Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV1c08r
(834 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0997 + 7884974-7885043,7885689-7885975,7886056-7886311,788... 42 5e-04
11_06_0689 - 26294961-26294976,26295271-26295414,26295506-262959... 42 8e-04
04_04_0179 - 23342764-23342973,23343185-23343340,23343535-233435... 33 0.28
01_06_0675 + 31092877-31092916,31093349-31093503,31093570-310936... 33 0.28
04_04_0419 + 25086456-25086768,25087302-25087369,25087458-250876... 32 0.49
05_06_0116 - 25719030-25719458,25720138-25720301,25720390-257206... 32 0.65
02_04_0414 - 22685981-22686178,22686374-22686465,22686580-226866... 31 0.86
02_05_0540 + 29852109-29852195,29852304-29852477,29852585-298528... 31 1.1
03_02_0712 - 10600147-10600196,10600257-10600378,10600993-106014... 31 1.5
01_05_0108 + 18183250-18183336,18183451-18183962,18184074-181842... 31 1.5
06_03_0535 + 21897912-21898064,21898151-21898246,21898362-218984... 30 2.6
10_08_0526 + 18547154-18547197,18547320-18547467,18547558-185476... 29 3.5
02_02_0054 - 6398829-6399047,6399470-6399676,6399858-6400557,640... 29 4.6
07_03_0603 - 19890664-19890823,19891104-19891329,19891498-198916... 29 6.0
02_02_0157 - 7280335-7280541,7280656-7280762,7280918-7281097,728... 28 8.0
02_02_0088 - 6655493-6655601,6656057-6656259,6656382-6656594,665... 28 8.0
>01_01_0997 +
7884974-7885043,7885689-7885975,7886056-7886311,
7886455-7886537,7886634-7886687,7887941-7888012,
7889093-7889155,7889274-7889324,7889432-7889513,
7889606-7889701,7889774-7889944,7890024-7890130,
7890229-7890326,7890798-7891048,7891235-7891398,
7891689-7891979,7892067-7892377,7892477-7892655,
7893231-7893301
Length = 918
Score = 42.3 bits (95), Expect = 5e-04
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Frame = -3
Query: 820 FEDVLKDGTVLCQLINKLKPGSVPKI-------NTTGGQFKMMENITNFQSAIKAYGVPD 662
F +++G VLC+ INK++PG+VPK+ + F+ ENI NF A++ +P
Sbjct: 52 FVAAVRNGIVLCKAINKIQPGAVPKVVANASCDSQPSTAFQYFENIRNFLVAVQELKLP- 110
Query: 661 IDVFQTVDLWEKKDI 617
F+ DL EK +I
Sbjct: 111 --CFEASDL-EKDNI 122
>11_06_0689 -
26294961-26294976,26295271-26295414,26295506-26295909,
26296112-26296261,26296334-26296497,26296526-26296836,
26296948-26297084,26297276-26297416,26297821-26297867,
26297977-26298072,26298168-26298249,26298332-26298472,
26298607-26298702,26298809-26298877,26298959-26299030,
26299201-26299368,26299577-26299711,26299792-26299958,
26301213-26301369
Length = 898
Score = 41.5 bits (93), Expect = 8e-04
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Frame = -3
Query: 826 ELFEDVLKDGTVLCQLINKLKPGSVPKI-----NTTGG----QFKMMENITNFQSAIKAY 674
E F L++G VLC +NK++PGSVPK+ ++ G ++ EN+ NF ++
Sbjct: 82 EEFRLGLRNGIVLCNALNKVQPGSVPKVVEAPSDSADGAALCAYQYFENVRNFLMGLQDL 141
Query: 673 GVPDIDVFQTVDLWEKKDIAQVVSTLFAL 587
G+P F+ DL + +VV + +L
Sbjct: 142 GLP---TFEASDLEKGGKGVRVVDCVLSL 167
>04_04_0179 -
23342764-23342973,23343185-23343340,23343535-23343593,
23344150-23344226,23344309-23344587,23344800-23344885,
23344960-23345027,23345721-23345904,23346071-23346204,
23346776-23347039,23347613-23347677,23347833-23348407,
23348501-23348680,23348765-23348928,23349008-23349261,
23349405-23349562,23349808-23349948,23350176-23350282,
23350651-23350737,23350812-23350901,23350974-23351055,
23351370-23351561,23351748-23351816,23351959-23352294,
23352694-23352837,23352963-23353126,23353817-23353883
Length = 1463
Score = 33.1 bits (72), Expect = 0.28
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = -3
Query: 826 ELFEDVLKDGTVLCQLINKLKPGSVPKI 743
E F L++G VLC ++N + PG+VPK+
Sbjct: 51 EEFCVALRNGLVLCNVLNHVNPGAVPKV 78
>01_06_0675 +
31092877-31092916,31093349-31093503,31093570-31093677,
31094283-31094487,31094858-31094955,31095052-31095135,
31095227-31095304,31095462-31095554,31095646-31095675,
31095932-31096273,31096353-31096434,31096527-31096622,
31096728-31096907,31097002-31097108,31097207-31097308,
31097611-31097666,31097749-31098002,31098077-31098240,
31098564-31098747,31098825-31098969,31099561-31099661,
31099803-31099870
Length = 923
Score = 33.1 bits (72), Expect = 0.28
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = -3
Query: 826 ELFEDVLKDGTVLCQLINKLKPGSVPKINTTGGQFK-MMENITNFQSAIKAYGVPDIDVF 650
E D L +G LC + +KL PG + T GG N+ F S + G+P F
Sbjct: 40 EELRDYLINGEALCYVADKLMPGVLE--GTWGGYASDQRSNVKKFLSVVAEMGLPG---F 94
Query: 649 QTVDLWEKKDIAQVVSTLFAL 587
DL E+ ++ +V L AL
Sbjct: 95 GVKDL-EEGSMSSIVECLLAL 114
>04_04_0419 +
25086456-25086768,25087302-25087369,25087458-25087681,
25087929-25088012,25088593-25088806,25089252-25089428,
25089526-25089645,25089865-25089991,25090104-25090130,
25090526-25091007
Length = 611
Score = 32.3 bits (70), Expect = 0.49
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -2
Query: 728 TVQNDGEHHKLPVCNQSIRCTRHRCVPNRRSMGEKRHRPSSQH 600
TV + HHKL Q I R R + +S G+ R + QH
Sbjct: 461 TVNGNNAHHKLYATMQDIAVRRRRAIVQGKSWGKTRSQERQQH 503
>05_06_0116 -
25719030-25719458,25720138-25720301,25720390-25720643,
25720727-25720782,25721032-25721169,25721315-25721421,
25721502-25721681,25721757-25721852,25721926-25722007,
25722084-25722425,25722666-25722695,25722788-25722880,
25722963-25723040,25723122-25723222,25723833-25724058,
25724647-25724760,25724855-25725009,25725515-25725554
Length = 894
Score = 31.9 bits (69), Expect = 0.65
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = -3
Query: 814 DVLKDGTVLCQLINKLKPGSVPKI-NTTGGQFKMMENITNFQSAIKAYGVPDIDVFQTVD 638
++L DGTVLC ++N L PG + + + ++ F + + G+P F D
Sbjct: 44 ELLSDGTVLCHIVNALIPGVLEESWGAYASSDQHAGHVKKFLAVVADMGLPG---FSVKD 100
Query: 637 LWEKKDIAQVVSTLFAL 587
L E+ ++ VV L L
Sbjct: 101 L-EEGSMSGVVDCLLVL 116
>02_04_0414 -
22685981-22686178,22686374-22686465,22686580-22686676,
22686801-22686916,22687314-22687513,22687588-22687740,
22687960-22688171,22688403-22688519,22688613-22688687,
22688815-22688853,22689518-22689689,22689809-22690056,
22690151-22690324,22690418-22690504
Length = 659
Score = 31.5 bits (68), Expect = 0.86
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Frame = -3
Query: 814 DVLKDGTVLCQLINKLKPGSVPK--INT--TGGQFKMMENITNFQSAIKAYGVPDIDVFQ 647
++++DG +LC+LIN PG++ + INT ++ EN T ++ KA G +++
Sbjct: 161 NLVRDGVLLCKLINVAVPGTIDERAINTKKDPNPWERNENHTLCLNSAKAIGCTVVNI-G 219
Query: 646 TVDLWEKK 623
T DL E +
Sbjct: 220 TQDLIEAR 227
>02_05_0540 +
29852109-29852195,29852304-29852477,29852585-29852841,
29852954-29853125,29853513-29853551,29853647-29853715,
29853795-29853911,29854190-29854401,29854578-29854736,
29854810-29855009,29855100-29855266,29855346-29855442,
29855560-29855651,29855861-29856139
Length = 706
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Frame = -3
Query: 826 ELFEDVLKDGTVLCQLINKLKPGSVPK--INTTG--GQFKMMENITNFQSAIKAYGVPDI 659
+LF D+++DG +LC+LIN PG++ + IN ++ EN T ++ KA G +
Sbjct: 161 QLF-DLVRDGVLLCKLINLAVPGTIDERAINKKRVLNPWERNENHTLCLNSAKAIGCTVV 219
Query: 658 DVFQTVDLWE 629
++ T DL E
Sbjct: 220 NI-GTQDLVE 228
>03_02_0712 -
10600147-10600196,10600257-10600378,10600993-10601489,
10601663-10601851,10601936-10602099,10602193-10602446,
10602535-10602691,10602830-10602995,10603121-10603227,
10603305-10603478,10603594-10603689,10603781-10603862,
10603948-10604058,10604253-10604309,10604638-10604709,
10604799-10605041,10605195-10605341,10605381-10605616,
10605745-10605865
Length = 1014
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -3
Query: 826 ELFEDVLKDGTVLCQLINKLKPGSVPK 746
E F L++G +LC +N++ PG+VPK
Sbjct: 70 EEFRLGLRNGQILCGALNRVHPGAVPK 96
>01_05_0108 +
18183250-18183336,18183451-18183962,18184074-18184245,
18184984-18185022,18185117-18185185,18185281-18185397,
18185842-18186056,18187085-18187240,18187328-18187527,
18187927-18188084,18188321-18188417,18188738-18188829,
18189018-18189191
Length = 695
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = -3
Query: 805 KDGTVLCQLINKLKPGSVPK--INTTG--GQFKMMENITNFQSAIKAYGVPDIDVFQTVD 638
KDG +LC+LIN PG++ + INT ++ EN T ++ KA G +++ T D
Sbjct: 194 KDGVLLCKLINLAVPGTIDERAINTKKLLNLWEKNENHTLCLNSAKAIGCTVVNI-GTQD 252
Query: 637 LWE 629
L E
Sbjct: 253 LAE 255
>06_03_0535 +
21897912-21898064,21898151-21898246,21898362-21898474,
21898590-21898656,21898741-21898833,21898968-21899111,
21899693-21899781,21899910-21900015,21900119-21900206,
21900304-21900422,21900913-21901247,21901824-21901933,
21902070-21902179,21902303-21902413,21902870-21903174,
21903267-21903375
Length = 715
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 5/96 (5%)
Frame = -3
Query: 769 LKPGSVPKIN--TTGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVSTL 596
LK G P++ + G ++ N F +A Y P + V +W+ + ++S+
Sbjct: 478 LKSGQWPQLTVYSAGHSVQVFVNGQYFGNAYGGYDGPKLTYSGYVKMWQGSNKISILSSA 537
Query: 595 FALGRETYRHAEWSGPCLGP---KPADECKRDFSDE 497
L + W+ LGP +E KRD S +
Sbjct: 538 VGLPNVGTHYETWNIGVLGPVTLSGLNEGKRDLSKQ 573
>10_08_0526 +
18547154-18547197,18547320-18547467,18547558-18547604,
18548216-18548270,18548365-18548403,18548517-18548688,
18549135-18549201,18549378-18549434,18549637-18549873,
18551549-18551629,18551803-18551935
Length = 359
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Frame = -2
Query: 734 RWTVQNDGEHHKLPVCNQSIRCTRHRC---VPNRRSMGEKRHR 615
R TV N G ++ + CTRH C VP S G +H+
Sbjct: 135 RSTVSNQGNDREIEISETKGSCTRHLCNISVPLTVSTGSHKHK 177
>02_02_0054 -
6398829-6399047,6399470-6399676,6399858-6400557,
6400927-6401120
Length = 439
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/46 (23%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -3
Query: 571 RHAEWSGPCLGPKPAD---ECKRDFSDEVLKAGQTVIGLQAGSNKG 443
+++++ GPCL P D C++D++ + + + +G G+ G
Sbjct: 79 KNSKYKGPCLATNPIDRCWRCRKDWATDRKRLARCAMGFGRGATGG 124
>07_03_0603 -
19890664-19890823,19891104-19891329,19891498-19891636,
19891849-19891942,19892291-19892311,19892506-19892941,
19893133-19893280,19893369-19893476,19893543-19893659,
19893960-19894016,19894488-19894553,19895140-19895328,
19895410-19895523,19895684-19895766,19895857-19896322,
19896832-19897476
Length = 1022
Score = 28.7 bits (61), Expect = 6.0
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = -3
Query: 829 GELFEDVLKDGTVLCQLINKLKPGS--VPKINTTGGQF-KMMENITNFQSAIKAYGVP 665
G LFED L+DG +LC++I L + + K+ + K + N T IK G P
Sbjct: 409 GNLFED-LQDGIILCRIIQLLTSDASIILKVIAPSDTYKKRLHNCTMAIQYIKQAGFP 465
>02_02_0157 -
7280335-7280541,7280656-7280762,7280918-7281097,
7281182-7281277,7281378-7281459,7281553-7283037,
7283376-7283450,7283521-7283598,7283708-7283791,
7283885-7283965,7284073-7284291,7284398-7284648,
7284748-7284796
Length = 997
Score = 28.3 bits (60), Expect = 8.0
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = -3
Query: 808 LKDGTVLCQLINKLKPGSVPKINTTGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWE 629
L G +LC L+ +L PG++ +T +N+ F++A++ GV F DL E
Sbjct: 51 LATGRLLCALLRRLCPGALLDDAST-------DNVGRFRAAVERMGVAK---FSASDL-E 99
Query: 628 KKDIAQVVSTLFAL 587
+ + VV+ + AL
Sbjct: 100 RGQMTAVVNCILAL 113
>02_02_0088 -
6655493-6655601,6656057-6656259,6656382-6656594,
6656683-6656792,6656878-6656981,6657076-6657245,
6657337-6657501,6657584-6657702,6657853-6657940,
6658035-6658140,6658235-6658323,6658461-6658604,
6658715-6658807,6658906-6658972,6659116-6659228,
6659306-6659401,6659524-6659724
Length = 729
Score = 28.3 bits (60), Expect = 8.0
Identities = 17/82 (20%), Positives = 33/82 (40%), Gaps = 2/82 (2%)
Frame = -3
Query: 775 NKLKPGSVPKIN--TTGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVS 602
N L+ G P++ + G ++ N ++ S Y P + V +W+ + ++S
Sbjct: 490 NDLRSGQSPQLTVYSAGHSMQVFVNGKSYGSVYGGYDNPKLTYNGRVKMWQGSNKISILS 549
Query: 601 TLFALGRETYRHAEWSGPCLGP 536
+ L W+ LGP
Sbjct: 550 SAVGLPNVGNHFENWNVGVLGP 571
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,277,258
Number of Sequences: 37544
Number of extensions: 495688
Number of successful extensions: 1231
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1231
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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