Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV1c08r
(834 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical pr... 122 2e-28
AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein. 122 2e-28
AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin prot... 91 7e-19
AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin prot... 73 3e-13
U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protei... 71 1e-12
U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav (... 42 7e-04
U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav (... 42 7e-04
DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein. 42 7e-04
U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical pr... 31 0.77
U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein. 30 1.8
U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein. 30 1.8
U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein. 30 1.8
U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein. 30 1.8
U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein. 30 1.8
AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated... 30 1.8
AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated... 30 1.8
AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated... 30 1.8
U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z83219-8|CAD57688.1| 455|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z83219-7|CAB05698.2| 473|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z80217-11|CAD57698.1| 455|Caenorhabditis elegans Hypothetical p... 28 7.2
Z80217-10|CAB02296.2| 473|Caenorhabditis elegans Hypothetical p... 28 7.2
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 28 7.2
AC024204-2|ABA00163.1| 272|Caenorhabditis elegans Hypothetical ... 28 7.2
>Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical
protein F43G9.9 protein.
Length = 192
Score = 122 bits (295), Expect = 2e-28
Identities = 68/135 (50%), Positives = 90/135 (66%)
Frame = -3
Query: 811 VLKDGTVLCQLINKLKPGSVPKINTTGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLW 632
V +DG++LC L N LKPGSV K+NT+ FK MENI+ F + Y V ++FQTVDL+
Sbjct: 59 VFQDGSLLCTLANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEY-VQKSELFQTVDLY 117
Query: 631 EKKDIAQVVSTLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAGS 452
E +D V+ L +L R++ ++ SG LGPK A +R+++DE LKAG VIGLQ GS
Sbjct: 118 EGQDPNAVLICLASLARKSEKNFGRSG--LGPKEAQGDRREWTDEQLKAGHNVIGLQMGS 175
Query: 451 NKGATQSGQNLGAGR 407
NKGAT SG N+G R
Sbjct: 176 NKGATASGLNMGNTR 190
>AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein.
Length = 192
Score = 122 bits (295), Expect = 2e-28
Identities = 68/135 (50%), Positives = 90/135 (66%)
Frame = -3
Query: 811 VLKDGTVLCQLINKLKPGSVPKINTTGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLW 632
V +DG++LC L N LKPGSV K+NT+ FK MENI+ F + Y V ++FQTVDL+
Sbjct: 59 VFQDGSLLCTLANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEY-VQKSELFQTVDLY 117
Query: 631 EKKDIAQVVSTLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAGS 452
E +D V+ L +L R++ ++ SG LGPK A +R+++DE LKAG VIGLQ GS
Sbjct: 118 EGQDPNAVLICLASLARKSEKNFGRSG--LGPKEAQGDRREWTDEQLKAGHNVIGLQMGS 175
Query: 451 NKGATQSGQNLGAGR 407
NKGAT SG N+G R
Sbjct: 176 NKGATASGLNMGNTR 190
>AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin protein
2 protein.
Length = 203
Score = 91.5 bits (217), Expect = 7e-19
Identities = 57/141 (40%), Positives = 77/141 (54%), Gaps = 3/141 (2%)
Frame = -3
Query: 814 DVLKDGTVLCQLINKLKPGSVPKINTTGGQ-FKMMENITNFQSAIKAYGVPDIDVFQTVD 638
++LKDG +LC+LI KL P N F MMENI+NF +A K +GV +I FQTVD
Sbjct: 57 NLLKDGVMLCKLIEKLDPSCRVVYNKKPKMAFPMMENISNFLAAAKQFGVMEISCFQTVD 116
Query: 637 LWEKKDIAQVVSTLFALGRETY-RHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQ 461
L+E K +V+ L L R + P K A R F + V++ G+ VI LQ
Sbjct: 117 LYENKQCYKVIECLRLLAAVAQSRSSHLEHPAWVVKLAQSSPRQFPEAVMRRGEMVIPLQ 176
Query: 460 AGSNKGATQSGQN-LGAGRKI 401
G+NK A+Q G + G R+I
Sbjct: 177 YGTNKCASQKGMSPYGLPRQI 197
>AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin protein
4 protein.
Length = 154
Score = 72.9 bits (171), Expect = 3e-13
Identities = 35/81 (43%), Positives = 51/81 (62%)
Frame = -3
Query: 820 FEDVLKDGTVLCQLINKLKPGSVPKINTTGGQFKMMENITNFQSAIKAYGVPDIDVFQTV 641
F + LKDG LC+L+N +K GSV KI F +ENI F +A ++ GV D + FQ+V
Sbjct: 54 FREQLKDGQRLCKLVNAIKAGSVKKIMKPISNFNCLENINQFSTAARSLGVKDEETFQSV 113
Query: 640 DLWEKKDIAQVVSTLFALGRE 578
DL++ +D+ V TL +L R+
Sbjct: 114 DLFDGRDLFSVTVTLQSLARK 134
>U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protein 3
protein.
Length = 142
Score = 70.5 bits (165), Expect = 1e-12
Identities = 34/80 (42%), Positives = 49/80 (61%)
Frame = -3
Query: 820 FEDVLKDGTVLCQLINKLKPGSVPKINTTGGQFKMMENITNFQSAIKAYGVPDIDVFQTV 641
F ++LKDGT+LC+ N ++ GS+ K+ F MENI F K GVP+ + FQ+V
Sbjct: 51 FHNLLKDGTLLCKAANGIEAGSIKKVQKPISTFACMENINAFVEFAKKQGVPNEETFQSV 110
Query: 640 DLWEKKDIAQVVSTLFALGR 581
+L E +D+ V TL +LGR
Sbjct: 111 ELVEGRDLFSVCVTLLSLGR 130
>U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform a protein.
Length = 975
Score = 41.5 bits (93), Expect = 7e-04
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Frame = -3
Query: 820 FEDVLKDGTVLCQLINKLKPGSV--PKINTTG--GQFKMMENITNFQSAIKAY-GVPDID 656
F VL+DG +LC+L N L P + KI T F NI F K Y + D D
Sbjct: 32 FASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNNINYFAMFCKTYFNLEDAD 91
Query: 655 VFQTVDLWEKKDIAQVVSTL 596
+F DL+ +V+ TL
Sbjct: 92 LFTAEDLYYMNGFQKVLKTL 111
>U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform b protein.
Length = 1007
Score = 41.5 bits (93), Expect = 7e-04
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Frame = -3
Query: 820 FEDVLKDGTVLCQLINKLKPGSV--PKINTTG--GQFKMMENITNFQSAIKAY-GVPDID 656
F VL+DG +LC+L N L P + KI T F NI F K Y + D D
Sbjct: 64 FASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNNINYFAMFCKTYFNLEDAD 123
Query: 655 VFQTVDLWEKKDIAQVVSTL 596
+F DL+ +V+ TL
Sbjct: 124 LFTAEDLYYMNGFQKVLKTL 143
>DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein.
Length = 1007
Score = 41.5 bits (93), Expect = 7e-04
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Frame = -3
Query: 820 FEDVLKDGTVLCQLINKLKPGSV--PKINTTG--GQFKMMENITNFQSAIKAY-GVPDID 656
F VL+DG +LC+L N L P + KI T F NI F K Y + D D
Sbjct: 64 FASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNNINYFAMFCKTYFNLEDAD 123
Query: 655 VFQTVDLWEKKDIAQVVSTL 596
+F DL+ +V+ TL
Sbjct: 124 LFTAEDLYYMNGFQKVLKTL 143
>U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical
protein C14F11.2 protein.
Length = 638
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = -3
Query: 808 LKDGTVLCQLINKLKPGSVPKINTTGGQF---KMMENITNFQSAIKAYGVPDIDVFQTVD 638
L DG LC+ INKL P S+ ++T + N+ F + GVP+ + +D
Sbjct: 548 LSDGQELCKFINKLHPESISLASSTDSSIATTRSKMNVDRFLQYCRKIGVPETTLCSQMD 607
Query: 637 LWEKKDIAQVVSTLFALGR 581
+ K++ +V T+ + +
Sbjct: 608 IISKRNPQKVARTVLTVAK 626
>Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical
protein F09C3.1 protein.
Length = 1391
Score = 31.5 bits (68), Expect = 0.77
Identities = 24/95 (25%), Positives = 49/95 (51%), Gaps = 12/95 (12%)
Frame = -3
Query: 817 EDVLKDGTVLCQLINKLKPGSVP------------KINTTGGQFKMMENITNFQSAIKAY 674
E+ L++G +L +L N P VP + N ++ +NI ++ A+++
Sbjct: 71 EENLRNGVLLARLGNSFAPEVVPEKGIFDIRQEKYRQNDATPVYRHSDNIMQWRRAMESV 130
Query: 673 GVPDIDVFQTVDLWEKKDIAQVVSTLFALGRETYR 569
+P+I + +T D++E +++ + V LFAL +R
Sbjct: 131 RLPEIFIPETADVFEGRNM-KTVFCLFALATLLHR 164
>U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -3
Query: 601 TLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAGSNKGATQSGQ- 425
T F GR+ R G + PAD + +E ++ + ++ LQAG+NK +Q G
Sbjct: 93 TGFGSGRDVCRE----GVRVAQNPADLA--ELPEEKIRMSEGIVRLQAGTNKYDSQKGMT 146
Query: 424 NLGAGRK 404
G GR+
Sbjct: 147 GFGTGRR 153
>U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein.
Length = 565
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -3
Query: 601 TLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAGSNKGATQSGQ- 425
T F GR+ R G + PAD + +E ++ + ++ LQAG+NK +Q G
Sbjct: 301 TGFGSGRDVCRE----GVRVAQNPADLA--ELPEEKIRMSEGIVRLQAGTNKYDSQKGMT 354
Query: 424 NLGAGRK 404
G GR+
Sbjct: 355 GFGTGRR 361
>U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -3
Query: 601 TLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAGSNKGATQSGQ- 425
T F GR+ R G + PAD + +E ++ + ++ LQAG+NK +Q G
Sbjct: 110 TGFGSGRDVCRE----GVRVAQNPADLA--ELPEEKIRMSEGIVRLQAGTNKYDSQKGMT 163
Query: 424 NLGAGRK 404
G GR+
Sbjct: 164 GFGTGRR 170
>U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -3
Query: 601 TLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAGSNKGATQSGQ- 425
T F GR+ R G + PAD + +E ++ + ++ LQAG+NK +Q G
Sbjct: 93 TGFGSGRDVCRE----GVRVAQNPADLA--ELPEEKIRMSEGIVRLQAGTNKYDSQKGMT 146
Query: 424 NLGAGRK 404
G GR+
Sbjct: 147 GFGTGRR 153
>U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -3
Query: 601 TLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAGSNKGATQSGQ- 425
T F GR+ R G + PAD + +E ++ + ++ LQAG+NK +Q G
Sbjct: 110 TGFGSGRDVCRE----GVRVAQNPADLA--ELPEEKIRMSEGIVRLQAGTNKYDSQKGMT 163
Query: 424 NLGAGRK 404
G GR+
Sbjct: 164 GFGTGRR 170
>AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated
protein 87, isoform c protein.
Length = 544
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -3
Query: 601 TLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAGSNKGATQSGQ- 425
T F GR+ R G + PAD + +E ++ + ++ LQAG+NK +Q G
Sbjct: 280 TGFGSGRDVCRE----GVRVAQNPADLA--ELPEEKIRMSEGIVRLQAGTNKYDSQKGMT 333
Query: 424 NLGAGRK 404
G GR+
Sbjct: 334 GFGTGRR 340
>AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated
protein 87, isoform a protein.
Length = 565
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -3
Query: 601 TLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAGSNKGATQSGQ- 425
T F GR+ R G + PAD + +E ++ + ++ LQAG+NK +Q G
Sbjct: 301 TGFGSGRDVCRE----GVRVAQNPADLA--ELPEEKIRMSEGIVRLQAGTNKYDSQKGMT 354
Query: 424 NLGAGRK 404
G GR+
Sbjct: 355 GFGTGRR 361
>AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated
protein 87, isoform b protein.
Length = 374
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -3
Query: 601 TLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAGSNKGATQSGQ- 425
T F GR+ R G + PAD + +E ++ + ++ LQAG+NK +Q G
Sbjct: 110 TGFGSGRDVCRE----GVRVAQNPADLA--ELPEEKIRMSEGIVRLQAGTNKYDSQKGMT 163
Query: 424 NLGAGRK 404
G GR+
Sbjct: 164 GFGTGRR 170
>U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical
protein C53C9.2 protein.
Length = 397
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 499 EVLKAGQTVIGLQAGSNKGATQSG 428
E LK G T + QAG+NK TQ G
Sbjct: 20 EQLKGGNTFLSQQAGTNKFETQKG 43
>Z83219-8|CAD57688.1| 455|Caenorhabditis elegans Hypothetical
protein C31C9.1b protein.
Length = 455
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +3
Query: 609 TWAMSFFSHRSTVWNTSMSGTPYAL---IADW 695
++AM + + VW +S +GT Y L IADW
Sbjct: 378 SFAMQSYDGKKLVWGSSRNGTMYELNLFIADW 409
>Z83219-7|CAB05698.2| 473|Caenorhabditis elegans Hypothetical
protein C31C9.1a protein.
Length = 473
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +3
Query: 609 TWAMSFFSHRSTVWNTSMSGTPYAL---IADW 695
++AM + + VW +S +GT Y L IADW
Sbjct: 378 SFAMQSYDGKKLVWGSSRNGTMYELNLFIADW 409
>Z80217-11|CAD57698.1| 455|Caenorhabditis elegans Hypothetical
protein C31C9.1b protein.
Length = 455
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +3
Query: 609 TWAMSFFSHRSTVWNTSMSGTPYAL---IADW 695
++AM + + VW +S +GT Y L IADW
Sbjct: 378 SFAMQSYDGKKLVWGSSRNGTMYELNLFIADW 409
>Z80217-10|CAB02296.2| 473|Caenorhabditis elegans Hypothetical
protein C31C9.1a protein.
Length = 473
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +3
Query: 609 TWAMSFFSHRSTVWNTSMSGTPYAL---IADW 695
++AM + + VW +S +GT Y L IADW
Sbjct: 378 SFAMQSYDGKKLVWGSSRNGTMYELNLFIADW 409
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = -2
Query: 812 CPQGRHCSLPAHQQAEAWL-CPQ-DQHHRWTVQNDGEHHKLPVCNQSIRCTRHRCVP 648
C + C +P Q+ + CP + H+ + D + N + RCT HRC+P
Sbjct: 197 CESSKKC-IPLEQKCDGRRDCPDGEDEHQCETECDSKGG-----NATFRCTNHRCIP 247
>AC024204-2|ABA00163.1| 272|Caenorhabditis elegans Hypothetical
protein Y73B6A.6 protein.
Length = 272
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -2
Query: 749 QDQHHRWTVQNDGEHHKLPVCNQSIRCTRHRCVPNRRSM 633
QD + QN +H LP+ IRC RH C ++R +
Sbjct: 147 QDAENLAFFQNVARNHNLPL---PIRCHRHECKSDKRPL 182
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,077,226
Number of Sequences: 27780
Number of extensions: 429140
Number of successful extensions: 1154
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1149
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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