Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV1c09r
         (917 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069733-1|AAL39878.1|  541|Drosophila melanogaster LP05116p pro...    71   3e-12
AE014296-2793|AAF49418.2|  541|Drosophila melanogaster CG9701-PA...    71   3e-12
BT029984-1|ABM92858.1|  766|Drosophila melanogaster LP16193p pro...    30   5.1  

>AY069733-1|AAL39878.1|  541|Drosophila melanogaster LP05116p
           protein.
          Length = 541

 Score = 70.5 bits (165), Expect = 3e-12
 Identities = 32/65 (49%), Positives = 42/65 (64%)
 Frame = -3

Query: 855 NDPIFYVTENGWATSPEVGLEDDDRITYYRAALENILDSLDAGVRLKGYMAWSLMDNYEW 676
           N P   VTENG   S   GLED  R+ YY   L  +LD+++ G  + GY+AWSLMD+YEW
Sbjct: 397 NAPEIIVTENG--VSDRGGLEDYARVDYYNLYLSAVLDAMEDGANISGYIAWSLMDSYEW 454

Query: 675 MAGYT 661
            AG++
Sbjct: 455 KAGFS 459



 Score = 50.8 bits (116), Expect = 3e-06
 Identities = 21/42 (50%), Positives = 29/42 (69%)
 Frame = -3

Query: 204 SERFGLYEVDFSDPARPRTPRKSAFVYKEILRSRVIDHDYEP 79
           SE+FGLY VDF+ P R RTP+ SA V+ ++ ++  ID  Y P
Sbjct: 459 SEKFGLYHVDFNSPQRTRTPKISARVFAQLCKTNTIDWSYRP 500


>AE014296-2793|AAF49418.2|  541|Drosophila melanogaster CG9701-PA
           protein.
          Length = 541

 Score = 70.5 bits (165), Expect = 3e-12
 Identities = 32/65 (49%), Positives = 42/65 (64%)
 Frame = -3

Query: 855 NDPIFYVTENGWATSPEVGLEDDDRITYYRAALENILDSLDAGVRLKGYMAWSLMDNYEW 676
           N P   VTENG   S   GLED  R+ YY   L  +LD+++ G  + GY+AWSLMD+YEW
Sbjct: 397 NAPEIIVTENG--VSDRGGLEDYARVDYYNLYLSAVLDAMEDGANISGYIAWSLMDSYEW 454

Query: 675 MAGYT 661
            AG++
Sbjct: 455 KAGFS 459



 Score = 50.8 bits (116), Expect = 3e-06
 Identities = 21/42 (50%), Positives = 29/42 (69%)
 Frame = -3

Query: 204 SERFGLYEVDFSDPARPRTPRKSAFVYKEILRSRVIDHDYEP 79
           SE+FGLY VDF+ P R RTP+ SA V+ ++ ++  ID  Y P
Sbjct: 459 SEKFGLYHVDFNSPQRTRTPKISARVFAQLCKTNTIDWSYRP 500


>BT029984-1|ABM92858.1|  766|Drosophila melanogaster LP16193p
           protein.
          Length = 766

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = +1

Query: 505 PVRHTYVCRLHPCHYWFPW-PVPTHQQMVHNA 597
           P R  ++C LH  H W  W P P H++   +A
Sbjct: 60  PQRQAFLCPLHRGHLWAVWCPPPPHRRRFWSA 91


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,354,034
Number of Sequences: 53049
Number of extensions: 845003
Number of successful extensions: 1925
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1925
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4505424660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)