Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV1c09f
         (744 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3LQJ4 Cluster: Member of triose phosphate translocator...    35   1.8  
UniRef50_Q97KT7 Cluster: Uncharacterized conserved membrane prot...    34   4.2  
UniRef50_A0EAZ8 Cluster: Chromosome undetermined scaffold_87, wh...    33   5.6  
UniRef50_Q22A56 Cluster: Cation channel family protein; n=2; Tet...    33   9.8  

>UniRef50_A3LQJ4 Cluster: Member of triose phosphate translocator
           family; n=3; Saccharomycetaceae|Rep: Member of triose
           phosphate translocator family - Pichia stipitis (Yeast)
          Length = 486

 Score = 35.1 bits (77), Expect = 1.8
 Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
 Frame = +2

Query: 317 DLSSSF*VILNNASLIDFDYFDD-TLILFCRIVGFLFSG*NFLLSELASL 463
           +++S F  I+N   L      D  T+IL+C +VGFLFS   F ++EL S+
Sbjct: 318 EVNSPFAYIINKFDLYQVAKPDKMTIILYCNLVGFLFSFGAFAVNELPSM 367


>UniRef50_Q97KT7 Cluster: Uncharacterized conserved membrane
           protein, similar to MDR (VANZ) ORF of Enterococcus; n=1;
           Clostridium acetobutylicum|Rep: Uncharacterized
           conserved membrane protein, similar to MDR (VANZ) ORF of
           Enterococcus - Clostridium acetobutylicum
          Length = 308

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 17/55 (30%), Positives = 31/55 (56%)
 Frame = +2

Query: 143 KKLRNSTAFFKVLFSLIYIKTLPTVILVLFFK*IDFDFYLLVHSKADAPNVIPFK 307
           KK++N    FKV+   ++I  +  +  ++ FK I F      ++K+ + N+IPFK
Sbjct: 2   KKIKNKKKIFKVILFGLFIIYIIALFKIILFKSISFLQIFKGYNKSRSINLIPFK 56


>UniRef50_A0EAZ8 Cluster: Chromosome undetermined scaffold_87, whole
           genome shotgun sequence; n=4; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_87,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 632

 Score = 33.5 bits (73), Expect = 5.6
 Identities = 16/50 (32%), Positives = 28/50 (56%)
 Frame = -3

Query: 520 SNKEYKKRFVEKE*IGKICQGSQLT*KKILTRKKETHYSAK*NESIIKVV 371
           S K  K++   +E I K+CQ   +  KK+L  +K TH     + +I+K++
Sbjct: 460 SLKSVKQQISSQEEIDKVCQSDLIVGKKLLKFQKYTHQRVATHSNIMKII 509


>UniRef50_Q22A56 Cluster: Cation channel family protein; n=2;
           Tetrahymena thermophila SB210|Rep: Cation channel family
           protein - Tetrahymena thermophila SB210
          Length = 2629

 Score = 32.7 bits (71), Expect = 9.8
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -1

Query: 708 FLTKHESVNFYIYQRYIYEYVRISKILACLL 616
           FL+ ++  +FY  +RYIY+  +  KIL CL+
Sbjct: 301 FLSVNDLSHFYFQKRYIYQSYKFFKILLCLI 331


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 631,294,355
Number of Sequences: 1657284
Number of extensions: 11815972
Number of successful extensions: 23239
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23231
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60911752460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)