Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV1c12f
(618 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein. 44 9e-05
AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical... 44 9e-05
AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding... 43 2e-04
Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding p... 40 0.002
U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding p... 40 0.002
AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical... 39 0.002
Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z49126-5|CAA88940.3| 1270|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z54342-17|CAA91155.2| 365|Caenorhabditis elegans Hypothetical p... 29 3.5
Z49913-8|CAA90148.2| 365|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z78419-5|CAB01703.1| 313|Caenorhabditis elegans Hypothetical pr... 27 8.1
DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-t... 27 8.1
AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-t... 27 8.1
AF045640-7|AAU05589.1| 978|Caenorhabditis elegans Novel channel... 27 8.1
AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel... 27 8.1
AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel... 27 8.1
AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel... 27 8.1
>U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein.
Length = 108
Score = 44.0 bits (99), Expect = 9e-05
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +3
Query: 285 KKILKQGDEISGSRPQRGDICRISYELKIKDSNNIVEKRDQ---IKIYLGDNEVLQGLDL 455
++IL +GD ++ +P+ G Y L +++ I RD+ K +G EV++G D
Sbjct: 5 RQILVEGDNVT--KPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGKGEVIKGWDQ 62
Query: 456 ALTLMYRGEECILQLAPRFAYGEMGLKP 539
+ M GE+ L ++ YG G+ P
Sbjct: 63 GVAQMSVGEKSKLTISADLGYGPRGVPP 90
>AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical
protein Y18D10A.19 protein.
Length = 108
Score = 44.0 bits (99), Expect = 9e-05
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +3
Query: 285 KKILKQGDEISGSRPQRGDICRISYELKIKDSNNIVEKRDQ---IKIYLGDNEVLQGLDL 455
++IL +GD ++ +P+ G Y L +++ I RD+ K +G EV++G D
Sbjct: 5 RQILVEGDNVT--KPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGKGEVIKGWDQ 62
Query: 456 ALTLMYRGEECILQLAPRFAYGEMGLKP 539
+ M GE+ L ++ YG G+ P
Sbjct: 63 GVAQMSVGEKSKLTISADLGYGPRGVPP 90
>AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding
protein family protein3 protein.
Length = 261
Score = 42.7 bits (96), Expect = 2e-04
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Frame = +3
Query: 309 EISG--SRPQRGDICRISYELKIKDSNNIVEK--RDQIKIY-LGDNEVLQGLDLALTLMY 473
E+ G + Q GD Y L ++D + I R++ I+ +G +V++G+D+A+ M
Sbjct: 155 EVEGCTEKAQAGDTLHQQYTLNLEDGSFIDSSWSRNRPFIFKMGSGQVIKGMDIAMEGMC 214
Query: 474 RGEECILQLAPRFAYGEMGLKP 539
+GE+ + + P AYGE G P
Sbjct: 215 QGEKRKVVIPPELAYGENGRPP 236
>Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical
protein F31D4.3 protein.
Length = 431
Score = 41.5 bits (93), Expect = 5e-04
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Frame = +3
Query: 273 GALLKKILKQGDEISGSRPQRGDICRISYELKIKDSNNIVEKRD---QIKIYLGDNEVLQ 443
G +LK I K+G + +P G ++ Y +++ RD Q LG V++
Sbjct: 14 GGVLKLIKKEGQGVV--KPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNVIK 71
Query: 444 GLDLALTLMYRGEECILQLAPRFAYGEMGLKP 539
G DL + M +GE + + YG+ G P
Sbjct: 72 GWDLGVATMTKGEVAEFTIRSDYGYGDAGSPP 103
>U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding
protein family protein5, isoform a protein.
Length = 264
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = +3
Query: 306 DEISGSRPQRGDICRISYELKIKDSNNIVEK--RDQIKIY-LGDNEVLQGLDLALTLMYR 476
DE + + GD Y L ++D + R+ I+ L +NEV++G+D+A+T M
Sbjct: 161 DEDKCKKSKSGDTIHQQYVLHLEDGTFVDSSFSRNAPFIFKLNNNEVIKGMDIAMTGMCE 220
Query: 477 GEECILQLAPRFAYGEMGLKP 539
GE + + F YG+ G P
Sbjct: 221 GERRQVVIPSDFGYGDDGRAP 241
>U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding
protein family protein5, isoform b protein.
Length = 300
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = +3
Query: 306 DEISGSRPQRGDICRISYELKIKDSNNIVEK--RDQIKIY-LGDNEVLQGLDLALTLMYR 476
DE + + GD Y L ++D + R+ I+ L +NEV++G+D+A+T M
Sbjct: 197 DEDKCKKSKSGDTIHQQYVLHLEDGTFVDSSFSRNAPFIFKLNNNEVIKGMDIAMTGMCE 256
Query: 477 GEECILQLAPRFAYGEMGLKP 539
GE + + F YG+ G P
Sbjct: 257 GERRQVVIPSDFGYGDDGRAP 277
>AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical
protein Y18D10A.25 protein.
Length = 290
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +3
Query: 315 SGSRPQRGDICRISYELKIKD---SNNIVEKRDQIKIYLGDNEVLQGLDLALTLMYRGEE 485
+G P+ G + + E+K+ D S + E ++ I +G EV+ GLD+ + M GE
Sbjct: 95 NGVMPENGQLVQCYIEIKLADCYTSWSNYESQNPIIFKIGFGEVIPGLDIGIPKMKVGEI 154
Query: 486 CILQLAPRFAYGEMGLK 536
++ ++ YG G +
Sbjct: 155 ATFHVSGKYGYGRAGFR 171
>Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical
protein ZC455.10 protein.
Length = 259
Score = 32.7 bits (71), Expect = 0.22
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Frame = +3
Query: 324 RPQRGDICRISYELKIKDSNNIVEK---RDQIKIY-LGDNEVLQGLDLALTLMYRGEECI 491
+ + GD Y L+++D N +V+ R+ ++ L + EV+ G+D+A+ M GE
Sbjct: 162 KAEAGDKIYQQYVLRLED-NTLVDSSYSRNAPFVFRLRNREVIDGMDIAMDGMCEGERRR 220
Query: 492 LQLAPRFAYGEMGLKP 539
+ + + YG G P
Sbjct: 221 VVIPSEYGYGSQGSPP 236
>Z49126-5|CAA88940.3| 1270|Caenorhabditis elegans Hypothetical
protein DH11.3 protein.
Length = 1270
Score = 31.5 bits (68), Expect = 0.50
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 360 ELKIKDSNNIVEKRD-QIKIYLGDNEVLQGLDL 455
E+KI + +E RD + K + DNEVLQGL L
Sbjct: 390 EIKISSTRGNIEFRDVRFKYFTRDNEVLQGLSL 422
>Z54342-17|CAA91155.2| 365|Caenorhabditis elegans Hypothetical
protein C08H9.8 protein.
Length = 365
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 384 NIVEKRDQIKIYLGDNEVLQGLDLALTLMYRGEEC 488
NI+ KR++I I + D EVL G D+ L + EC
Sbjct: 225 NILVKRNKI-IRISDFEVLSGYDVPLPFFWLAPEC 258
>Z49913-8|CAA90148.2| 365|Caenorhabditis elegans Hypothetical
protein C08H9.8 protein.
Length = 365
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 384 NIVEKRDQIKIYLGDNEVLQGLDLALTLMYRGEEC 488
NI+ KR++I I + D EVL G D+ L + EC
Sbjct: 225 NILVKRNKI-IRISDFEVLSGYDVPLPFFWLAPEC 258
>Z78419-5|CAB01703.1| 313|Caenorhabditis elegans Hypothetical
protein F26A3.5 protein.
Length = 313
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +3
Query: 228 SPEVKN-DEWQDVLGSGALLKKILKQGD 308
S E N D+W+D+L + A++KK ++ D
Sbjct: 262 SDEANNIDDWKDLLRNNAIIKKAVEHSD 289
>DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1797
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -2
Query: 449 QTLQYLIVS*IYFYLISFLHNVVTVFYFE--FIADSAYVPSLWSGSRYFIPLFQYL 288
Q L Y+I++ + + F+ + V ++E F DS+Y+ + WS FI + L
Sbjct: 77 QPLNYIILAADFISVSIFMLDSVLRIHYEGIFRCDSSYLSNRWSQFSVFISIIHLL 132
>AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1831
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -2
Query: 449 QTLQYLIVS*IYFYLISFLHNVVTVFYFE--FIADSAYVPSLWSGSRYFIPLFQYL 288
Q L Y+I++ + + F+ + V ++E F DS+Y+ + WS FI + L
Sbjct: 77 QPLNYIILAADFISVSIFMLDSVLRIHYEGIFRCDSSYLSNRWSQFSVFISIIHLL 132
>AF045640-7|AAU05589.1| 978|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
b protein.
Length = 978
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -2
Query: 449 QTLQYLIVS*IYFYLISFLHNVVTVFYFE--FIADSAYVPSLWSGSRYFIPLFQYL 288
Q L Y+I++ + + F+ + V ++E F DS+Y+ + WS FI + L
Sbjct: 135 QPLNYIILAADFISVSIFMLDSVLRIHYEGIFRCDSSYLSNRWSQFSVFISIIHLL 190
>AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
a protein.
Length = 1562
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -2
Query: 449 QTLQYLIVS*IYFYLISFLHNVVTVFYFE--FIADSAYVPSLWSGSRYFIPLFQYL 288
Q L Y+I++ + + F+ + V ++E F DS+Y+ + WS FI + L
Sbjct: 135 QPLNYIILAADFISVSIFMLDSVLRIHYEGIFRCDSSYLSNRWSQFSVFISIIHLL 190
>AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
c protein.
Length = 1913
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -2
Query: 449 QTLQYLIVS*IYFYLISFLHNVVTVFYFE--FIADSAYVPSLWSGSRYFIPLFQYL 288
Q L Y+I++ + + F+ + V ++E F DS+Y+ + WS FI + L
Sbjct: 135 QPLNYIILAADFISVSIFMLDSVLRIHYEGIFRCDSSYLSNRWSQFSVFISIIHLL 190
>AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
d protein.
Length = 1861
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -2
Query: 449 QTLQYLIVS*IYFYLISFLHNVVTVFYFE--FIADSAYVPSLWSGSRYFIPLFQYL 288
Q L Y+I++ + + F+ + V ++E F DS+Y+ + WS FI + L
Sbjct: 107 QPLNYIILAADFISVSIFMLDSVLRIHYEGIFRCDSSYLSNRWSQFSVFISIIHLL 162
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,466,093
Number of Sequences: 27780
Number of extensions: 269655
Number of successful extensions: 718
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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