BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV1c12f
(618 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 25 1.5
AY390608-1|AAR27305.1| 242|Anopheles gambiae SP22D protein. 23 6.0
AY390607-1|AAR27304.1| 242|Anopheles gambiae SP22D protein. 23 6.0
AY390606-1|AAR27303.1| 241|Anopheles gambiae SP22D protein. 23 6.0
AY390605-1|AAR27302.1| 241|Anopheles gambiae SP22D protein. 23 6.0
AY390604-1|AAR27301.1| 241|Anopheles gambiae SP22D protein. 23 6.0
AY390603-1|AAR27300.1| 241|Anopheles gambiae SP22D protein. 23 6.0
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 23 6.0
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 23 6.0
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 25.4 bits (53), Expect = 1.5
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = -2
Query: 314 YFIPLFQYLFKQSSGPKNILPFVILYFWGFFLL 216
Y+ L+Q + + S+GP ++L F+++ F G F L
Sbjct: 387 YWENLYQLVLR-SAGPWHMLFFIVIIFLGSFYL 418
>AY390608-1|AAR27305.1| 242|Anopheles gambiae SP22D protein.
Length = 242
Score = 23.4 bits (48), Expect = 6.0
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 471 YRGEECILQLAPRFAYGEMGLKPGES 548
Y + + LAPRF YGE GE+
Sbjct: 64 YTQQPAPVPLAPRFGYGEEDRLIGET 89
>AY390607-1|AAR27304.1| 242|Anopheles gambiae SP22D protein.
Length = 242
Score = 23.4 bits (48), Expect = 6.0
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 471 YRGEECILQLAPRFAYGEMGLKPGES 548
Y + + LAPRF YGE GE+
Sbjct: 64 YTQQPAPVPLAPRFGYGEEDRLIGET 89
>AY390606-1|AAR27303.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 23.4 bits (48), Expect = 6.0
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 471 YRGEECILQLAPRFAYGEMGLKPGES 548
Y + + LAPRF YGE GE+
Sbjct: 63 YTQQPAPVPLAPRFGYGEEDRLIGET 88
>AY390605-1|AAR27302.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 23.4 bits (48), Expect = 6.0
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 471 YRGEECILQLAPRFAYGEMGLKPGES 548
Y + + LAPRF YGE GE+
Sbjct: 63 YTQQPAPVPLAPRFGYGEEDRLIGET 88
>AY390604-1|AAR27301.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 23.4 bits (48), Expect = 6.0
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 471 YRGEECILQLAPRFAYGEMGLKPGES 548
Y + + LAPRF YGE GE+
Sbjct: 63 YTQQPAPVPLAPRFGYGEEDRLIGET 88
>AY390603-1|AAR27300.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 23.4 bits (48), Expect = 6.0
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 471 YRGEECILQLAPRFAYGEMGLKPGES 548
Y + + LAPRF YGE GE+
Sbjct: 63 YTQQPAPVPLAPRFGYGEEDRLIGET 88
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 23.4 bits (48), Expect = 6.0
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 471 YRGEECILQLAPRFAYGEMGLKPGES 548
Y + + LAPRF YGE GE+
Sbjct: 135 YTQQPAPVPLAPRFGYGEEDRLIGET 160
>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
protein.
Length = 1322
Score = 23.4 bits (48), Expect = 6.0
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 471 YRGEECILQLAPRFAYGEMGLKPGES 548
Y + + LAPRF YGE GE+
Sbjct: 134 YTQQPAPVPLAPRFGYGEEDRLIGET 159
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,203
Number of Sequences: 2352
Number of extensions: 12112
Number of successful extensions: 22
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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