHDDGSPTSKTFEHVPSEIGAEEAEEVGVEHLLRDIKDTTVGSLSQ 192

Query: 680 RITNQLLGLKGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQLQDIFNLLPDIANDNFIDNL 501
           +ITNQL+GLKGL++QL +I+ YL +VG   +P+NHQI+YQLQDIFNLLPDI ND F   +
Sbjct: 193 KITNQLMGLKGLNAQLRDIKQYLQRVGDSKMPINHQIVYQLQDIFNLLPDITNDQFTGTM 252

Query: 500 YVKTNDQSLVVYLAALVRSIIALHNLINNKITNR 399
           YVKTNDQ LVVYLA++VRSIIALHNLINNK+ NR
Sbjct: 253 YVKTNDQMLVVYLASMVRSIIALHNLINNKLANR 286


>AE013599-3862|AAF47199.1|  338|Drosophila melanogaster CG3416-PA
           protein.
          Length = 338

 Score =  239 bits (586), Expect = 3e-63
 Identities = 113/154 (73%), Positives = 130/154 (84%)
 Frame = -2

Query: 860 DLGLPTEAYQAVEEVHDDGTPTSRTFEHVPSEIXXXXXXXXXXEHLLRDIKDTTVGSLSQ 681
           DLGLPTEAY +VEEVHDDG+PTS+TFEHVPSEI          EHLLRDIKDTTVGSLSQ
Sbjct: 133 DLGLPTEAYISVEEVHDDGSPTSKTFEHVPSEIGAEEAEEVGVEHLLRDIKDTTVGSLSQ 192

Query: 680 RITNQLLGLKGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQLQDIFNLLPDIANDNFIDNL 501
           +ITNQL+GLKGL++QL +I+ YL +VG   +P+NHQI+YQLQDIFNLLPDI ND F   +
Sbjct: 193 KITNQLMGLKGLNAQLRDIKQYLQRVGDSKMPINHQIVYQLQDIFNLLPDITNDQFTGTM 252

Query: 500 YVKTNDQSLVVYLAALVRSIIALHNLINNKITNR 399
           YVKTNDQ LVVYLA++VRSIIALHNLINNK+ NR
Sbjct: 253 YVKTNDQMLVVYLASMVRSIIALHNLINNKLANR 286


>M64643-1|AAA28695.1|  338|Drosophila melanogaster Mov34 protein.
          Length = 338

 Score =  216 bits (527), Expect = 4e-56
 Identities = 101/141 (71%), Positives = 118/141 (83%)
 Frame = -2

Query: 821 EVHDDGTPTSRTFEHVPSEIXXXXXXXXXXEHLLRDIKDTTVGSLSQRITNQLLGLKGLH 642
           +VHDDG+PTS+TFEHVPSEI          EHLLRDIKDTTVGSLSQ+ITNQL+GLKGL+
Sbjct: 146 KVHDDGSPTSKTFEHVPSEIGPEEAEEVGVEHLLRDIKDTTVGSLSQKITNQLMGLKGLN 205

Query: 641 SQLTEIRDYLVQVGQGSLPMNHQIIYQLQDIFNLLPDIANDNFIDNLYVKTNDQSLVVYL 462
           +QL +I+ YL +VG   +P+NHQI+YQLQDIFNLLPDI ND F   +YVKTNDQ LVVYL
Sbjct: 206 AQLRDIKQYLQRVGDSKMPINHQIVYQLQDIFNLLPDITNDQFTGTMYVKTNDQMLVVYL 265

Query: 461 AALVRSIIALHNLINNKITNR 399
           A++VRSIIALHNLINNK+ NR
Sbjct: 266 ASMVRSIIALHNLINNKLANR 286


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,197,215
Number of Sequences: 53049
Number of extensions: 475393
Number of successful extensions: 956
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4147514904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)