Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV1b23r
         (836 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069582-1|AAL39727.1|  214|Drosophila melanogaster LD32260p pro...    95   1e-19
AE014297-1760|AAF54989.1|  214|Drosophila melanogaster CG9288-PA...    95   1e-19
AE014134-3332|AAX52674.1|  389|Drosophila melanogaster CG33509-P...    29   6.0  

>AY069582-1|AAL39727.1|  214|Drosophila melanogaster LD32260p
           protein.
          Length = 214

 Score = 94.7 bits (225), Expect = 1e-19
 Identities = 49/155 (31%), Positives = 84/155 (54%)
 Frame = -1

Query: 473 DNLKTFTERYFSKRYLINVDGIKNNDMMIMFHSNRIALLSLAPSHSFFSKDENYKINFNI 294
           ++  +  +R+F++ Y    D        +++HSNRI L+ LAP H   ++  +  +NF+I
Sbjct: 35  EDYPSVVDRFFTRYYYFKGDV----PYQVLYHSNRICLICLAPEHPALAQGIS-SVNFDI 89

Query: 293 GKIDRLNNSVXXXXXXXXXXXXXXSVICKIEFSDESVFEVPCCMKGTLVEVNEELVQNPL 114
           G +DR  N V              S +  +  ++   ++VP C++G LVEVN  +V+ P 
Sbjct: 90  GNVDRSQNVVKGKGKKGGMILQAESTLALLTTANGGTYKVPSCIRGKLVEVNTAIVEEPK 149

Query: 113 LLKNMPDSDGFIAIMLASIAISEATKSELLTHEEY 9
           LL+ +P+  G+ AI+L  I   +A K+ LLT E+Y
Sbjct: 150 LLEQLPEGAGYFAILLPKIENCDAIKASLLTQEQY 184


>AE014297-1760|AAF54989.1|  214|Drosophila melanogaster CG9288-PA
           protein.
          Length = 214

 Score = 94.7 bits (225), Expect = 1e-19
 Identities = 49/155 (31%), Positives = 84/155 (54%)
 Frame = -1

Query: 473 DNLKTFTERYFSKRYLINVDGIKNNDMMIMFHSNRIALLSLAPSHSFFSKDENYKINFNI 294
           ++  +  +R+F++ Y    D        +++HSNRI L+ LAP H   ++  +  +NF+I
Sbjct: 35  EDYPSVVDRFFTRYYYFKGDV----PYQVLYHSNRICLICLAPEHPALAQGIS-SVNFDI 89

Query: 293 GKIDRLNNSVXXXXXXXXXXXXXXSVICKIEFSDESVFEVPCCMKGTLVEVNEELVQNPL 114
           G +DR  N V              S +  +  ++   ++VP C++G LVEVN  +V+ P 
Sbjct: 90  GNVDRSQNVVKGKGKKGGMILQAESTLALLTTANGGTYKVPSCIRGKLVEVNTAIVEEPK 149

Query: 113 LLKNMPDSDGFIAIMLASIAISEATKSELLTHEEY 9
           LL+ +P+  G+ AI+L  I   +A K+ LLT E+Y
Sbjct: 150 LLEQLPEGAGYFAILLPKIENCDAIKASLLTQEQY 184


>AE014134-3332|AAX52674.1|  389|Drosophila melanogaster CG33509-PA
           protein.
          Length = 389

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = -2

Query: 805 LCTRICHPILHTDECNIFIKKLVDCHLNHPFRKFIGYCND-YDRDMRKCLKAERLQRQ 635
           LC R C  IL   + +    KL+D HL       IGY  D Y   +R C + E + R+
Sbjct: 2   LCYRECQKILENAQESAVRVKLLDYHLVRDL-SAIGYLGDYYALTLRYCHEEEEIIRE 58


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,043,174
Number of Sequences: 53049
Number of extensions: 629697
Number of successful extensions: 1433
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1429
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3983256888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)