Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV1b22f
(539 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A4GUC7 Cluster: Mitochondrial 28S ribosomal protein S18... 288 6e-77
UniRef50_Q9VA81 Cluster: CG9688-PA; n=2; Sophophora|Rep: CG9688-... 143 2e-33
UniRef50_UPI00015B5CDD Cluster: PREDICTED: similar to mitochondr... 141 8e-33
UniRef50_Q7Q866 Cluster: ENSANGP00000012972; n=3; Endopterygota|... 135 5e-31
UniRef50_Q86QR9 Cluster: Mitochondrial ribosomal protein S18C; n... 112 6e-24
UniRef50_Q9Y3D5 Cluster: 28S ribosomal protein S18c, mitochondri... 109 3e-23
UniRef50_Q22483 Cluster: Putative uncharacterized protein; n=2; ... 107 2e-22
UniRef50_A4FVK9 Cluster: Si:ch211-85e10.6 protein; n=3; Clupeoce... 105 7e-22
UniRef50_Q4SYF4 Cluster: Chromosome undetermined SCAF12073, whol... 102 5e-21
UniRef50_UPI0000588E60 Cluster: PREDICTED: hypothetical protein;... 89 5e-17
UniRef50_UPI0000E2034A Cluster: PREDICTED: mitochondrial ribosom... 87 2e-16
UniRef50_A7RLH4 Cluster: Predicted protein; n=1; Nematostella ve... 79 6e-14
UniRef50_UPI0000E803CF Cluster: PREDICTED: similar to CGI-134 pr... 78 1e-13
UniRef50_Q5GSD5 Cluster: Ribosomal protein S18; n=1; Wolbachia e... 58 2e-07
UniRef50_Q73GZ6 Cluster: 30S ribosomal protein S18; n=9; Rickett... 56 4e-07
UniRef50_Q9WZ74 Cluster: 30S ribosomal protein S18; n=5; Bacteri... 55 1e-06
UniRef50_Q2GEY4 Cluster: Ribosomal protein S18; n=1; Neoricketts... 54 3e-06
UniRef50_Q1AXR1 Cluster: Ribosomal protein S18; n=2; Actinobacte... 52 6e-06
UniRef50_UPI0000D9F462 Cluster: PREDICTED: similar to 28S riboso... 51 1e-05
UniRef50_A7RW82 Cluster: Predicted protein; n=1; Nematostella ve... 51 2e-05
UniRef50_Q8R6M3 Cluster: 30S ribosomal protein S18; n=15; Bacter... 49 6e-05
UniRef50_Q9RY50 Cluster: 30S ribosomal protein S18; n=5; Deinoco... 49 8e-05
UniRef50_O66476 Cluster: 30S ribosomal protein S18; n=1; Aquifex... 48 1e-04
UniRef50_A5IY67 Cluster: 30S ribosomal protein S18; n=1; Mycopla... 47 2e-04
UniRef50_Q3KQG7 Cluster: MGC130639 protein; n=2; Xenopus laevis|... 47 3e-04
UniRef50_A7SIB5 Cluster: Predicted protein; n=1; Nematostella ve... 46 6e-04
UniRef50_Q566S7 Cluster: Mitochondrial ribosomal protein S18B; n... 46 7e-04
UniRef50_A4ZZ08 Cluster: Putative uncharacterized protein; n=1; ... 46 7e-04
UniRef50_Q8F5K4 Cluster: 30S ribosomal protein S18; n=5; Leptosp... 46 7e-04
UniRef50_UPI0000E4815D Cluster: PREDICTED: hypothetical protein;... 45 0.001
UniRef50_Q1E8Y0 Cluster: Putative uncharacterized protein; n=1; ... 45 0.001
UniRef50_Q9VIN9 Cluster: CG10757-PA, isoform A; n=2; Diptera|Rep... 45 0.001
UniRef50_Q5C271 Cluster: SJCHGC09615 protein; n=1; Schistosoma j... 45 0.001
UniRef50_A6Q466 Cluster: 30S ribosomal protein S18; n=6; Epsilon... 44 0.002
UniRef50_O68127 Cluster: 30S ribosomal protein S18; n=30; Bacter... 44 0.002
UniRef50_A5UQW9 Cluster: Ribosomal protein S18; n=4; Chloroflexa... 44 0.003
UniRef50_Q0UYG5 Cluster: Putative uncharacterized protein; n=1; ... 44 0.003
UniRef50_Q6AK01 Cluster: 30S ribosomal protein S18; n=43; Bacter... 44 0.003
UniRef50_UPI00015B4C10 Cluster: PREDICTED: similar to CG10757-PA... 43 0.004
UniRef50_Q68XR6 Cluster: 30S ribosomal protein S18; n=9; Rickett... 43 0.004
UniRef50_Q4FS20 Cluster: Ribosomal protein S18; n=24; Bacteria|R... 43 0.005
UniRef50_Q74FE3 Cluster: 30S ribosomal protein S18; n=6; Desulfu... 43 0.005
UniRef50_UPI0000D569FC Cluster: PREDICTED: similar to CG31450-PA... 42 0.007
UniRef50_Q8XZT6 Cluster: 30S ribosomal protein S18; n=59; Bacter... 42 0.007
UniRef50_Q8RIE4 Cluster: 30S ribosomal protein S18; n=3; Fusobac... 42 0.007
UniRef50_Q95PY4 Cluster: Putative uncharacterized protein; n=2; ... 42 0.009
UniRef50_Q92QZ8 Cluster: 30S ribosomal protein S18; n=26; Bacter... 42 0.012
UniRef50_Q9A7Q2 Cluster: 30S ribosomal protein S18; n=16; Bacter... 42 0.012
UniRef50_O51140 Cluster: 30S ribosomal protein S18; n=5; Spiroch... 42 0.012
UniRef50_Q98PW0 Cluster: 30S ribosomal protein S18; n=2; Bacteri... 41 0.016
UniRef50_Q9NVS2 Cluster: 28S ribosomal protein S18a, mitochondri... 41 0.021
UniRef50_O83100 Cluster: 30S ribosomal protein S18; n=1; Trepone... 41 0.021
UniRef50_P66466 Cluster: 30S ribosomal protein S18 2; n=11; Acti... 41 0.021
UniRef50_Q06SF9 Cluster: Chloroplast 30S ribosomal protein S18; ... 41 0.021
UniRef50_Q1V2A6 Cluster: Ribosomal protein S18; n=2; Candidatus ... 40 0.028
UniRef50_Q8IGA1 Cluster: SD13983p; n=4; Diptera|Rep: SD13983p - ... 40 0.028
UniRef50_Q9Y676 Cluster: 28S ribosomal protein S18b, mitochondri... 40 0.028
UniRef50_Q984T9 Cluster: 30S ribosomal protein S18; n=18; Bacter... 40 0.028
UniRef50_Q5YPR1 Cluster: 30S ribosomal protein S18 2; n=25; Acti... 40 0.028
UniRef50_Q4G3D9 Cluster: Chloroplast 30S ribosomal protein S18; ... 40 0.028
UniRef50_Q01QR5 Cluster: Ribosomal protein S18; n=1; Solibacter ... 40 0.037
UniRef50_Q295N6 Cluster: GA16258-PA; n=1; Drosophila pseudoobscu... 40 0.037
UniRef50_O53125 Cluster: 30S ribosomal protein S18; n=27; Actino... 40 0.037
UniRef50_A5FQL1 Cluster: Ribosomal protein S18; n=39; Bacteria|R... 40 0.048
UniRef50_Q4RD00 Cluster: Chromosome undetermined SCAF17702, whol... 39 0.085
UniRef50_Q00WA8 Cluster: Ribosomal protein S18; n=2; Ostreococcu... 39 0.085
UniRef50_Q75AN9 Cluster: ADL117Wp; n=1; Eremothecium gossypii|Re... 39 0.085
UniRef50_A2QFH9 Cluster: Function: ribosomal protein S18 is invo... 39 0.085
UniRef50_P21475 Cluster: 30S ribosomal protein S18; n=8; Bacteri... 39 0.085
UniRef50_Q04HQ5 Cluster: Ribosomal protein S18; n=3; Leuconostoc... 38 0.11
UniRef50_A4T5Z8 Cluster: Ribosomal protein S18; n=1; Mycobacteri... 38 0.11
UniRef50_A7TPN9 Cluster: Putative uncharacterized protein; n=1; ... 38 0.11
UniRef50_Q17JG5 Cluster: Mitochondrial ribosomal protein, S18B, ... 38 0.15
UniRef50_Q97CX4 Cluster: 30S ribosomal protein S18; n=7; Clostri... 38 0.15
UniRef50_O69301 Cluster: 30S ribosomal protein S18; n=20; Campyl... 38 0.15
UniRef50_Q64PH8 Cluster: 30S ribosomal protein S18; n=18; Bacter... 38 0.15
UniRef50_Q32RH2 Cluster: Chloroplast 30S ribosomal protein S18; ... 38 0.15
UniRef50_Q09B50 Cluster: Conserved domain protein; n=1; Stigmate... 38 0.20
UniRef50_Q9LML3 Cluster: F10K1.8 protein; n=2; Arabidopsis thali... 38 0.20
UniRef50_Q4WHB1 Cluster: 37S ribosomal protein S18, putative; n=... 37 0.26
UniRef50_Q8KAM3 Cluster: 30S ribosomal protein S18; n=9; Chlorob... 37 0.26
UniRef50_Q6BRX4 Cluster: Similar to CA1768|IPF7585 Candida albic... 37 0.34
UniRef50_Q2HGI0 Cluster: Putative uncharacterized protein; n=1; ... 37 0.34
UniRef50_Q7VBX4 Cluster: 30S ribosomal protein S18; n=39; cellul... 37 0.34
UniRef50_Q9Z6V4 Cluster: 30S ribosomal protein S18; n=37; Bacter... 37 0.34
UniRef50_Q1Q7I5 Cluster: Strongly similar to 30S ribosomal subun... 36 0.45
UniRef50_A3XLY2 Cluster: Ribosomal protein S18; n=10; Bacteroide... 36 0.45
UniRef50_Q872A7 Cluster: Putative uncharacterized protein B11O8.... 36 0.60
UniRef50_P47338 Cluster: 30S ribosomal protein S18; n=3; Mycopla... 36 0.60
UniRef50_A6BM60 Cluster: Chloroplast 30S ribosomal protein S18; ... 35 1.0
UniRef50_O74365 Cluster: SWI/SNF complex subunit Sol1; n=1; Schi... 35 1.0
UniRef50_A7EI68 Cluster: Putative uncharacterized protein; n=1; ... 35 1.0
UniRef50_Q74M26 Cluster: 30S ribosomal protein S18; n=126; Bacte... 35 1.0
UniRef50_Q0CHW2 Cluster: Putative uncharacterized protein; n=1; ... 35 1.4
UniRef50_A7M919 Cluster: Ribosomal protein S18; n=1; Cuscuta gro... 34 1.8
UniRef50_Q55D72 Cluster: Putative uncharacterized protein; n=1; ... 34 1.8
UniRef50_Q9USL7 Cluster: Mitochondrial ribosomal protein subunit... 34 1.8
UniRef50_Q6CPI8 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 34 1.8
UniRef50_A6SAJ6 Cluster: Putative uncharacterized protein; n=1; ... 34 1.8
UniRef50_P25459 Cluster: Chloroplast 30S ribosomal protein S18; ... 34 1.8
UniRef50_P56353 Cluster: Chloroplast 30S ribosomal protein S18; ... 34 1.8
UniRef50_Q4N807 Cluster: Putative uncharacterized protein; n=2; ... 34 2.4
UniRef50_O76894 Cluster: CG14796-PA; n=1; Drosophila melanogaste... 34 2.4
UniRef50_Q59KY7 Cluster: Likely mitochondrial ribosomal protein ... 34 2.4
UniRef50_UPI00006CBE01 Cluster: Choline/ethanolamine kinase fami... 33 3.2
UniRef50_Q4A5M9 Cluster: 30S ribosomal protein S18; n=1; Mycopla... 33 3.2
UniRef50_A6DQM1 Cluster: 30S ribosomal protein S18; n=1; Lentisp... 33 3.2
UniRef50_Q248D3 Cluster: ATPase, histidine kinase-, DNA gyrase B... 33 3.2
UniRef50_A6R1Y9 Cluster: Predicted protein; n=1; Ajellomyces cap... 33 3.2
UniRef50_Q83IC1 Cluster: 30S ribosomal protein S18; n=3; Microco... 33 3.2
UniRef50_Q6KI65 Cluster: 30S ribosomal protein S18; n=9; Firmicu... 33 3.2
UniRef50_Q1KVT1 Cluster: Chloroplast 30S ribosomal protein S18; ... 33 3.2
UniRef50_O20032 Cluster: Chloroplast 30S ribosomal protein S18; ... 33 3.2
UniRef50_A7AS43 Cluster: Ribosomal protein S18, putative; n=1; B... 33 4.2
UniRef50_A3LXC6 Cluster: Predicted protein; n=1; Pichia stipitis... 33 4.2
UniRef50_Q06FK5 Cluster: Chloroplast 30S ribosomal protein S18; ... 33 4.2
UniRef50_Q9TM39 Cluster: Chloroplast 30S ribosomal protein S18; ... 33 4.2
UniRef50_A5FFZ4 Cluster: Putative uncharacterized protein precur... 33 5.6
UniRef50_UPI0000519D81 Cluster: PREDICTED: similar to mitochondr... 32 7.3
UniRef50_Q8D8D1 Cluster: Saccharopine dehydrogenase; n=38; Gamma... 32 7.3
UniRef50_Q30QQ5 Cluster: Putative uncharacterized protein; n=1; ... 32 7.3
UniRef50_A6YGA0 Cluster: Chloroplast 30S ribosomal protein S18; ... 32 7.3
UniRef50_A0BWB0 Cluster: Chromosome undetermined scaffold_131, w... 32 7.3
UniRef50_Q9PPT8 Cluster: 30S ribosomal protein S18; n=72; Bacter... 32 7.3
UniRef50_A0Q4A6 Cluster: D-alanine-D-alanine ligase B; n=7; Fran... 32 9.7
UniRef50_P40033 Cluster: 37S ribosomal protein RSM18, mitochondr... 32 9.7
>UniRef50_A4GUC7 Cluster: Mitochondrial 28S ribosomal protein S18c;
n=1; Bombyx mori|Rep: Mitochondrial 28S ribosomal
protein S18c - Bombyx mori (Silk moth)
Length = 137
Score = 288 bits (706), Expect = 6e-77
Identities = 133/137 (97%), Positives = 134/137 (97%)
Frame = +3
Query: 75 MKMALFKSFFARQMXSTHQAVLSTIRTQSTNLKPDPDAPVEMENPFKKELKQXILCKLNI 254
MKMALFKSFFARQM STHQAVLSTIRTQS+NLKPDPDAPVEMENPFKKELKQ ILCKLNI
Sbjct: 1 MKMALFKSFFARQMLSTHQAVLSTIRTQSSNLKPDPDAPVEMENPFKKELKQCILCKLNI 60
Query: 255 DPDYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYKHKIFL 434
DPDYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQD AYMPYTYKHKIFL
Sbjct: 61 DPDYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDFAYMPYTYKHKIFL 120
Query: 435 KDPKLFDPENPVRSHRF 485
KDPKLFDPENPVRSHRF
Sbjct: 121 KDPKLFDPENPVRSHRF 137
>UniRef50_Q9VA81 Cluster: CG9688-PA; n=2; Sophophora|Rep: CG9688-PA
- Drosophila melanogaster (Fruit fly)
Length = 140
Score = 143 bits (347), Expect = 2e-33
Identities = 64/103 (62%), Positives = 81/103 (78%)
Frame = +3
Query: 177 DPDAPVEMENPFKKELKQXILCKLNIDPDYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQ 356
D D P++++NP++K+ +Q ILCK +I+P YKN +LLSQFQSPYTGRIY RHITGLCKR+Q
Sbjct: 38 DLDLPIDIKNPYEKDPQQCILCKHSIEPHYKNVKLLSQFQSPYTGRIYGRHITGLCKRRQ 97
Query: 357 MQVEQEITKAQDLAYMPYTYKHKIFLKDPKLFDPENPVRSHRF 485
QVEQ I +AQ MP +K FL+DPKLFDPE PVR H++
Sbjct: 98 EQVEQAILRAQQCLLMPGYHKDLDFLQDPKLFDPERPVRPHKY 140
>UniRef50_UPI00015B5CDD Cluster: PREDICTED: similar to mitochondrial
ribosomal protein, S18C, putative; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to mitochondrial
ribosomal protein, S18C, putative - Nasonia vitripennis
Length = 145
Score = 141 bits (342), Expect = 8e-33
Identities = 71/146 (48%), Positives = 98/146 (67%), Gaps = 3/146 (2%)
Frame = +3
Query: 57 LSINTYMKMALFKSF-FARQMXSTHQAVL--STIRTQSTNLKPDPDAPVEMENPFKKELK 227
+ I TY ++ ++F R + ++ + + S R Q ++ + + DAP+E+ENP+++E K
Sbjct: 1 MKILTYSRVLSDQAFSLLRNLSNSGRVSVYASQQRAQHSSAE-EADAPIELENPYQRERK 59
Query: 228 QXILCKLNIDPDYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMP 407
ILCK NIDPDYKN R LSQFQS +TGRIY RHITGLCK KQ +VE EITKAQ MP
Sbjct: 60 ICILCKHNIDPDYKNVRFLSQFQSRFTGRIYGRHITGLCKYKQERVENEITKAQHAGLMP 119
Query: 408 YTYKHKIFLKDPKLFDPENPVRSHRF 485
+ K ++ DPK+FD NP R H++
Sbjct: 120 FYNKEITYVNDPKIFDVNNPFRPHKY 145
>UniRef50_Q7Q866 Cluster: ENSANGP00000012972; n=3;
Endopterygota|Rep: ENSANGP00000012972 - Anopheles
gambiae str. PEST
Length = 149
Score = 135 bits (327), Expect = 5e-31
Identities = 62/102 (60%), Positives = 77/102 (75%), Gaps = 1/102 (0%)
Frame = +3
Query: 183 DAPVEM-ENPFKKELKQXILCKLNIDPDYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQM 359
D+PV + +NPF KE Q +LCK IDPDYKN +LLSQFQSPYTGR+Y R+ITGLCK +
Sbjct: 48 DSPVVLKDNPFAKERVQCVLCKHGIDPDYKNVQLLSQFQSPYTGRVYGRNITGLCKNRHE 107
Query: 360 QVEQEITKAQDLAYMPYTYKHKIFLKDPKLFDPENPVRSHRF 485
QVE+EI KAQ+ +MP +K FL DPKLFDPE +R H++
Sbjct: 108 QVEREIIKAQNAGFMPTYHKAVEFLNDPKLFDPEKAIRPHKY 149
>UniRef50_Q86QR9 Cluster: Mitochondrial ribosomal protein S18C; n=1;
Branchiostoma belcheri tsingtauense|Rep: Mitochondrial
ribosomal protein S18C - Branchiostoma belcheri
tsingtauense
Length = 179
Score = 112 bits (269), Expect = 6e-24
Identities = 54/99 (54%), Positives = 72/99 (72%), Gaps = 1/99 (1%)
Frame = +3
Query: 159 STNLKPDPDAPV-EMENPFKKELKQXILCKLNIDPDYKNYRLLSQFQSPYTGRIYPRHIT 335
STN D D P +ME+P+K+E+K+ ILC N++ YKN +LLSQF SPYTGRIY HIT
Sbjct: 48 STNETEDTDMPQRQMEDPYKEEVKRCILC--NVELSYKNPQLLSQFLSPYTGRIYGHHIT 105
Query: 336 GLCKRKQMQVEQEITKAQDLAYMPYTYKHKIFLKDPKLF 452
GLC +KQ +VE++I AQ L ++P +K I+ KDPK+F
Sbjct: 106 GLCDKKQAEVERQIRNAQYLGFLPVMHKDPIYWKDPKIF 144
>UniRef50_Q9Y3D5 Cluster: 28S ribosomal protein S18c, mitochondrial
precursor; n=11; Theria|Rep: 28S ribosomal protein S18c,
mitochondrial precursor - Homo sapiens (Human)
Length = 142
Score = 109 bits (263), Expect = 3e-23
Identities = 50/97 (51%), Positives = 69/97 (71%)
Frame = +3
Query: 159 STNLKPDPDAPVEMENPFKKELKQXILCKLNIDPDYKNYRLLSQFQSPYTGRIYPRHITG 338
S + + D P+ MENP+K+ LK+ ILC ++D YKN +LLSQF SP+TG IY RHITG
Sbjct: 41 SQQVSSNEDLPISMENPYKEPLKKCILCGKHVD--YKNVQLLSQFVSPFTGCIYGRHITG 98
Query: 339 LCKRKQMQVEQEITKAQDLAYMPYTYKHKIFLKDPKL 449
LC +KQ ++ + I +AQ + +MP TYK +LKDPK+
Sbjct: 99 LCGKKQKEITKAIKRAQIMGFMPVTYKDPAYLKDPKV 135
>UniRef50_Q22483 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 139
Score = 107 bits (256), Expect = 2e-22
Identities = 54/135 (40%), Positives = 78/135 (57%), Gaps = 1/135 (0%)
Frame = +3
Query: 84 ALFKSFFARQMXSTHQAVLSTIRTQSTNLKPDPDAPVEMEN-PFKKELKQXILCKLNIDP 260
+L +SF Q T + S+ TQ + D PV +EN P+ KE ++ LC ++
Sbjct: 7 SLVRSFIRPQ---TFRLCSSSSTTQGSPSVSSDDEPVILENNPYTKEPRKSFLCSTGVEL 63
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYKHKIFLKD 440
DYKN RLL QF S ++GR+Y RHITGLC + ++ + I K++ +MP K + +D
Sbjct: 64 DYKNSRLLQQFVSTFSGRVYDRHITGLCDENKKKLIEAIAKSRRAGFMPIFVKDPKYTRD 123
Query: 441 PKLFDPENPVRSHRF 485
PKLFDP P+R H F
Sbjct: 124 PKLFDPLKPIRPHSF 138
>UniRef50_A4FVK9 Cluster: Si:ch211-85e10.6 protein; n=3;
Clupeocephala|Rep: Si:ch211-85e10.6 protein - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 136
Score = 105 bits (252), Expect = 7e-22
Identities = 52/110 (47%), Positives = 72/110 (65%)
Frame = +3
Query: 120 STHQAVLSTIRTQSTNLKPDPDAPVEMENPFKKELKQXILCKLNIDPDYKNYRLLSQFQS 299
+T Q V S +Q D D P++MENP+K+ K ILC N+ D+KN +LLSQF S
Sbjct: 23 ATAQCVRSLTTSQQDPASKD-DMPIKMENPYKQPAKTCILC--NVTVDFKNVQLLSQFIS 79
Query: 300 PYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYKHKIFLKDPKL 449
P+TGRIY RHITGLC RKQ +V + I K++ + +M T K +F++DP +
Sbjct: 80 PHTGRIYGRHITGLCGRKQKEVTKAIKKSRSMGFMSVTLKDPLFIQDPDI 129
>UniRef50_Q4SYF4 Cluster: Chromosome undetermined SCAF12073, whole
genome shotgun sequence; n=5; Euteleostomi|Rep:
Chromosome undetermined SCAF12073, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 128
Score = 102 bits (245), Expect = 5e-21
Identities = 50/104 (48%), Positives = 67/104 (64%)
Frame = +3
Query: 138 LSTIRTQSTNLKPDPDAPVEMENPFKKELKQXILCKLNIDPDYKNYRLLSQFQSPYTGRI 317
L ++ S K D V+MENP+K+ K +LC N+ DYKN +LLSQF SP+TG+I
Sbjct: 22 LRSLTVTSDVAKQKDDMLVKMENPYKEPQKGCVLC--NVTVDYKNIQLLSQFISPHTGKI 79
Query: 318 YPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYKHKIFLKDPKL 449
Y RH TGLC KQ QV + I KAQ + +M T+KH F++DP +
Sbjct: 80 YGRHFTGLCGVKQKQVAKAIKKAQSMGFMSVTHKHPQFMRDPNI 123
>UniRef50_UPI0000588E60 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 195
Score = 89.4 bits (212), Expect = 5e-17
Identities = 40/85 (47%), Positives = 58/85 (68%)
Frame = +3
Query: 201 ENPFKKELKQXILCKLNIDPDYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEIT 380
E+P+K +++ ILCK + YKN +LLSQF SP TGRI+ RHIT LC+ +Q +V + +
Sbjct: 70 EDPYKLAVEKCILCKYQVPISYKNVQLLSQFVSPNTGRIFGRHITKLCEAQQRRVTKAVK 129
Query: 381 KAQDLAYMPYTYKHKIFLKDPKLFD 455
+A + +MP Y+ FLKDP L+D
Sbjct: 130 RAITMGFMPSQYRTTQFLKDPSLYD 154
>UniRef50_UPI0000E2034A Cluster: PREDICTED: mitochondrial ribosomal
protein S18C isoform 1; n=1; Pan troglodytes|Rep:
PREDICTED: mitochondrial ribosomal protein S18C isoform
1 - Pan troglodytes
Length = 125
Score = 87.4 bits (207), Expect = 2e-16
Identities = 41/84 (48%), Positives = 57/84 (67%)
Frame = +3
Query: 159 STNLKPDPDAPVEMENPFKKELKQXILCKLNIDPDYKNYRLLSQFQSPYTGRIYPRHITG 338
S + + D P+ MENP+K+ LK+ ILC ++D YKN +LLSQF SP+TG IY RHITG
Sbjct: 41 SQQVSSNEDLPISMENPYKEPLKKCILCGKHVD--YKNVQLLSQFVSPFTGCIYGRHITG 98
Query: 339 LCKRKQMQVEQEITKAQDLAYMPY 410
LC +KQ ++ + I +AQ + Y
Sbjct: 99 LCGKKQKEITKAIKRAQIMGKKEY 122
>UniRef50_A7RLH4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 158
Score = 79.0 bits (186), Expect = 6e-14
Identities = 37/75 (49%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Frame = +3
Query: 234 ILC--KLNIDPDYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMP 407
+LC + ++ DYKN RLLSQF S ++GRIY R +TGLC +KQ ++ I +A+ + MP
Sbjct: 84 LLCPKRTDVTIDYKNVRLLSQFISSHSGRIYNRRVTGLCDKKQKEITNAIKRARAIGLMP 143
Query: 408 YTYKHKIFLKDPKLF 452
T KH F DPKLF
Sbjct: 144 VTMKHPEFHNDPKLF 158
>UniRef50_UPI0000E803CF Cluster: PREDICTED: similar to CGI-134
protein; n=1; Gallus gallus|Rep: PREDICTED: similar to
CGI-134 protein - Gallus gallus
Length = 101
Score = 78.2 bits (184), Expect = 1e-13
Identities = 36/64 (56%), Positives = 46/64 (71%)
Frame = +3
Query: 150 RTQSTNLKPDPDAPVEMENPFKKELKQXILCKLNIDPDYKNYRLLSQFQSPYTGRIYPRH 329
R Q + D P+EMENP+++ K+ ILC +N+D YKN +LLSQF SPYTGRIY RH
Sbjct: 26 RLQHQQAAAESDLPIEMENPYEEPPKRCILCGINVD--YKNVQLLSQFVSPYTGRIYGRH 83
Query: 330 ITGL 341
ITG+
Sbjct: 84 ITGM 87
>UniRef50_Q5GSD5 Cluster: Ribosomal protein S18; n=1; Wolbachia
endosymbiont strain TRS of Brugia malayi|Rep: Ribosomal
protein S18 - Wolbachia sp. subsp. Brugia malayi (strain
TRS)
Length = 91
Score = 57.6 bits (133), Expect = 2e-07
Identities = 34/89 (38%), Positives = 47/89 (52%)
Frame = +3
Query: 153 TQSTNLKPDPDAPVEMENPFKKELKQXILCKLNIDPDYKNYRLLSQFQSPYTGRIYPRHI 332
T+ N D V FK+ + + D DYKN LLS+F S Y GRI PR +
Sbjct: 2 TKKRNNFNDSYVSVNNRTGFKRSKVCPLATSQDEDIDYKNTDLLSRFTSDY-GRILPRRL 60
Query: 333 TGLCKRKQMQVEQEITKAQDLAYMPYTYK 419
TG+C +KQ ++ I +A+ LA +PY K
Sbjct: 61 TGVCAKKQRKLRLAIIRARFLALVPYCTK 89
>UniRef50_Q73GZ6 Cluster: 30S ribosomal protein S18; n=9;
Rickettsiales|Rep: 30S ribosomal protein S18 - Wolbachia
pipientis wMel
Length = 91
Score = 56.4 bits (130), Expect = 4e-07
Identities = 28/55 (50%), Positives = 37/55 (67%)
Frame = +3
Query: 255 DPDYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYK 419
D DYKN LLS+F S Y GRI PR +TG+C +KQ ++ I +A+ LA +PY K
Sbjct: 36 DIDYKNIDLLSKFTSDY-GRILPRRLTGVCAKKQRKLRLAIIRARFLALIPYCTK 89
>UniRef50_Q9WZ74 Cluster: 30S ribosomal protein S18; n=5;
Bacteria|Rep: 30S ribosomal protein S18 - Thermotoga
maritima
Length = 75
Score = 54.8 bits (126), Expect = 1e-06
Identities = 26/67 (38%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Frame = +3
Query: 213 KKELKQXILCKLNID-PDYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQ 389
KK++K+ LC++ +D DYK+ RLLS+F + G+I P+ +TG C + Q V+ I +A+
Sbjct: 7 KKKIKKCRLCEMKLDYVDYKDTRLLSEFLTD-KGKIIPKRLTGNCSKHQRMVKVAIKRAR 65
Query: 390 DLAYMPY 410
+ +PY
Sbjct: 66 QMGLLPY 72
>UniRef50_Q2GEY4 Cluster: Ribosomal protein S18; n=1; Neorickettsia
sennetsu str. Miyayama|Rep: Ribosomal protein S18 -
Neorickettsia sennetsu (strain Miyayama)
Length = 73
Score = 53.6 bits (123), Expect = 3e-06
Identities = 30/80 (37%), Positives = 47/80 (58%)
Frame = +3
Query: 186 APVEMENPFKKELKQXILCKLNIDPDYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQV 365
APV++E+ + +LK D DYKN L+ +F +P GR+ R TGL +KQ ++
Sbjct: 2 APVDVESQVELDLKIE-------DFDYKNVALIKRFMTP-VGRVLSRRATGLSAKKQRKM 53
Query: 366 EQEITKAQDLAYMPYTYKHK 425
+E+ K + LA +PY +HK
Sbjct: 54 AKEVRKMKFLALVPYCDRHK 73
>UniRef50_Q1AXR1 Cluster: Ribosomal protein S18; n=2; Actinobacteria
(class)|Rep: Ribosomal protein S18 - Rubrobacter
xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 81
Score = 52.4 bits (120), Expect = 6e-06
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = +3
Query: 225 KQXILCKLNID-PDYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAY 401
K + CK NI+ DYK+Y +L +F S G+I R +TGLC + Q + + I +A+++A
Sbjct: 16 KVCVFCKENIEYVDYKDYNMLRRFTSE-RGKIRARRVTGLCPQHQRETARAIKRAREMAL 74
Query: 402 MPY 410
+PY
Sbjct: 75 LPY 77
>UniRef50_UPI0000D9F462 Cluster: PREDICTED: similar to 28S ribosomal
protein S18c, mitochondrial precursor (MRP-S18-c)
(Mrps18c) (MRP-S18-1); n=1; Macaca mulatta|Rep:
PREDICTED: similar to 28S ribosomal protein S18c,
mitochondrial precursor (MRP-S18-c) (Mrps18c)
(MRP-S18-1) - Macaca mulatta
Length = 105
Score = 51.2 bits (117), Expect = 1e-05
Identities = 26/56 (46%), Positives = 36/56 (64%)
Frame = +3
Query: 153 TQSTNLKPDPDAPVEMENPFKKELKQXILCKLNIDPDYKNYRLLSQFQSPYTGRIY 320
+Q + + D P MENP+K+ LK+ ILC ++ +YKN LLSQF SP+T IY
Sbjct: 38 SQYKQVSSNEDLPTPMENPYKEPLKKCILCGKHV--NYKNAWLLSQFVSPFTECIY 91
>UniRef50_A7RW82 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 244
Score = 50.8 bits (116), Expect = 2e-05
Identities = 22/63 (34%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Frame = +3
Query: 237 LCKLNIDPDY----KNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYM 404
+C++ ++ +Y K+ L+QF SP+TG I TG+C+++Q ++ I +AQD Y+
Sbjct: 156 VCRIRVEKNYEISSKDVSFLTQFMSPHTGEILHTGKTGVCRQQQKKLLHAIEEAQDKGYL 215
Query: 405 PYT 413
P+T
Sbjct: 216 PFT 218
>UniRef50_Q8R6M3 Cluster: 30S ribosomal protein S18; n=15;
Bacteria|Rep: 30S ribosomal protein S18 -
Thermoanaerobacter tengcongensis
Length = 89
Score = 49.2 bits (112), Expect = 6e-05
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +3
Query: 213 KKELKQXILCKLNIDP-DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQ 389
KK+ + C NID DYK+ L ++ + G+I PR ITG C R Q Q+ + I +A+
Sbjct: 21 KKKKRVCAFCADNIDRIDYKDVARLRKYITE-RGKILPRRITGNCARHQRQLTKAIKRAR 79
Query: 390 DLAYMPYT 413
+A +PYT
Sbjct: 80 QIALLPYT 87
>UniRef50_Q9RY50 Cluster: 30S ribosomal protein S18; n=5;
Deinococci|Rep: 30S ribosomal protein S18 - Deinococcus
radiodurans
Length = 92
Score = 48.8 bits (111), Expect = 8e-05
Identities = 28/73 (38%), Positives = 43/73 (58%)
Frame = +3
Query: 201 ENPFKKELKQXILCKLNIDPDYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEIT 380
+ P K ++ + +L I DYK+ ++L +F S TG+I PR TGL + Q ++ Q I
Sbjct: 18 KRPRKPKVDPFSIGELEIT-DYKDVKMLRRFVSD-TGKILPRRRTGLSAKHQRRIAQTIK 75
Query: 381 KAQDLAYMPYTYK 419
A+ LA +PYT K
Sbjct: 76 VARQLALLPYTEK 88
>UniRef50_O66476 Cluster: 30S ribosomal protein S18; n=1; Aquifex
aeolicus|Rep: 30S ribosomal protein S18 - Aquifex
aeolicus
Length = 72
Score = 48.0 bits (109), Expect = 1e-04
Identities = 24/62 (38%), Positives = 35/62 (56%)
Frame = +3
Query: 225 KQXILCKLNIDPDYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYM 404
K + C+ +PDYKNY L F + GRI R TGLC + Q ++ +I +A+ L +
Sbjct: 9 KVCMYCEQKREPDYKNYEELRNFLTE-RGRIKDRKQTGLCAKHQRRLAVQIKRARQLGLL 67
Query: 405 PY 410
PY
Sbjct: 68 PY 69
>UniRef50_A5IY67 Cluster: 30S ribosomal protein S18; n=1; Mycoplasma
agalactiae|Rep: 30S ribosomal protein S18 - Mycoplasma
agalactiae
Length = 107
Score = 47.2 bits (107), Expect = 2e-04
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +3
Query: 237 LCKLNID-PDYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYT 413
LC+ NI+ DYKN +++F S G+I P TG C R Q +V I +A+ +A +PYT
Sbjct: 19 LCETNIEYVDYKNVEFITKFISGI-GQIKPHVSTGTCARHQRKVANAIKRARFMALIPYT 77
Query: 414 YKHKIFLKDP 443
K KI + P
Sbjct: 78 -KDKIRVLAP 86
>UniRef50_Q3KQG7 Cluster: MGC130639 protein; n=2; Xenopus
laevis|Rep: MGC130639 protein - Xenopus laevis (African
clawed frog)
Length = 222
Score = 46.8 bits (106), Expect = 3e-04
Identities = 20/48 (41%), Positives = 31/48 (64%)
Frame = +3
Query: 264 YKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMP 407
YKN +LL QF P+TG +Y TG+C ++Q + + IT+A D ++P
Sbjct: 112 YKNVKLLQQFICPHTGIVYDPTTTGVCMKQQKVLMKVITEATDHGFLP 159
>UniRef50_A7SIB5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 201
Score = 46.0 bits (104), Expect = 6e-04
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +3
Query: 201 ENPFKKELKQXILCKLNIDPDYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEIT 380
+N K+ +C NI YK+ LSQF SP G + R TG+CK++Q+++E I
Sbjct: 80 DNAIVKDSVGCPICSRNIIFSYKDVLFLSQFLSP-EGNLLNRRQTGVCKKQQLKLENAIK 138
Query: 381 KAQDLAYM-PYTYKHKIFLKDPKLF 452
++ L + + ++F+K P F
Sbjct: 139 LSRRLGFTGKFIGFERVFIKTPGNF 163
>UniRef50_Q566S7 Cluster: Mitochondrial ribosomal protein S18B; n=3;
Danio rerio|Rep: Mitochondrial ribosomal protein S18B -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 242
Score = 45.6 bits (103), Expect = 7e-04
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +3
Query: 249 NIDPDYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYKHKI 428
NI YKN LL QF P TG ++ +TG+C ++Q + + I A+D + + H
Sbjct: 126 NIIIHYKNVNLLQQFFCPETGVVHDPTVTGVCMKQQKLLSKAIETAKDFGLLRAQFAHVD 185
Query: 429 FLKD 440
F K+
Sbjct: 186 FTKE 189
>UniRef50_A4ZZ08 Cluster: Putative uncharacterized protein; n=1;
Borrelia lonestari|Rep: Putative uncharacterized protein
- Borrelia lonestari
Length = 124
Score = 45.6 bits (103), Expect = 7e-04
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
Frame = +3
Query: 39 LHVCIFLSINTYMKMALFKSF-FARQMXSTHQAVLSTIRTQSTNLKPDPDAPVEMENPFK 215
+H+ + I M++ LF+S F + ++Q L + Q LK +P+ FK
Sbjct: 6 IHLKSLVLIMILMRIYLFRSLIFMYKDVDSNQRDLRSDGHQD-GLKKNPNFRF-----FK 59
Query: 216 KELKQXILCKLNIDPDYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDL 395
K K C ++ PDYK++ L +F + G+I PR ITG + Q + EI KA+ +
Sbjct: 60 K--KTCKFCDIDKVPDYKDFDFLKKFITDQ-GKILPRRITGTSAKHQRCLALEIKKARYM 116
Query: 396 AYMPYTYK 419
A +P+ K
Sbjct: 117 ALLPFVKK 124
>UniRef50_Q8F5K4 Cluster: 30S ribosomal protein S18; n=5;
Leptospira|Rep: 30S ribosomal protein S18 - Leptospira
interrogans
Length = 81
Score = 45.6 bits (103), Expect = 7e-04
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Frame = +3
Query: 189 PVEMENPFKKELKQXILCKLNIDPD------YKNYRLLSQFQSPYTGRIYPRHITGLCKR 350
P +N +KK++ C+ DP+ YKN LL +F + G+I PR ITG R
Sbjct: 5 PQRKQNKYKKKV-----CRFTADPELAKQINYKNIELLERFITN-RGKIIPRRITGTSAR 58
Query: 351 KQMQVEQEITKAQDLAYMPY 410
Q + +EI KA+ + +PY
Sbjct: 59 YQRVLAREIRKARSIGLLPY 78
>UniRef50_UPI0000E4815D Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 111
Score = 45.2 bits (102), Expect = 0.001
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Frame = +3
Query: 249 NIDPDYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYT----- 413
N+ YKN +LL QF P++ IY + TGLC+R+ + I KA+ +P++
Sbjct: 30 NLVLHYKNIKLLEQFICPHSWNIYSTYRTGLCRRQHKALCATIEKARQYGVLPFSVPYIE 89
Query: 414 YKHKIFLKD 440
YK++ + +D
Sbjct: 90 YKYEDYYQD 98
>UniRef50_Q1E8Y0 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 184
Score = 45.2 bits (102), Expect = 0.001
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Frame = +3
Query: 174 PDPDAPVEMENPFKKELKQX-ILCKLNIDP--DYKNYRLLSQFQSPYTGRIYPRHITGLC 344
P +P EM+ K+ + L +DP YKN+ ++S++ + GRI PR +TGL
Sbjct: 90 PHDLSPAEMKKWRKRHSPNIDVFDALAMDPLDQYKNFSIMSEYMTEM-GRIKPRSVTGLR 148
Query: 345 KRKQMQVEQEITKAQDLAYMPYTYKH 422
Q ++ + I +A L MP Y+H
Sbjct: 149 PVNQRKMAKAIRRAIGLGLMPSVYQH 174
>UniRef50_Q9VIN9 Cluster: CG10757-PA, isoform A; n=2; Diptera|Rep:
CG10757-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 204
Score = 44.8 bits (101), Expect = 0.001
Identities = 18/50 (36%), Positives = 31/50 (62%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPY 410
DY+N LL QF SP++G + TGLC++ +++ + +A+D Y+ Y
Sbjct: 134 DYRNTELLEQFISPHSGDVLSYSKTGLCQKSHLRLMVAVQQARDSGYLTY 183
>UniRef50_Q5C271 Cluster: SJCHGC09615 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09615 protein - Schistosoma
japonicum (Blood fluke)
Length = 228
Score = 44.8 bits (101), Expect = 0.001
Identities = 18/47 (38%), Positives = 32/47 (68%)
Frame = +3
Query: 264 YKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYM 404
+++ LL F +P + IYP TG+C+R++ ++QE+ KA+DL Y+
Sbjct: 146 HQHIELLKHFINPDSFEIYPSSKTGICRRQEKILQQEVEKARDLGYI 192
>UniRef50_A6Q466 Cluster: 30S ribosomal protein S18; n=6;
Epsilonproteobacteria|Rep: 30S ribosomal protein S18 -
Nitratiruptor sp. (strain SB155-2)
Length = 91
Score = 44.4 bits (100), Expect = 0.002
Identities = 24/70 (34%), Positives = 38/70 (54%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYKHKIFLKD 440
DYK+ L+ S +I PR +TG CK+ Q+ VE+ I +A+ A +PY K + +
Sbjct: 23 DYKDIELIKHSLSERY-KIMPRRLTGNCKKHQVMVEEAIKRARHAALVPYIVDRKRVIPN 81
Query: 441 PKLFDPENPV 470
P F+ P+
Sbjct: 82 P--FEELQPI 89
>UniRef50_O68127 Cluster: 30S ribosomal protein S18; n=30;
Bacteria|Rep: 30S ribosomal protein S18 - Rhodobacter
capsulatus (Rhodopseudomonas capsulata)
Length = 75
Score = 44.0 bits (99), Expect = 0.002
Identities = 22/53 (41%), Positives = 33/53 (62%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYK 419
DYK+ RLL ++ S G+I P IT + +KQ ++ Q I +A+ LA +PY K
Sbjct: 24 DYKDVRLLQRYISE-RGKIVPARITAVSAKKQRELAQAIKRARFLALLPYAVK 75
>UniRef50_A5UQW9 Cluster: Ribosomal protein S18; n=4;
Chloroflexaceae|Rep: Ribosomal protein S18 - Roseiflexus
sp. RS-1
Length = 88
Score = 43.6 bits (98), Expect = 0.003
Identities = 22/56 (39%), Positives = 34/56 (60%)
Frame = +3
Query: 243 KLNIDPDYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPY 410
+L I PDYK+ L +F P TG+I PR TGL + Q ++ I +A+ +A +P+
Sbjct: 24 RLGILPDYKDPERLKRFLGP-TGKILPRRRTGLSAKMQRKLTIAIKRARHMALLPF 78
>UniRef50_Q0UYG5 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 260
Score = 43.6 bits (98), Expect = 0.003
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Frame = +3
Query: 246 LNIDP--DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYK 419
L I+P +YKN+ ++S++ + TGRI TGL + Q ++ + I +A L MP ++
Sbjct: 188 LGINPVSEYKNFTMMSEYMTE-TGRIKHSRDTGLRPKNQRKIAKAIRRAIGLGLMPSVHR 246
Query: 420 HKIFLK 437
H + LK
Sbjct: 247 HPLVLK 252
>UniRef50_Q6AK01 Cluster: 30S ribosomal protein S18; n=43;
Bacteria|Rep: 30S ribosomal protein S18 - Desulfotalea
psychrophila
Length = 81
Score = 43.6 bits (98), Expect = 0.003
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Frame = +3
Query: 207 PFKKELKQXILCKLNIDP----DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQE 374
P KK + +C+ D DYK+ ++L F S G+I PR I G C Q Q+ +
Sbjct: 5 PQKKLFTRKKVCRFCADKELVIDYKDVKVLRNFVSE-RGKIIPRRIVGTCASHQRQLCEA 63
Query: 375 ITKAQDLAYMPYT 413
+ +A+ +A +PY+
Sbjct: 64 VKRARQIALLPYS 76
>UniRef50_UPI00015B4C10 Cluster: PREDICTED: similar to CG10757-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG10757-PA - Nasonia vitripennis
Length = 208
Score = 43.2 bits (97), Expect = 0.004
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQD 392
D++N +LL+QF SPY G + TGLC+++ +E I +A+D
Sbjct: 136 DHRNTKLLNQFISPYNGELLQTKKTGLCRKQHENLEVAIYRAKD 179
>UniRef50_Q68XR6 Cluster: 30S ribosomal protein S18; n=9;
Rickettsieae|Rep: 30S ribosomal protein S18 - Rickettsia
typhi
Length = 95
Score = 43.2 bits (97), Expect = 0.004
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYKHK 425
DYKN LL +F S GR+ P IT +C +KQ ++ I A+ LA +P+ ++ K
Sbjct: 42 DYKNPELLIKFVSE-GGRMLPSRITNVCAKKQRKLNNAIKIARILALLPFVFQAK 95
>UniRef50_Q4FS20 Cluster: Ribosomal protein S18; n=24; Bacteria|Rep:
Ribosomal protein S18 - Psychrobacter arcticum
Length = 76
Score = 42.7 bits (96), Expect = 0.005
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYKHK 425
DYK+ LL Q+ S G+I P ITG + Q Q+ I +A+ L+ +PYT H+
Sbjct: 22 DYKDVELLKQYISD-NGKIVPSRITGTSTKYQRQLATAIKQARYLSLLPYTDNHQ 75
>UniRef50_Q74FE3 Cluster: 30S ribosomal protein S18; n=6;
Desulfuromonadales|Rep: 30S ribosomal protein S18 -
Geobacter sulfurreducens
Length = 103
Score = 42.7 bits (96), Expect = 0.005
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Frame = +3
Query: 138 LSTIRTQSTNLKPDPDAPVEM-ENPFKKE-LKQXILCKLNIDP----DYKNYRLLSQFQS 299
+S RT+ P+ P + P K+ ++ +C+ D DYK+ R+L F +
Sbjct: 1 MSEERTERPERTERPERPQQRGSGPRKRRPFQRRKVCRFCADKTLVIDYKDPRVLRSFIT 60
Query: 300 PYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYKHKI 428
G+I PR I+G C Q ++ + I +A+++A +P H I
Sbjct: 61 E-RGKIVPRRISGNCSAHQREITEAIKRARNIALIPIASTHVI 102
>UniRef50_UPI0000D569FC Cluster: PREDICTED: similar to CG31450-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG31450-PA - Tribolium castaneum
Length = 156
Score = 42.3 bits (95), Expect = 0.007
Identities = 24/70 (34%), Positives = 36/70 (51%)
Frame = +3
Query: 237 LCKLNIDPDYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTY 416
+C +D + + +LSQF G + PR +TGLCK++Q ++ +T A MP
Sbjct: 70 VCASGLDIKHTDVLILSQFVRS-DGCMLPRRVTGLCKKQQKRMSSLVTMAHKAGLMP-NL 127
Query: 417 KHKIFLKDPK 446
K KDPK
Sbjct: 128 KPSNSRKDPK 137
>UniRef50_Q8XZT6 Cluster: 30S ribosomal protein S18; n=59;
Bacteria|Rep: 30S ribosomal protein S18 - Ralstonia
solanacearum (Pseudomonas solanacearum)
Length = 92
Score = 42.3 bits (95), Expect = 0.007
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +3
Query: 195 EMENPFKKELKQXILCKLNIDP-DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQ 371
+ +NP K K ++ DYK+ L F G+I P +TG Q Q++
Sbjct: 15 QQQNPLFKRKKFCRFTVAGVEQIDYKDLDTLKDFIGE-NGKITPARLTGTRSHYQRQLDT 73
Query: 372 EITKAQDLAYMPYTYKHK 425
I +A+ LA MPYT +HK
Sbjct: 74 AIKRARFLALMPYTDQHK 91
>UniRef50_Q8RIE4 Cluster: 30S ribosomal protein S18; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S18 -
Fusobacterium nucleatum subsp. nucleatum
Length = 72
Score = 42.3 bits (95), Expect = 0.007
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYKHK 425
DYKN LL +F S G+I P +TG + Q ++ + + +A+++A +PYT K
Sbjct: 19 DYKNVELLKRFVSD-KGKINPSRLTGANAKLQRKIAKAVKRARNIALIPYTRTEK 72
>UniRef50_Q95PY4 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 183
Score = 41.9 bits (94), Expect = 0.009
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +3
Query: 219 ELKQXILCKLNIDPDYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKA 386
EL C + I YK+ +L QF G + PR +TGLCK++Q+++E+ + +A
Sbjct: 66 ELCSLCTCNVPIKLTYKDVLILEQFMRD-DGTVLPRQLTGLCKKQQLRMERCVMQA 120
>UniRef50_Q92QZ8 Cluster: 30S ribosomal protein S18; n=26;
Bacteria|Rep: 30S ribosomal protein S18 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 82
Score = 41.5 bits (93), Expect = 0.012
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPY 410
DYK+ RLL ++ S G+I P IT + ++KQ ++ Q I +A+ L +PY
Sbjct: 31 DYKDVRLLQRYISE-RGKIVPSRITAVSQKKQRELAQAIKRARFLGLLPY 79
>UniRef50_Q9A7Q2 Cluster: 30S ribosomal protein S18; n=16;
Bacteria|Rep: 30S ribosomal protein S18 - Caulobacter
crescentus (Caulobacter vibrioides)
Length = 92
Score = 41.5 bits (93), Expect = 0.012
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYK 419
DYK+ +LL ++ S G+I P IT + +KQ ++ + I +A+ LA +PY K
Sbjct: 41 DYKDVKLLQRYVSE-RGKIVPSRITAVSAKKQRELAKAIKRARFLALLPYVVK 92
>UniRef50_O51140 Cluster: 30S ribosomal protein S18; n=5;
Spirochaetaceae|Rep: 30S ribosomal protein S18 -
Borrelia burgdorferi (Lyme disease spirochete)
Length = 96
Score = 41.5 bits (93), Expect = 0.012
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = +3
Query: 240 CKLNIDPDYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYK 419
C PDYK++ L +F + G+I P+ ITG + Q ++ EI +A+ +A +P+ K
Sbjct: 38 CDSGKHPDYKDFDFLKKFITEQ-GKILPKRITGTSAKHQRRLALEIKRARYMALLPFVKK 96
>UniRef50_Q98PW0 Cluster: 30S ribosomal protein S18; n=2;
Bacteria|Rep: 30S ribosomal protein S18 - Mycoplasma
pulmonis
Length = 105
Score = 41.1 bits (92), Expect = 0.016
Identities = 20/69 (28%), Positives = 42/69 (60%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYKHKIFLKD 440
DYK+ LLS+F + + G+I P IT + ++Q + + I +A+++A +P+T + ++ +
Sbjct: 29 DYKDVELLSKFINSH-GKILPSKITDVSAKRQRMLTRAIKRARNMALLPFT-QERVRTQK 86
Query: 441 PKLFDPENP 467
P + +P
Sbjct: 87 PLIVTSNSP 95
>UniRef50_Q9NVS2 Cluster: 28S ribosomal protein S18a, mitochondrial
precursor; n=20; Euteleostomi|Rep: 28S ribosomal protein
S18a, mitochondrial precursor - Homo sapiens (Human)
Length = 196
Score = 40.7 bits (91), Expect = 0.021
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +3
Query: 189 PVEMENPFKKELKQXILCKLNIDP--DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQ 362
P E NP Q +C+ N+ +Y + LLSQF P+ G + PR ITGLC+ + +
Sbjct: 57 PKESPNP-PNPSGQCPICRWNLKHKYNYDDVLLLSQFIRPHGGML-PRKITGLCQEEHRK 114
Query: 363 VEQEITKAQDLAYMP 407
+E+ + A +P
Sbjct: 115 IEECVKMAHRAGLLP 129
>UniRef50_O83100 Cluster: 30S ribosomal protein S18; n=1; Treponema
pallidum|Rep: 30S ribosomal protein S18 - Treponema
pallidum
Length = 99
Score = 40.7 bits (91), Expect = 0.021
Identities = 23/84 (27%), Positives = 46/84 (54%)
Frame = +3
Query: 159 STNLKPDPDAPVEMENPFKKELKQXILCKLNIDPDYKNYRLLSQFQSPYTGRIYPRHITG 338
S+ + + AP + ++K++ + C + DYK+ L +F + G+I PR ITG
Sbjct: 15 SSPRESEESAPKKNRQFYRKKVCR--FCTQKLLADYKDPDTLRRFITE-RGKILPRRITG 71
Query: 339 LCKRKQMQVEQEITKAQDLAYMPY 410
C + Q +V E+ +++ +A +P+
Sbjct: 72 TCAKHQRRVALEVKRSRAVALLPF 95
>UniRef50_P66466 Cluster: 30S ribosomal protein S18 2; n=11;
Actinomycetales|Rep: 30S ribosomal protein S18 2 -
Mycobacterium bovis
Length = 88
Score = 40.7 bits (91), Expect = 0.021
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +3
Query: 225 KQXILCKLNIDP-DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAY 401
K+ +L L ++ DYK+ L F S G+I R +TGL ++Q QV Q I A+++A
Sbjct: 14 KKNLLDSLGVESVDYKDTATLRVFISD-RGKIRSRGVTGLTVQQQRQVAQAIKNAREMAL 72
Query: 402 MPY 410
+PY
Sbjct: 73 LPY 75
>UniRef50_Q06SF9 Cluster: Chloroplast 30S ribosomal protein S18;
n=2; Eukaryota|Rep: Chloroplast 30S ribosomal protein
S18 - Stigeoclonium helveticum (Green alga)
Length = 129
Score = 40.7 bits (91), Expect = 0.021
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYKHKIFLK 437
DYKN LL ++ +TG+I P+ TG+ ++Q + + I A+ L +P+ K K F +
Sbjct: 72 DYKNRSLLQEYIY-FTGKIIPKRKTGITTKQQRYLTKAIKTARILGLLPFVKKEKGFFR 129
>UniRef50_Q1V2A6 Cluster: Ribosomal protein S18; n=2; Candidatus
Pelagibacter ubique|Rep: Ribosomal protein S18 -
Candidatus Pelagibacter ubique HTCC1002
Length = 92
Score = 40.3 bits (90), Expect = 0.028
Identities = 19/46 (41%), Positives = 30/46 (65%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLA 398
DYKN RLL ++ S G+I P IT + ++KQ ++ I +A++LA
Sbjct: 46 DYKNIRLLKKYMSE-NGKILPSRITNVSQKKQRELSLSIKRARNLA 90
>UniRef50_Q8IGA1 Cluster: SD13983p; n=4; Diptera|Rep: SD13983p -
Drosophila melanogaster (Fruit fly)
Length = 155
Score = 40.3 bits (90), Expect = 0.028
Identities = 21/56 (37%), Positives = 31/56 (55%)
Frame = +3
Query: 240 CKLNIDPDYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMP 407
C L +D + + +LSQ+ G + PR ITGLC R+Q ++ +T AQ MP
Sbjct: 70 CTLGLDIKHTDVLILSQYVRS-DGCMLPRRITGLCHRQQKKMGTLVTMAQKAGLMP 124
>UniRef50_Q9Y676 Cluster: 28S ribosomal protein S18b, mitochondrial
precursor; n=25; Theria|Rep: 28S ribosomal protein S18b,
mitochondrial precursor - Homo sapiens (Human)
Length = 258
Score = 40.3 bits (90), Expect = 0.028
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPY 410
D++N +LL QF +TG I+ TG+C ++ ++ Q I KA+D + Y
Sbjct: 116 DFRNVKLLEQFVCAHTGIIFYAPYTGVCVKQHKRLTQAIQKARDHGLLIY 165
>UniRef50_Q984T9 Cluster: 30S ribosomal protein S18; n=18;
Bacteria|Rep: 30S ribosomal protein S18 - Rhizobium loti
(Mesorhizobium loti)
Length = 82
Score = 40.3 bits (90), Expect = 0.028
Identities = 19/53 (35%), Positives = 33/53 (62%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYK 419
DYK+ RLL ++ S G+I P IT + ++KQ ++ + I +A+ L +PY +
Sbjct: 31 DYKDVRLLQRYISE-RGKIVPSRITAVSQKKQRELAKAIKRARFLGLLPYVVR 82
>UniRef50_Q5YPR1 Cluster: 30S ribosomal protein S18 2; n=25;
Actinobacteridae|Rep: 30S ribosomal protein S18 2 -
Nocardia farcinica
Length = 84
Score = 40.3 bits (90), Expect = 0.028
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYT 413
DYK+ LL F S G+I R +TGL ++Q QV + A+++A +P+T
Sbjct: 33 DYKDVNLLRTFISD-RGKIRSRRVTGLTPQQQRQVAVAVKNAREMALLPFT 82
>UniRef50_Q4G3D9 Cluster: Chloroplast 30S ribosomal protein S18;
n=1; Emiliania huxleyi|Rep: Chloroplast 30S ribosomal
protein S18 - Emiliania huxleyi
Length = 72
Score = 40.3 bits (90), Expect = 0.028
Identities = 24/70 (34%), Positives = 40/70 (57%)
Frame = +3
Query: 201 ENPFKKELKQXILCKLNIDPDYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEIT 380
+NP K L + + LN YK+ +LS F + G+I PR +TGL ++Q +V + I
Sbjct: 3 KNPIKANLGEEVNNSLN----YKDVSILSNFVNEQ-GKILPRRLTGLKSKQQKKVTKLIK 57
Query: 381 KAQDLAYMPY 410
+A+ A +P+
Sbjct: 58 QARIAALLPF 67
>UniRef50_Q01QR5 Cluster: Ribosomal protein S18; n=1; Solibacter
usitatus Ellin6076|Rep: Ribosomal protein S18 -
Solibacter usitatus (strain Ellin6076)
Length = 99
Score = 39.9 bits (89), Expect = 0.037
Identities = 18/52 (34%), Positives = 33/52 (63%)
Frame = +3
Query: 255 DPDYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPY 410
D +YK+ ++L F + G+I PR I+G+C Q ++ I KA+++A +P+
Sbjct: 45 DINYKDVKMLHAFVAE-RGKIVPRRISGVCAPHQRRLTDAIKKARNIALLPF 95
>UniRef50_Q295N6 Cluster: GA16258-PA; n=1; Drosophila
pseudoobscura|Rep: GA16258-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 155
Score = 39.9 bits (89), Expect = 0.037
Identities = 21/56 (37%), Positives = 31/56 (55%)
Frame = +3
Query: 240 CKLNIDPDYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMP 407
C L +D + + +LSQ+ G + PR ITGLC R+Q ++ +T AQ MP
Sbjct: 70 CTLGLDIKHTDVLILSQYVRS-DGCMLPRRITGLCYRQQKKMGTLVTMAQKAGLMP 124
>UniRef50_O53125 Cluster: 30S ribosomal protein S18; n=27;
Actinobacteria (class)|Rep: 30S ribosomal protein S18 -
Mycobacterium leprae
Length = 84
Score = 39.9 bits (89), Expect = 0.037
Identities = 26/86 (30%), Positives = 41/86 (47%)
Frame = +3
Query: 156 QSTNLKPDPDAPVEMENPFKKELKQXILCKLNIDPDYKNYRLLSQFQSPYTGRIYPRHIT 335
+ST +P P+ P K K K N DYK+ LL + S G+I R +T
Sbjct: 3 KSTKRRPAPEKPA-------KARKCVFCAKKNQQIDYKDTTLLRTYISE-RGKIRARRVT 54
Query: 336 GLCKRKQMQVEQEITKAQDLAYMPYT 413
G C + Q + + A+++A +P+T
Sbjct: 55 GNCVQHQRDIAIAVKNAREVALLPFT 80
>UniRef50_A5FQL1 Cluster: Ribosomal protein S18; n=39; Bacteria|Rep:
Ribosomal protein S18 - Dehalococcoides sp. BAV1
Length = 147
Score = 39.5 bits (88), Expect = 0.048
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYKH 422
DYK+ L+++ S G+I PR TG C R Q + I +A+ +A MP+ +H
Sbjct: 36 DYKDSAKLARYISD-RGKIEPRRRTGTCARHQRALANAIKRARFIALMPFVSEH 88
>UniRef50_Q4RD00 Cluster: Chromosome undetermined SCAF17702, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF17702, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 242
Score = 38.7 bits (86), Expect = 0.085
Identities = 18/48 (37%), Positives = 30/48 (62%)
Frame = +3
Query: 249 NIDPDYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQD 392
NI ++N +LL QF SP+TG + TG+C ++Q ++ + I AQ+
Sbjct: 126 NIVVHHQNVKLLQQFISPHTGLVLDPTRTGVCMKQQKKLLEAIVTAQN 173
>UniRef50_Q00WA8 Cluster: Ribosomal protein S18; n=2;
Ostreococcus|Rep: Ribosomal protein S18 - Ostreococcus
tauri
Length = 135
Score = 38.7 bits (86), Expect = 0.085
Identities = 17/50 (34%), Positives = 31/50 (62%)
Frame = +3
Query: 264 YKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYT 413
+++ R L+QF S TG+IYP+ G+ + Q ++ + I A+ + +PYT
Sbjct: 74 FEDARFLTQFVSD-TGKIYPKRRLGVSAKAQRKISRAIKTARQMGILPYT 122
>UniRef50_Q75AN9 Cluster: ADL117Wp; n=1; Eremothecium gossypii|Rep:
ADL117Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 173
Score = 38.7 bits (86), Expect = 0.085
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Frame = +3
Query: 186 APVEMENPFKKELKQX-ILCKLNIDP-D-YKNYRLLSQFQSPYTGRIYPRHITGLCKRKQ 356
A + +E +K ++ I +LN+DP D Y + +LS+F TG+I R +TGL R Q
Sbjct: 81 ARLHLEKKHRKNARKVDIFEELNLDPLDLYTSPAILSRFVGN-TGKILHRDVTGLSVRSQ 139
Query: 357 MQVEQEITKAQDLAYMPYTYK 419
++ + + + Q + M T+K
Sbjct: 140 KRMSRAVRRCQAIGLMSKTHK 160
>UniRef50_A2QFH9 Cluster: Function: ribosomal protein S18 is
involved in the binding of fMet- tRNA precursor; n=4;
Trichocomaceae|Rep: Function: ribosomal protein S18 is
involved in the binding of fMet- tRNA precursor -
Aspergillus niger
Length = 221
Score = 38.7 bits (86), Expect = 0.085
Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Frame = +3
Query: 246 LNIDP-D-YKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYK 419
LN++P D YKN+ ++S++ + GRI R++TGL Q ++ + I +A L MP ++
Sbjct: 144 LNLNPLDLYKNFSVMSEYITSM-GRIKHRNMTGLRPVNQRKISKAIRRAVGLGLMPSVHR 202
Query: 420 H 422
H
Sbjct: 203 H 203
>UniRef50_P21475 Cluster: 30S ribosomal protein S18; n=8;
Bacteria|Rep: 30S ribosomal protein S18 - Bacillus
subtilis
Length = 79
Score = 38.7 bits (86), Expect = 0.085
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPY 410
DYK+ LL +F S G+I PR +TG + Q ++ I +A+ +A +PY
Sbjct: 27 DYKDVDLLKKFVSE-RGKILPRRVTGTNAKYQRKLTAAIKRARQMALLPY 75
>UniRef50_Q04HQ5 Cluster: Ribosomal protein S18; n=3;
Leuconostocaceae|Rep: Ribosomal protein S18 - Oenococcus
oeni (strain BAA-331 / PSU-1)
Length = 106
Score = 38.3 bits (85), Expect = 0.11
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPY 410
DYK+ LL +F + G+I PR ITG + Q ++ I +A+ +A +P+
Sbjct: 54 DYKDTELLQRFIAD-NGKILPRRITGTSSKNQRKIATAIKRARIMALLPF 102
>UniRef50_A4T5Z8 Cluster: Ribosomal protein S18; n=1; Mycobacterium
gilvum PYR-GCK|Rep: Ribosomal protein S18 -
Mycobacterium gilvum PYR-GCK
Length = 63
Score = 38.3 bits (85), Expect = 0.11
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPY 410
DYK+ L QF S G+I R +TGL ++Q QV + A+++A +PY
Sbjct: 11 DYKDTSTLRQFLSE-RGKIRSRTVTGLTVQQQRQVTIAVKNAREMALLPY 59
>UniRef50_A7TPN9 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 174
Score = 38.3 bits (85), Expect = 0.11
Identities = 21/66 (31%), Positives = 34/66 (51%)
Frame = +3
Query: 237 LCKLNIDPDYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTY 416
+C +N Y N LS F S TGRI R +TGL + Q ++ + + + Q + +P T
Sbjct: 101 VCGINPLDLYSNPEYLSHFLSS-TGRILHRDVTGLSVKNQRRMSKAVRRCQAIGLLPKTC 159
Query: 417 KHKIFL 434
+ F+
Sbjct: 160 RDSSFV 165
>UniRef50_Q17JG5 Cluster: Mitochondrial ribosomal protein, S18B,
putative; n=2; Endopterygota|Rep: Mitochondrial
ribosomal protein, S18B, putative - Aedes aegypti
(Yellowfever mosquito)
Length = 208
Score = 37.9 bits (84), Expect = 0.15
Identities = 14/50 (28%), Positives = 30/50 (60%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPY 410
D++N L+ QF S +G++ ITGLC+++ +++ + +A D + +
Sbjct: 141 DHRNTDLIKQFVSSQSGKVLSYQITGLCQKRHLELLVAVERAMDYGLITF 190
>UniRef50_Q97CX4 Cluster: 30S ribosomal protein S18; n=7;
Clostridiales|Rep: 30S ribosomal protein S18 -
Clostridium acetobutylicum
Length = 90
Score = 37.9 bits (84), Expect = 0.15
Identities = 17/51 (33%), Positives = 32/51 (62%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYT 413
DYK+ L ++ + G+I PR I+G C + Q ++ I +A+++A +P+T
Sbjct: 39 DYKDINKLRKYVTE-RGKILPRRISGNCAKHQRELTIAIKRARNIALLPFT 88
>UniRef50_O69301 Cluster: 30S ribosomal protein S18; n=20;
Campylobacterales|Rep: 30S ribosomal protein S18 -
Campylobacter jejuni
Length = 86
Score = 37.9 bits (84), Expect = 0.15
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYKHKIFLKD 440
DYK+ +L S +I PR +TG K+ Q VE I +A+ +A +PY K + +
Sbjct: 23 DYKDTAMLKHALSERF-KIMPRRLTGTSKKYQEMVEVAIKRARHVALIPYIVDRKEVINN 81
Query: 441 P 443
P
Sbjct: 82 P 82
>UniRef50_Q64PH8 Cluster: 30S ribosomal protein S18; n=18;
Bacteria|Rep: 30S ribosomal protein S18 - Bacteroides
fragilis
Length = 90
Score = 37.9 bits (84), Expect = 0.15
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPY 410
DYK+ L +F + G+I PR ITG + Q ++ Q + +A+ LA +P+
Sbjct: 36 DYKDPEFLKKFLNEQ-GKILPRRITGTSLKFQRRIAQAVKRARHLALLPF 84
>UniRef50_Q32RH2 Cluster: Chloroplast 30S ribosomal protein S18;
n=1; Zygnema circumcarinatum|Rep: Chloroplast 30S
ribosomal protein S18 - Zygnema circumcarinatum (Green
alga)
Length = 85
Score = 37.9 bits (84), Expect = 0.15
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPY 410
DYKN RLL +F S +I R ++ L ++Q V + I A+ LA+MP+
Sbjct: 32 DYKNLRLLCRFVSK-QAKILSRRVSRLTSKQQRTVARYIKSARVLAFMPF 80
>UniRef50_Q09B50 Cluster: Conserved domain protein; n=1; Stigmatella
aurantiaca DW4/3-1|Rep: Conserved domain protein -
Stigmatella aurantiaca DW4/3-1
Length = 109
Score = 37.5 bits (83), Expect = 0.20
Identities = 16/50 (32%), Positives = 32/50 (64%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPY 410
D+K+ +LL F + GR+ PR +TG+ ++Q Q+ + + +A+ L +P+
Sbjct: 56 DFKDVQLLKYFVTE-RGRLIPRRLTGVTAQQQRQIAKAVKRARLLGLLPF 104
>UniRef50_Q9LML3 Cluster: F10K1.8 protein; n=2; Arabidopsis
thaliana|Rep: F10K1.8 protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 261
Score = 37.5 bits (83), Expect = 0.20
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +3
Query: 180 PDAPVEMENPFKKELKQXILCKLNI-DPDYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQ 356
P +M+NP + K + + + + D++N R L+ F + G I R TG+ + Q
Sbjct: 148 PRMQKQMQNPRQNNSKSEVTTEEVLKNADFRNVRFLANFITE-AGIIIKRKQTGISAKAQ 206
Query: 357 MQVEQEITKAQDLAYMPYT 413
++ +EI A+ MP+T
Sbjct: 207 RKIAREIKTARAFGLMPFT 225
>UniRef50_Q4WHB1 Cluster: 37S ribosomal protein S18, putative; n=2;
Trichocomaceae|Rep: 37S ribosomal protein S18, putative
- Aspergillus fumigatus (Sartorya fumigata)
Length = 190
Score = 37.1 bits (82), Expect = 0.26
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Frame = +3
Query: 246 LNIDP-D-YKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYK 419
LN++P D YKN+ ++S++ + GRI R TGL Q ++ + I +A + MP ++
Sbjct: 113 LNLNPLDLYKNFSIMSEYMTAM-GRIKHRSATGLRPVNQRKIAKAIRRAIGIGLMPSVHR 171
Query: 420 H 422
H
Sbjct: 172 H 172
>UniRef50_Q8KAM3 Cluster: 30S ribosomal protein S18; n=9;
Chlorobiaceae|Rep: 30S ribosomal protein S18 -
Chlorobium tepidum
Length = 74
Score = 37.1 bits (82), Expect = 0.26
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPY 410
DY++ R L +F + G+I PR ITGL ++Q + I A+ LA +PY
Sbjct: 20 DYRDERKLKRFINDQ-GKIIPRRITGLSAKEQSLLTHSIKWARFLAIIPY 68
>UniRef50_Q6BRX4 Cluster: Similar to CA1768|IPF7585 Candida albicans
IPF7585; n=2; Saccharomycetaceae|Rep: Similar to
CA1768|IPF7585 Candida albicans IPF7585 - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 192
Score = 36.7 bits (81), Expect = 0.34
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +3
Query: 243 KLNIDP--DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTY 416
K +DP Y +LS+F S TG+I PR ITG + Q ++ I +A+ + +
Sbjct: 123 KAGVDPLDIYTMPEILSRFLSS-TGQILPREITGCNAKNQKKLSNAIKRARTCGLLSTVH 181
Query: 417 KHKIFL 434
KH +L
Sbjct: 182 KHSRYL 187
>UniRef50_Q2HGI0 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 236
Score = 36.7 bits (81), Expect = 0.34
Identities = 26/91 (28%), Positives = 47/91 (51%)
Frame = +3
Query: 165 NLKPDPDAPVEMENPFKKELKQXILCKLNIDPDYKNYRLLSQFQSPYTGRIYPRHITGLC 344
++KP + P KK++ IL +D +YKN+ L+S+F +P GRI + TGL
Sbjct: 127 DMKPAEMSKWRQGRPPKKDMVD-ILGFSPLD-NYKNFSLISEFVTP-MGRIRHSNDTGLR 183
Query: 345 KRKQMQVEQEITKAQDLAYMPYTYKHKIFLK 437
Q ++ + + +A + P ++H L+
Sbjct: 184 PVNQRKIAKAVRRAIGMGLHPSVHRHPEILR 214
>UniRef50_Q7VBX4 Cluster: 30S ribosomal protein S18; n=39; cellular
organisms|Rep: 30S ribosomal protein S18 -
Prochlorococcus marinus
Length = 73
Score = 36.7 bits (81), Expect = 0.34
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 255 DP-DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPY 410
DP DYK+ L +F + G+I PR +TGL ++Q + + +A+ +A +P+
Sbjct: 17 DPIDYKDVETLKKFITE-RGKILPRRLTGLTAKQQRDLTTAVKRARIIALLPF 68
>UniRef50_Q9Z6V4 Cluster: 30S ribosomal protein S18; n=37;
Bacteria|Rep: 30S ribosomal protein S18 - Chlamydia
pneumoniae (Chlamydophila pneumoniae)
Length = 82
Score = 36.7 bits (81), Expect = 0.34
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPY 410
DYK+ L +F + G++ PR ITG+ R Q + Q I +A+ L +P+
Sbjct: 30 DYKDVETLKKFITE-RGKVLPRRITGVSSRFQGVLSQAIKRARHLGLLPF 78
>UniRef50_Q1Q7I5 Cluster: Strongly similar to 30S ribosomal subunit
protein S18; n=1; Candidatus Kuenenia
stuttgartiensis|Rep: Strongly similar to 30S ribosomal
subunit protein S18 - Candidatus Kuenenia
stuttgartiensis
Length = 73
Score = 36.3 bits (80), Expect = 0.45
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +3
Query: 240 CKLNIDP-DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPY 410
C++ ++ DYK+ + L + + G+++ R +G C R Q V+ I +A+ +A +PY
Sbjct: 15 CRMGVEEVDYKDIQNLQKLATT-RGKLFSRKRSGNCARHQRSVKMSIKRARFMALLPY 71
>UniRef50_A3XLY2 Cluster: Ribosomal protein S18; n=10;
Bacteroidetes|Rep: Ribosomal protein S18 -
Leeuwenhoekiella blandensis MED217
Length = 99
Score = 36.3 bits (80), Expect = 0.45
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPY 410
DYK+ L+ F + G++ PR +TG + Q +V + +A+ LA MPY
Sbjct: 45 DYKDADWLASFVNEQ-GKLLPRRLTGTSLKYQRKVSVAVKRARHLALMPY 93
>UniRef50_Q872A7 Cluster: Putative uncharacterized protein
B11O8.090; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein B11O8.090 - Neurospora crassa
Length = 256
Score = 35.9 bits (79), Expect = 0.60
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYKHKIFLKD 440
+Y+N+ L+S + +P+ GRI TGL Q ++ + + +A L P +KH LK+
Sbjct: 169 NYRNFSLISDYITPF-GRIRHSKETGLKPVNQRKIAKMVRRAIGLGIHPSVHKHPEILKN 227
>UniRef50_P47338 Cluster: 30S ribosomal protein S18; n=3;
Mycoplasma|Rep: 30S ribosomal protein S18 - Mycoplasma
genitalium
Length = 105
Score = 35.9 bits (79), Expect = 0.60
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +3
Query: 210 FKKELKQXILCKLN-IDPDY-KNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITK 383
FK+ K C + + D+ + + +F SPY +I PR ITG C Q V + +
Sbjct: 35 FKRAKKYCRFCAIGQLRIDFIDDLEAIKRFLSPYA-KINPRRITGNCNMHQRHVANALKR 93
Query: 384 AQDLAYMPY 410
A+ LA +P+
Sbjct: 94 ARYLALVPF 102
>UniRef50_A6BM60 Cluster: Chloroplast 30S ribosomal protein S18;
n=1; Gnetum parvifolium|Rep: Chloroplast 30S ribosomal
protein S18 - Gnetum parvifolium
Length = 98
Score = 35.1 bits (77), Expect = 1.0
Identities = 24/82 (29%), Positives = 40/82 (48%)
Frame = +3
Query: 180 PDAPVEMENPFKKELKQXILCKLNIDPDYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQM 359
P+AP K+ K+ I K +YKN L++ F S +I R +T L ++Q
Sbjct: 13 PEAPSGSRKRPLKKFKKPIRIKSEDQINYKNVSLINGFIS-QRAKILSRKVTKLTWKQQR 71
Query: 360 QVEQEITKAQDLAYMPYTYKHK 425
+ I +A+ L+ +P+ K K
Sbjct: 72 LMSVAIKRARILSLLPFIVKTK 93
>UniRef50_O74365 Cluster: SWI/SNF complex subunit Sol1; n=1;
Schizosaccharomyces pombe|Rep: SWI/SNF complex subunit
Sol1 - Schizosaccharomyces pombe (Fission yeast)
Length = 865
Score = 35.1 bits (77), Expect = 1.0
Identities = 24/84 (28%), Positives = 39/84 (46%)
Frame = +3
Query: 144 TIRTQSTNLKPDPDAPVEMENPFKKELKQXILCKLNIDPDYKNYRLLSQFQSPYTGRIYP 323
T++T S+ D PV + P KK + + LN+ Y+ L + Q P +
Sbjct: 369 TVQTSSSAAPVDSAEPVAYQ-PIKKPIDPMLGYPLNVAATYRLDESLLRLQMPSIVDLGT 427
Query: 324 RHITGLCKRKQMQVEQEITKAQDL 395
+I LC Q +E+EIT A ++
Sbjct: 428 VNIQALCMSLQSTLEKEITYAMNV 451
>UniRef50_A7EI68 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 218
Score = 35.1 bits (77), Expect = 1.0
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +3
Query: 264 YKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYKHKIFLKDP 443
YKN+ ++S++ +P GRI TGL Q ++ + I ++ + MP ++H L
Sbjct: 144 YKNFSIMSEYVTPM-GRIRGSKETGLRPVNQRKIAKAIRRSIGMGMMPSVHRHPEVLYKA 202
Query: 444 KLFDPEN 464
+ D +N
Sbjct: 203 REKDEQN 209
>UniRef50_Q74M26 Cluster: 30S ribosomal protein S18; n=126;
Bacteria|Rep: 30S ribosomal protein S18 - Lactobacillus
johnsonii
Length = 78
Score = 35.1 bits (77), Expect = 1.0
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPY 410
DYK+ LL +F S G+I PR +TG + Q ++ I +A+ + +P+
Sbjct: 26 DYKDVDLLKRFISE-RGKILPRRVTGTSAKNQRKLTVAIKRARVMGLLPF 74
>UniRef50_Q0CHW2 Cluster: Putative uncharacterized protein; n=1;
Aspergillus terreus NIH2624|Rep: Putative
uncharacterized protein - Aspergillus terreus (strain
NIH 2624)
Length = 642
Score = 34.7 bits (76), Expect = 1.4
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 255 DPDYKNYRLLSQFQSPYTGRIYPRHITGL---CKRKQMQVEQEITKAQDLAYMPYTYKHK 425
D + +N+RL ++ P G RH TGL C RK + V E+ A+D A+ Y Y K
Sbjct: 47 DTETENWRLAHKYLPPSMGPKAVRHYTGLMQACARKSLPVFDEL-DARDEAWNVYQYMLK 105
Query: 426 I 428
+
Sbjct: 106 L 106
>UniRef50_A7M919 Cluster: Ribosomal protein S18; n=1; Cuscuta
gronovii|Rep: Ribosomal protein S18 - Cuscuta gronovii
(Common dodder)
Length = 142
Score = 34.3 bits (75), Expect = 1.8
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYT 413
DY+N LL +F S G+I R +T L ++Q + I +A+ L+++P+T
Sbjct: 29 DYQNIDLLRRFISQQ-GKILSRRVTRLTLKQQRLLNLAIKQARILSFLPFT 78
>UniRef50_Q55D72 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 824
Score = 34.3 bits (75), Expect = 1.8
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 4/119 (3%)
Frame = +3
Query: 120 STHQAVLSTIRTQS-TNLKPDPDAPV--EMENPFKKELKQXILCKLNIDPDYKNYRLLSQ 290
ST ++ + S +N+ P PV ++ P KK K + N D N LS
Sbjct: 636 STMNEIVQEVSQGSLSNIDPPIYHPVTGKLFTPKKKNPKCLLCQNPNWQVDPLNTPFLSI 695
Query: 291 FQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYKHKIF-LKDPKLFDPEN 464
+ + G + PRH +G C + Q ++ + I +A+ L ++YK+ F + +P ++ N
Sbjct: 696 YLNK-AGDMLPRHFSGNCLKHQKKIVKTIRQAKSLGI--FSYKNGTFTIYNPNVYSLTN 751
>UniRef50_Q9USL7 Cluster: Mitochondrial ribosomal protein subunit
S18; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S18 - Schizosaccharomyces
pombe (Fission yeast)
Length = 166
Score = 34.3 bits (75), Expect = 1.8
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +3
Query: 264 YKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYK 419
+KN +LS+F + GRI PR TGL + Q + + I +A+ MP YK
Sbjct: 110 WKNPVILSRFVTEL-GRIKPRGDTGLTAKNQRLLSRAIRRARAAGIMPTKYK 160
>UniRef50_Q6CPI8 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome E of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 155
Score = 34.3 bits (75), Expect = 1.8
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +3
Query: 243 KLNIDP-D-YKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTY 416
KL I+P D Y N LS+F + TG+I R +TGL + Q ++ + I + Q + M +
Sbjct: 83 KLKINPLDLYTNPEFLSRFVTS-TGKILHRDVTGLSAKNQRRLTKAIKRCQAIGLMSKVH 141
Query: 417 K 419
K
Sbjct: 142 K 142
>UniRef50_A6SAJ6 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 188
Score = 34.3 bits (75), Expect = 1.8
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +3
Query: 264 YKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYKH 422
YKN+ ++S++ +P GRI TGL Q ++ + I ++ L MP ++H
Sbjct: 114 YKNFSIMSEYVTPM-GRIRGSKETGLRPVNQRKIAKAIRRSIGLGMMPSVHRH 165
>UniRef50_P25459 Cluster: Chloroplast 30S ribosomal protein S18;
n=112; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S18 - Zea mays (Maize)
Length = 170
Score = 34.3 bits (75), Expect = 1.8
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Frame = +3
Query: 201 ENPFKKELKQXILCKLNIDP----DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVE 368
+ PF+K KQ + I P DY+N L+++F S G+I R I L ++Q +
Sbjct: 40 KQPFRKS-KQPFRRRSRIGPGDRIDYRNMSLINRFISEQ-GKILSRRINRLTLKQQRLIT 97
Query: 369 QEITKAQDLAYMPY 410
I +A+ L+++P+
Sbjct: 98 LAIKQARILSFLPF 111
>UniRef50_P56353 Cluster: Chloroplast 30S ribosomal protein S18;
n=1; Chlorella vulgaris|Rep: Chloroplast 30S ribosomal
protein S18 - Chlorella vulgaris (Green alga)
Length = 103
Score = 34.3 bits (75), Expect = 1.8
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPY 410
DYKN +LL +F SP G+I R TGL ++Q + I +A+ +P+
Sbjct: 46 DYKNTQLLVKFISPQ-GKILSRRATGLTAKQQRIMANAIKRARMGGLVPF 94
>UniRef50_Q4N807 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria parva
Length = 378
Score = 33.9 bits (74), Expect = 2.4
Identities = 26/110 (23%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Frame = +3
Query: 102 FARQMXSTHQAVLSTIRTQSTNLKPDPDAP---VEMENPFKKELKQXILCKLNIDP-DYK 269
F + + S + ++ T +++ K + D+ ++ EN + + + ++ N P +
Sbjct: 202 FKQAVNSLSSSGINFGHTDASDNKVNEDSESMYIKNENFWDPDRNKRLILNNNNKPFSFH 261
Query: 270 NYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYK 419
+ +L F S G+I PR I +++Q+Q+ + I A++LA PY K
Sbjct: 262 DLHVLHNFISQ-DGQILPRRINMTTRKQQIQIFKAIKIARNLALFPYNNK 310
>UniRef50_O76894 Cluster: CG14796-PA; n=1; Drosophila
melanogaster|Rep: CG14796-PA - Drosophila melanogaster
(Fruit fly)
Length = 1795
Score = 33.9 bits (74), Expect = 2.4
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -3
Query: 432 KIFYVCKCTAYRLNPEPWLFPAPLASVFFYIDQLYASGRFCPCTEI 295
K++Y C + +PWLF P ++F +++ G CP TEI
Sbjct: 162 KVYYRCD----KNRTQPWLFACPAGTIFSPVERKCLPGDQCPSTEI 203
>UniRef50_Q59KY7 Cluster: Likely mitochondrial ribosomal protein
S18; n=1; Candida albicans|Rep: Likely mitochondrial
ribosomal protein S18 - Candida albicans (Yeast)
Length = 200
Score = 33.9 bits (74), Expect = 2.4
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +3
Query: 243 KLNIDPDYKNYRLLSQFQSPY---TGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYT 413
K IDP KN L+ + S + TG+I PR +TG + Q ++ I A+ L +
Sbjct: 131 KSGIDP--KNLYLMPEILSKFLTSTGQILPRQVTGCNAKNQKRLSMAIEYARSLGLLSSQ 188
Query: 414 YKHKIFL 434
++H ++
Sbjct: 189 HRHARYM 195
>UniRef50_UPI00006CBE01 Cluster: Choline/ethanolamine kinase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
Choline/ethanolamine kinase family protein - Tetrahymena
thermophila SB210
Length = 395
Score = 33.5 bits (73), Expect = 3.2
Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
Frame = +3
Query: 69 TYMKMALFKSFFARQMXSTHQAVLSTIRTQSTNLKPDPDAPVEMENPFKKELKQXILCKL 248
T M+ ++ A+ + H+ LS I + ++K D E PF ++KQ L
Sbjct: 113 TTMRSKTYRRLIAKYLSQFHKIQLSNIPREEPSIKKYLDTRTESFKPFFDKMKQGELFSS 172
Query: 249 NIDPDYKNY-RLLSQFQSPYTGRIYPRHITGLC 344
K + ++S+ + + I P+ T LC
Sbjct: 173 EEKEKLKEFEEIVSEKEVEFLYSILPKSETRLC 205
>UniRef50_Q4A5M9 Cluster: 30S ribosomal protein S18; n=1; Mycoplasma
synoviae 53|Rep: 30S ribosomal protein S18 - Mycoplasma
synoviae (strain 53)
Length = 111
Score = 33.5 bits (73), Expect = 3.2
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPY 410
DYKN L +F + G I P+ TG C + Q +V + +A+ +A +P+
Sbjct: 28 DYKNVEDLKKFVNA-VGSIKPKVATGNCAKHQRKVTLAVKRARLMALLPF 76
>UniRef50_A6DQM1 Cluster: 30S ribosomal protein S18; n=1;
Lentisphaera araneosa HTCC2155|Rep: 30S ribosomal
protein S18 - Lentisphaera araneosa HTCC2155
Length = 78
Score = 33.5 bits (73), Expect = 3.2
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLA 398
D+ + +L +F + GRI PR ITG+ KR Q + I +A+++A
Sbjct: 31 DFTDADVLKKFMTE-GGRILPRRITGVSKRYQAMLASAIKRARNIA 75
>UniRef50_Q248D3 Cluster: ATPase, histidine kinase-, DNA gyrase B-,
and HSP90-like domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: ATPase, histidine
kinase-, DNA gyrase B-, and HSP90-like domain containing
protein - Tetrahymena thermophila SB210
Length = 1100
Score = 33.5 bits (73), Expect = 3.2
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +3
Query: 300 PYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYKHKIFLKDPKLFDPENPVRSH 479
PY R++ I G+ R V +E +QD + PY +K+ F ++ + F+P N S+
Sbjct: 731 PYN-RMFAESIPGIGSRISFIVYKEGPPSQDTVFKPYQFKNNNFEQEMEYFNPLNKSASN 789
>UniRef50_A6R1Y9 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 191
Score = 33.5 bits (73), Expect = 3.2
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +3
Query: 264 YKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYKH 422
YKN+ ++S++ + GRI TGL Q ++ + I +A L MP ++H
Sbjct: 122 YKNFAIMSEYVTEM-GRIRHSSETGLRPVNQRKISKAIRRAVSLGLMPSVHRH 173
>UniRef50_Q83IC1 Cluster: 30S ribosomal protein S18; n=3;
Micrococcineae|Rep: 30S ribosomal protein S18 -
Tropheryma whipplei (strain TW08/27) (Whipple's
bacillus)
Length = 83
Score = 33.5 bits (73), Expect = 3.2
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPY 410
DYK+ L +F S G+I R +TG ++Q Q+ + I A+++ +P+
Sbjct: 29 DYKDLASLKRFLSD-RGKIRARRVTGASIQQQRQIAKAIKNAREMGVIPF 77
>UniRef50_Q6KI65 Cluster: 30S ribosomal protein S18; n=9;
Firmicutes|Rep: 30S ribosomal protein S18 - Mycoplasma
mobile
Length = 84
Score = 33.5 bits (73), Expect = 3.2
Identities = 16/50 (32%), Positives = 30/50 (60%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPY 410
DYK+ L+S++ + + G+I ITG C + Q + I +A+ +A +P+
Sbjct: 29 DYKDVELVSKYINNH-GKILSSKITGNCAKHQRLISNVIKRARIMALIPF 77
>UniRef50_Q1KVT1 Cluster: Chloroplast 30S ribosomal protein S18;
n=1; Scenedesmus obliquus|Rep: Chloroplast 30S ribosomal
protein S18 - Scenedesmus obliquus
Length = 188
Score = 33.5 bits (73), Expect = 3.2
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYKHKIFLK 437
DYK+ LL ++ G+I PR T L ++Q V + I A+ + +P+ K + F +
Sbjct: 131 DYKHCGLLQRYIG-LGGKILPRRQTKLTAKQQRYVAKTIKSARIMGLLPFVTKERSFFR 188
>UniRef50_O20032 Cluster: Chloroplast 30S ribosomal protein S18;
n=1; Chlamydomonas reinhardtii|Rep: Chloroplast 30S
ribosomal protein S18 - Chlamydomonas reinhardtii
Length = 137
Score = 33.5 bits (73), Expect = 3.2
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYKHKIFLK 437
DYK+ LL ++ G+I PR T L ++Q V + I A+ + +P+ K + F K
Sbjct: 80 DYKHSGLLQRYIG-LGGKILPRRQTRLTAKQQRFVAKTIKTARVMGLLPFVSKERSFFK 137
>UniRef50_A7AS43 Cluster: Ribosomal protein S18, putative; n=1;
Babesia bovis|Rep: Ribosomal protein S18, putative -
Babesia bovis
Length = 336
Score = 33.1 bits (72), Expect = 4.2
Identities = 19/74 (25%), Positives = 39/74 (52%)
Frame = +3
Query: 264 YKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYKHKIFLKDP 443
+++ +L F + G+I PR +T +++Q Q+ + I A+ +A PY +K + + P
Sbjct: 211 FRDLHVLHNFVAE-NGQILPRRLTYATRQQQRQIFRAIRVARQMALFPYDWKPRYRDRIP 269
Query: 444 KLFDPENPVRSHRF 485
L +P+ + F
Sbjct: 270 -LMNPQQYLADELF 282
>UniRef50_A3LXC6 Cluster: Predicted protein; n=1; Pichia
stipitis|Rep: Predicted protein - Pichia stipitis
(Yeast)
Length = 187
Score = 33.1 bits (72), Expect = 4.2
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +3
Query: 279 LLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYKHKIFLKDPKL 449
+LS+F + TG+I PR ITG + Q + I A+ + T+KH +L L
Sbjct: 132 ILSRFLTS-TGQILPRSITGCSAKNQKLLSDAIRTARCCGLLSATHKHSRYLPSRNL 187
>UniRef50_Q06FK5 Cluster: Chloroplast 30S ribosomal protein S18;
n=1; Pelargonium x hortorum|Rep: Chloroplast 30S
ribosomal protein S18 - Pelargonium hortorum (Common
geranium)
Length = 141
Score = 33.1 bits (72), Expect = 4.2
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
Frame = +3
Query: 138 LSTIRTQ--STNLKPDPDAPVEMENPFKKEL----KQXILCKLNIDP----DYKNYRLLS 287
L +RT+ +T P+P AP++ P K K I P DY+N L+
Sbjct: 8 LKWLRTEFIATKKPPEPKAPLQPPLPPSKRKGKPPKSPRRRSSRIKPGDLIDYRNISLIG 67
Query: 288 QFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYKHKIFLKDPKLFDPENP 467
+F S G+I R + + ++Q ++ I +A+ L+ +P+ ++F K+ E+
Sbjct: 68 RFISQQ-GKILSRRVNRVTLKQQRRLTIAIKQARILSSLPFHATDQLFKIKRKIKRREST 126
Query: 468 VRSHR 482
R R
Sbjct: 127 ARKKR 131
>UniRef50_Q9TM39 Cluster: Chloroplast 30S ribosomal protein S18;
n=1; Cyanidium caldarium|Rep: Chloroplast 30S ribosomal
protein S18 - Cyanidium caldarium
Length = 68
Score = 33.1 bits (72), Expect = 4.2
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYKH 422
+YK L+ +F S G+I P+ IT ++K +E+ I +A+ + MP+ K+
Sbjct: 15 NYKTTDLIREFISD-RGKIIPQRITKSTRKKHKLIEKAIKQARLIGLMPFKQKN 67
>UniRef50_A5FFZ4 Cluster: Putative uncharacterized protein
precursor; n=1; Flavobacterium johnsoniae UW101|Rep:
Putative uncharacterized protein precursor -
Flavobacterium johnsoniae UW101
Length = 139
Score = 32.7 bits (71), Expect = 5.6
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +3
Query: 144 TIRTQSTNLKPDPDAPVEMENPFKKELKQXILCKLNIDPDYKNYRLLSQFQSPYTGRIY 320
T+ TN D ++ + F + KL I+PD N +LL Q++SP TG++Y
Sbjct: 47 TVNKTITNFYADGTI-IDSQQEFDLSGSKFTSYKLGIEPD--NKKLLFQYESPETGKVY 102
>UniRef50_UPI0000519D81 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S18A CG31450-PA isoform 2; n=2;
Apocrita|Rep: PREDICTED: similar to mitochondrial
ribosomal protein S18A CG31450-PA isoform 2 - Apis
mellifera
Length = 158
Score = 32.3 bits (70), Expect = 7.3
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +3
Query: 237 LCKLNIDPDYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQ 389
+C ++ + + +L+QF G I PR ITGLC+ +Q ++ I AQ
Sbjct: 69 ICSSGLNIKHTDVLILNQFVRS-DGCILPRRITGLCEIQQKRISSLIQMAQ 118
>UniRef50_Q8D8D1 Cluster: Saccharopine dehydrogenase; n=38;
Gammaproteobacteria|Rep: Saccharopine dehydrogenase -
Vibrio vulnificus
Length = 414
Score = 32.3 bits (70), Expect = 7.3
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 251 YRSRLQELQIIIAISISVHGQNLPEAYN--WSM*KKTDASGAGNNQGSGF 394
Y++++ L +A+ + GQ +PEAY+ W K + +G G+GF
Sbjct: 101 YQAKVSYLDTSVAVDLCSEGQQVPEAYDEQWKYRAKFEEAGITGILGAGF 150
>UniRef50_Q30QQ5 Cluster: Putative uncharacterized protein; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: Putative
uncharacterized protein - Thiomicrospira denitrificans
(strain ATCC 33889 / DSM 1351)
Length = 255
Score = 32.3 bits (70), Expect = 7.3
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +3
Query: 138 LSTIRTQSTNLKPDPDAPV--EMENPFKKELKQXILCKLNIDPDYKNYRLLSQFQSPYTG 311
L + QSTN+K DAP+ E+E P KE +Q K + P K + + F +T
Sbjct: 51 LDMVNVQSTNVKKAVDAPIVKEIEKPVVKEEEQE---KTEMTPQKKEINIDNLFSQIWTK 107
Query: 312 RIYPRHITGLCKRKQMQVEQEITK 383
I + + K +V QE++K
Sbjct: 108 DI-KKEDKKIEKEIDKRVMQELSK 130
>UniRef50_A6YGA0 Cluster: Chloroplast 30S ribosomal protein S18;
n=1; Leptosira terrestris|Rep: Chloroplast 30S ribosomal
protein S18 - Leptosira terrestris (Pleurastrum
terrestre)
Length = 100
Score = 32.3 bits (70), Expect = 7.3
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPYTYKHK 425
DYKN LL + G+I+PR T L ++Q + + I A+ + +P+ K K
Sbjct: 47 DYKNVILLRNGITA-EGKIFPRRFTKLNAKQQRYMSKAIKNARMVGLLPFVKKSK 100
>UniRef50_A0BWB0 Cluster: Chromosome undetermined scaffold_131,
whole genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_131,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 103
Score = 32.3 bits (70), Expect = 7.3
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 96 SFFARQMXSTHQAVLSTIRTQSTNLKPDPDAPVEMENPFKKE 221
S A+ + T + VL T S N+ PD D M++PF+KE
Sbjct: 2 SISAQPITITSEKVLKTQGDSSENVLPDSDQEDNMQSPFQKE 43
>UniRef50_Q9PPT8 Cluster: 30S ribosomal protein S18; n=72;
Bacteria|Rep: 30S ribosomal protein S18 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 79
Score = 32.3 bits (70), Expect = 7.3
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPY 410
DYK+ LL +F + +I R +TG R Q ++ I +A+ + +PY
Sbjct: 28 DYKDVELLQRFINN-NNKIASRRVTGASARMQRRIANAIKRARFVGLLPY 76
>UniRef50_A0Q4A6 Cluster: D-alanine-D-alanine ligase B; n=7;
Francisella tularensis|Rep: D-alanine-D-alanine ligase B
- Francisella tularensis subsp. novicida (strain U112)
Length = 296
Score = 31.9 bits (69), Expect = 9.7
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +3
Query: 291 FQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDL 395
++S Y+G+ +GLC++K+++V Q KA DL
Sbjct: 203 YESKYSGKSIYHSPSGLCEQKELEVRQLAKKAYDL 237
>UniRef50_P40033 Cluster: 37S ribosomal protein RSM18, mitochondrial
precursor; n=2; Saccharomyces cerevisiae|Rep: 37S
ribosomal protein RSM18, mitochondrial precursor -
Saccharomyces cerevisiae (Baker's yeast)
Length = 202
Score = 31.9 bits (69), Expect = 9.7
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +3
Query: 264 YKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYM 404
Y R+LS++ + TGRI R ITGL + Q ++ + I + Q + M
Sbjct: 157 YARPRILSRYVTS-TGRIQHRDITGLSAKNQRRLSKAIRRCQAIGLM 202
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 502,554,010
Number of Sequences: 1657284
Number of extensions: 9950488
Number of successful extensions: 25991
Number of sequences better than 10.0: 126
Number of HSP's better than 10.0 without gapping: 25199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25963
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34572633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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