Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV1c20f
         (687 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070234-1|AAL58538.1|  223|Anopheles gambiae glutathione S-tran...    26   1.3  
AF515521-1|AAM61888.1|  233|Anopheles gambiae glutathione S-tran...    25   2.2  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    24   3.9  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   5.2  
AY330178-1|AAQ16284.1|  176|Anopheles gambiae odorant-binding pr...    23   9.0  
AJ618921-1|CAF02000.1|  172|Anopheles gambiae putative odorant-b...    23   9.0  

>AY070234-1|AAL58538.1|  223|Anopheles gambiae glutathione
           S-transferase E3 protein.
          Length = 223

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 15/55 (27%), Positives = 25/55 (45%)
 Frame = +1

Query: 382 VWFLDHDYLENMYGMFKKVNAREKVVGWYHTGPKLHQNDIAINELIRRYCPNSVL 546
           V ++D    ENM   + K+N    V      G  L+ +   IN L+++Y  +  L
Sbjct: 31  VQYIDLAKKENMTEEYLKMNPMHTVPTVNDNGVPLYDSHAIINYLVQKYAKDDTL 85


>AF515521-1|AAM61888.1|  233|Anopheles gambiae glutathione
           S-transferase u1 protein.
          Length = 233

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 14/62 (22%), Positives = 31/62 (50%)
 Frame = +1

Query: 391 LDHDYLENMYGMFKKVNAREKVVGWYHTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPK 570
           +D+   E++   ++K+N ++++      G  L +++  +  L  +Y P S L   D K +
Sbjct: 31  VDYGKAEHLTAEYEKMNPQKEIPVLDDDGFFLSESNAILQYLCEKYAPTSDLYPNDPKDR 90

Query: 571 DL 576
            L
Sbjct: 91  AL 92


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = +1

Query: 454 VVGWYHTGPKLHQNDIAINELIRRYCPNSVLV 549
           ++ W   GP+ H+  + I  +   Y P  +L+
Sbjct: 316 IINWNFRGPRTHRMPMWIRSVFLHYLPAMLLM 347


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 578  VYRLKLTKQ*RKYTMMVHQLRGPLN 652
            V++L    Q  KY + +  ++GPLN
Sbjct: 970  VFKLHYKVQNNKYVLKLKSMKGPLN 994


>AY330178-1|AAQ16284.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP51 protein.
          Length = 176

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 267 RESETSSRCSIGLLESQGCLRRIEQLRS 350
           +E  T S C +  L+ QGC+  +E +R+
Sbjct: 126 QEKFTKSECGMFALKFQGCI-MVESMRN 152


>AJ618921-1|CAF02000.1|  172|Anopheles gambiae putative
           odorant-binding protein OBP5479 protein.
          Length = 172

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 267 RESETSSRCSIGLLESQGCLRRIEQLRS 350
           +E  T S C +  L+ QGC+  +E +R+
Sbjct: 128 QEKFTKSECGMFALKFQGCI-MVESMRN 154


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 684,477
Number of Sequences: 2352
Number of extensions: 13347
Number of successful extensions: 28
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)