BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV1c12f
(618 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058659-1|AAL13888.1| 397|Drosophila melanogaster LD36412p pro... 73 2e-13
AE013599-2733|AAF57662.1| 397|Drosophila melanogaster CG5482-PA... 73 2e-13
AF163664-1|AAF18387.1| 439|Drosophila melanogaster FK506-bindin... 56 3e-08
AY058729-1|AAL13958.1| 439|Drosophila melanogaster LD47530p pro... 54 1e-07
AE014134-1709|AAF52818.1| 439|Drosophila melanogaster CG4535-PA... 54 1e-07
AY095183-1|AAM12276.1| 138|Drosophila melanogaster GM09283p pro... 32 0.71
AY075550-1|AAL68357.1| 138|Drosophila melanogaster RH50927p pro... 32 0.71
AE014297-1351|AAF54674.1| 138|Drosophila melanogaster CG14715-P... 32 0.71
BT012468-1|AAS93739.1| 231|Drosophila melanogaster RE40519p pro... 31 1.2
AF132555-1|AAD27854.2| 256|Drosophila melanogaster GM07659p pro... 31 1.2
AF132154-1|AAD34742.1| 216|Drosophila melanogaster unknown prot... 31 1.2
AE013599-3205|AAF46726.1| 216|Drosophila melanogaster CG9847-PA... 31 1.2
AE013599-3204|AAM70900.1| 231|Drosophila melanogaster CG9847-PB... 31 1.2
U34773-1|AAC47309.1| 725|Drosophila melanogaster DEAD-box prote... 29 6.6
AY119029-1|AAM50889.1| 507|Drosophila melanogaster LP05465p pro... 28 8.8
AE014134-2443|AAF53364.2| 620|Drosophila melanogaster CG8942-PA... 28 8.8
>AY058659-1|AAL13888.1| 397|Drosophila melanogaster LD36412p
protein.
Length = 397
Score = 73.3 bits (172), Expect = 2e-13
Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Frame = +3
Query: 123 TDKSESSSFEDLXXXXXXXXXXXXXXXXXXXXXXXSP-----------EVKNDEWQDVLG 269
T+KS SSSFEDL P E +E D+LG
Sbjct: 3 TEKSSSSSFEDLTNAEDTKDIRKVAAEEAASGDGAPPASVSGDGQKAEEEDAEEECDILG 62
Query: 270 SGALLKKILKQGDEISGSRPQRGDICRISYELKIKDSNNIVEKRDQIKIYLGDNEVLQGL 449
+ L+K+ +K+ + S RP RG++ +++ K+ D+ +VE + ++GD EV+QGL
Sbjct: 63 NKQLIKRTIKKAPQDSFRRPIRGELVTVNFTGKL-DNGTVVENELNFQCHVGDYEVIQGL 121
Query: 450 DLALTLMYRGEECILQLAPRFAYGEMGL-KPGESLGLV 560
D+ L ++ GE + + RF YG +GL K GES LV
Sbjct: 122 DMVLPMLQVGEVSQVSVDSRFGYGSLGLKKEGESEYLV 159
>AE013599-2733|AAF57662.1| 397|Drosophila melanogaster CG5482-PA
protein.
Length = 397
Score = 73.3 bits (172), Expect = 2e-13
Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Frame = +3
Query: 123 TDKSESSSFEDLXXXXXXXXXXXXXXXXXXXXXXXSP-----------EVKNDEWQDVLG 269
T+KS SSSFEDL P E +E D+LG
Sbjct: 3 TEKSSSSSFEDLTNAEDTKDIRKVAAEEAASGDGAPPASVSGDGQKAEEEDAEEECDILG 62
Query: 270 SGALLKKILKQGDEISGSRPQRGDICRISYELKIKDSNNIVEKRDQIKIYLGDNEVLQGL 449
+ L+K+ +K+ + S RP RG++ +++ K+ D+ +VE + ++GD EV+QGL
Sbjct: 63 NKQLIKRTIKKAPQDSFRRPIRGELVTVNFTGKL-DNGTVVENELNFQCHVGDYEVIQGL 121
Query: 450 DLALTLMYRGEECILQLAPRFAYGEMGL-KPGESLGLV 560
D+ L ++ GE + + RF YG +GL K GES LV
Sbjct: 122 DMVLPMLQVGEVSQVSVDSRFGYGSLGLKKEGESEYLV 159
>AF163664-1|AAF18387.1| 439|Drosophila melanogaster FK506-binding
protein FKBP59 protein.
Length = 439
Score = 56.4 bits (130), Expect = 3e-08
Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Frame = +3
Query: 258 DVLGSGALLKKILKQGDEISGSRPQRGDICRISYELKIKDSNNI---VEKRDQIKIYLGD 428
D+ G G +LK+ILK+G P G + Y ++ D + + + + LG
Sbjct: 8 DLSGDGGVLKEILKEGT--GTETPHSGCTVSLHYTGRLVDGTEFDSSLSRNEPFEFSLGK 65
Query: 429 NEVLQGLDLALTLMYRGEECILQLAPRFAYGEMGLKPG--ESLGLVGQCDEPKYKGPIIG 602
EV++ D+ + M GE C L AP +AYG G P L+ + + +KG +
Sbjct: 66 GEVIKAFDMGVATMKLGERCFLTCAPNYAYGAAGSPPAIPPDATLIFELEMLGWKGEDLS 125
Query: 603 PD 608
P+
Sbjct: 126 PN 127
>AY058729-1|AAL13958.1| 439|Drosophila melanogaster LD47530p
protein.
Length = 439
Score = 54.4 bits (125), Expect = 1e-07
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 5/122 (4%)
Frame = +3
Query: 258 DVLGSGALLKKILKQGDEISGSRPQRGDICRISYELKIKDSNNI---VEKRDQIKIYLGD 428
D+ G G +LK+ILK+G P G + Y ++ D + + + + LG
Sbjct: 8 DLSGDGGVLKEILKEGT--GTETPHSGCTVSLHYTGRLVDGTEFDSSLSRNEPFEFSLGK 65
Query: 429 NEVLQGLDLALTLMYRGEECILQLAPRFAYGEMGLKPG--ESLGLVGQCDEPKYKGPIIG 602
V++ D+ + M GE C L AP +AYG G P L+ + + +KG +
Sbjct: 66 GNVIKAFDMGVATMKLGERCFLTCAPNYAYGAAGSPPAIPPDATLIFELEMLGWKGEDLS 125
Query: 603 PD 608
P+
Sbjct: 126 PN 127
>AE014134-1709|AAF52818.1| 439|Drosophila melanogaster CG4535-PA
protein.
Length = 439
Score = 54.4 bits (125), Expect = 1e-07
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 5/122 (4%)
Frame = +3
Query: 258 DVLGSGALLKKILKQGDEISGSRPQRGDICRISYELKIKDSNNI---VEKRDQIKIYLGD 428
D+ G G +LK+ILK+G P G + Y ++ D + + + + LG
Sbjct: 8 DLSGDGGVLKEILKEGT--GTETPHSGCTVSLHYTGRLVDGTEFDSSLSRNEPFEFSLGK 65
Query: 429 NEVLQGLDLALTLMYRGEECILQLAPRFAYGEMGLKPG--ESLGLVGQCDEPKYKGPIIG 602
V++ D+ + M GE C L AP +AYG G P L+ + + +KG +
Sbjct: 66 GNVIKAFDMGVATMKLGERCFLTCAPNYAYGAAGSPPAIPPDATLIFELEMLGWKGEDLS 125
Query: 603 PD 608
P+
Sbjct: 126 PN 127
>AY095183-1|AAM12276.1| 138|Drosophila melanogaster GM09283p
protein.
Length = 138
Score = 31.9 bits (69), Expect = 0.71
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 3/87 (3%)
Frame = +3
Query: 294 LKQGDEISGSRPQRGDICRISYELKIKDSNNI---VEKRDQIKIYLGDNEVLQGLDLALT 464
+K+ E + + GD+ + Y ++D + LG +V++G D +
Sbjct: 27 IKKRVENCTRKAKGGDLVHVHYRGALQDGTEFDSSYSRGTPFSFTLGARQVIKGWDQGIL 86
Query: 465 LMYRGEECILQLAPRFAYGEMGLKPGE 545
M GE+ L + P YG G G+
Sbjct: 87 GMCEGEQRKLTIPPELGYGASGAGGGK 113
>AY075550-1|AAL68357.1| 138|Drosophila melanogaster RH50927p
protein.
Length = 138
Score = 31.9 bits (69), Expect = 0.71
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 3/87 (3%)
Frame = +3
Query: 294 LKQGDEISGSRPQRGDICRISYELKIKDSNNI---VEKRDQIKIYLGDNEVLQGLDLALT 464
+K+ E + + GD+ + Y ++D + LG +V++G D +
Sbjct: 27 IKKRVENCTRKAKGGDLVHVHYRGALQDGTEFDSSYSRGTPFSFTLGARQVIKGWDQGIL 86
Query: 465 LMYRGEECILQLAPRFAYGEMGLKPGE 545
M GE+ L + P YG G G+
Sbjct: 87 GMCEGEQRKLTIPPELGYGASGAGGGK 113
>AE014297-1351|AAF54674.1| 138|Drosophila melanogaster CG14715-PA
protein.
Length = 138
Score = 31.9 bits (69), Expect = 0.71
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 3/87 (3%)
Frame = +3
Query: 294 LKQGDEISGSRPQRGDICRISYELKIKDSNNI---VEKRDQIKIYLGDNEVLQGLDLALT 464
+K+ E + + GD+ + Y ++D + LG +V++G D +
Sbjct: 27 IKKRVENCTRKAKGGDLVHVHYRGALQDGTEFDSSYSRGTPFSFTLGARQVIKGWDQGIL 86
Query: 465 LMYRGEECILQLAPRFAYGEMGLKPGE 545
M GE+ L + P YG G G+
Sbjct: 87 GMCEGEQRKLTIPPELGYGASGAGGGK 113
>BT012468-1|AAS93739.1| 231|Drosophila melanogaster RE40519p
protein.
Length = 231
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 399 RDQ-IKIYLGDNEVLQGLDLALTLMYRGEECILQLAPRFAYGEMG 530
RDQ LG +V++G D L M GE+ L + P+ YG+ G
Sbjct: 83 RDQPFTFQLGAGQVIKGWDQGLLNMCVGEKRKLTIPPQLGYGDQG 127
>AF132555-1|AAD27854.2| 256|Drosophila melanogaster GM07659p
protein.
Length = 256
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 399 RDQ-IKIYLGDNEVLQGLDLALTLMYRGEECILQLAPRFAYGEMG 530
RDQ LG +V++G D L M GE+ L + P+ YG+ G
Sbjct: 108 RDQPFTFQLGAGQVIKGWDQGLLNMCVGEKRKLTIPPQLGYGDQG 152
>AF132154-1|AAD34742.1| 216|Drosophila melanogaster unknown
protein.
Length = 216
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 399 RDQ-IKIYLGDNEVLQGLDLALTLMYRGEECILQLAPRFAYGEMG 530
RDQ LG +V++G D L M GE+ L + P+ YG+ G
Sbjct: 68 RDQPFTFQLGAGQVIKGWDQGLLNMCVGEKRKLTIPPQLGYGDQG 112
>AE013599-3205|AAF46726.1| 216|Drosophila melanogaster CG9847-PA,
isoform A protein.
Length = 216
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 399 RDQ-IKIYLGDNEVLQGLDLALTLMYRGEECILQLAPRFAYGEMG 530
RDQ LG +V++G D L M GE+ L + P+ YG+ G
Sbjct: 68 RDQPFTFQLGAGQVIKGWDQGLLNMCVGEKRKLTIPPQLGYGDQG 112
>AE013599-3204|AAM70900.1| 231|Drosophila melanogaster CG9847-PB,
isoform B protein.
Length = 231
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 399 RDQ-IKIYLGDNEVLQGLDLALTLMYRGEECILQLAPRFAYGEMG 530
RDQ LG +V++G D L M GE+ L + P+ YG+ G
Sbjct: 83 RDQPFTFQLGAGQVIKGWDQGLLNMCVGEKRKLTIPPQLGYGDQG 127
>U34773-1|AAC47309.1| 725|Drosophila melanogaster DEAD-box protein
protein.
Length = 725
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +3
Query: 507 RFAYGEMGLKPGESLGLVGQCDE-PKYK--GPIIGPDTW 614
+F +G+ K G VG C P++ PI GPD+W
Sbjct: 238 QFNFGKTDFKYAPGNGFVGACQAGPEHSKANPITGPDSW 276
>AY119029-1|AAM50889.1| 507|Drosophila melanogaster LP05465p
protein.
Length = 507
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -1
Query: 477 LCTLKLMLGPN-LAIPHCLLNIFLSDLFSPQCCYC 376
+C++ +GPN + P C LN SP+ C C
Sbjct: 327 VCSIGYQMGPNQVCEPKCSLNCVHGKCTSPETCTC 361
>AE014134-2443|AAF53364.2| 620|Drosophila melanogaster CG8942-PA
protein.
Length = 620
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -1
Query: 477 LCTLKLMLGPN-LAIPHCLLNIFLSDLFSPQCCYC 376
+C++ +GPN + P C LN SP+ C C
Sbjct: 327 VCSIGYQMGPNQVCEPKCSLNCVHGKCTSPETCTC 361
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,655,811
Number of Sequences: 53049
Number of extensions: 500432
Number of successful extensions: 1270
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1265
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -