Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV1b22f
(539 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC005186-1|AAH05186.1| 142|Homo sapiens mitochondrial ribosomal... 109 5e-24
AF151892-1|AAD34129.1| 142|Homo sapiens CGI-134 protein protein. 109 5e-24
BC010364-1|AAH10364.1| 196|Homo sapiens mitochondrial ribosomal... 41 0.003
AL136131-6|CAC19510.1| 196|Homo sapiens mitochondrial ribosomal... 41 0.003
AK001410-1|BAA91675.1| 196|Homo sapiens protein ( Homo sapiens ... 41 0.003
AB049952-1|BAB41005.1| 196|Homo sapiens mitochondrial ribosomal... 41 0.003
BX248507-3|CAI18569.1| 258|Homo sapiens mitochondrial ribosomal... 40 0.004
BX119957-6|CAM25911.1| 258|Homo sapiens mitochondrial ribosomal... 40 0.004
BC005373-1|AAH05373.1| 258|Homo sapiens mitochondrial ribosomal... 40 0.004
AL845353-9|CAI41878.1| 258|Homo sapiens mitochondrial ribosomal... 40 0.004
AL732442-19|CAI17765.1| 258|Homo sapiens mitochondrial ribosoma... 40 0.004
AL662825-11|CAI17840.1| 258|Homo sapiens mitochondrial ribosoma... 40 0.004
AL662800-10|CAI18162.2| 258|Homo sapiens mitochondrial ribosoma... 40 0.004
AF100761-1|AAD43025.1| 258|Homo sapiens PTD017 protein. 40 0.004
AB202094-2|BAE78614.1| 258|Homo sapiens mitochondrial ribosomal... 40 0.004
AB110934-1|BAD13700.1| 258|Homo sapiens MRPS18B protein protein. 40 0.004
AB110933-1|BAD13699.1| 258|Homo sapiens MRPS18B protein protein. 40 0.004
AL136131-5|CAI19963.2| 264|Homo sapiens mitochondrial ribosomal... 40 0.006
AL136131-7|CAI19964.1| 127|Homo sapiens mitochondrial ribosomal... 39 0.013
AF399708-1|AAO38813.1| 2145|Homo sapiens TRALPUSH protein. 30 6.0
AB046855-1|BAB13461.1| 1435|Homo sapiens KIAA1635 protein protein. 30 6.0
>BC005186-1|AAH05186.1| 142|Homo sapiens mitochondrial ribosomal
protein S18C protein.
Length = 142
Score = 109 bits (263), Expect = 5e-24
Identities = 50/97 (51%), Positives = 69/97 (71%)
Frame = +3
Query: 159 STNLKPDPDAPVEMENPFKKELKQXILCKLNIDPDYKNYRLLSQFQSPYTGRIYPRHITG 338
S + + D P+ MENP+K+ LK+ ILC ++D YKN +LLSQF SP+TG IY RHITG
Sbjct: 41 SQQVSSNEDLPISMENPYKEPLKKCILCGKHVD--YKNVQLLSQFVSPFTGCIYGRHITG 98
Query: 339 LCKRKQMQVEQEITKAQDLAYMPYTYKHKIFLKDPKL 449
LC +KQ ++ + I +AQ + +MP TYK +LKDPK+
Sbjct: 99 LCGKKQKEITKAIKRAQIMGFMPVTYKDPAYLKDPKV 135
>AF151892-1|AAD34129.1| 142|Homo sapiens CGI-134 protein protein.
Length = 142
Score = 109 bits (263), Expect = 5e-24
Identities = 50/97 (51%), Positives = 69/97 (71%)
Frame = +3
Query: 159 STNLKPDPDAPVEMENPFKKELKQXILCKLNIDPDYKNYRLLSQFQSPYTGRIYPRHITG 338
S + + D P+ MENP+K+ LK+ ILC ++D YKN +LLSQF SP+TG IY RHITG
Sbjct: 41 SQQVSSNEDLPISMENPYKEPLKKCILCGKHVD--YKNVQLLSQFVSPFTGCIYGRHITG 98
Query: 339 LCKRKQMQVEQEITKAQDLAYMPYTYKHKIFLKDPKL 449
LC +KQ ++ + I +AQ + +MP TYK +LKDPK+
Sbjct: 99 LCGKKQKEITKAIKRAQIMGFMPVTYKDPAYLKDPKV 135
>BC010364-1|AAH10364.1| 196|Homo sapiens mitochondrial ribosomal
protein S18A protein.
Length = 196
Score = 40.7 bits (91), Expect = 0.003
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +3
Query: 189 PVEMENPFKKELKQXILCKLNIDP--DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQ 362
P E NP Q +C+ N+ +Y + LLSQF P+ G + PR ITGLC+ + +
Sbjct: 57 PKESPNP-PNPSGQCPICRWNLKHKYNYDDVLLLSQFIRPHGGML-PRKITGLCQEEHRK 114
Query: 363 VEQEITKAQDLAYMP 407
+E+ + A +P
Sbjct: 115 IEECVKMAHRAGLLP 129
>AL136131-6|CAC19510.1| 196|Homo sapiens mitochondrial ribosomal
protein S18A protein.
Length = 196
Score = 40.7 bits (91), Expect = 0.003
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +3
Query: 189 PVEMENPFKKELKQXILCKLNIDP--DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQ 362
P E NP Q +C+ N+ +Y + LLSQF P+ G + PR ITGLC+ + +
Sbjct: 57 PKESPNP-PNPSGQCPICRWNLKHKYNYDDVLLLSQFIRPHGGML-PRKITGLCQEEHRK 114
Query: 363 VEQEITKAQDLAYMP 407
+E+ + A +P
Sbjct: 115 IEECVKMAHRAGLLP 129
>AK001410-1|BAA91675.1| 196|Homo sapiens protein ( Homo sapiens
cDNA FLJ10548 fis, clone NT2RP2001969. ).
Length = 196
Score = 40.7 bits (91), Expect = 0.003
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +3
Query: 189 PVEMENPFKKELKQXILCKLNIDP--DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQ 362
P E NP Q +C+ N+ +Y + LLSQF P+ G + PR ITGLC+ + +
Sbjct: 57 PKESPNP-PNPSGQCPICRWNLKHKYNYDDVLLLSQFIRPHGGML-PRKITGLCQEEHRK 114
Query: 363 VEQEITKAQDLAYMP 407
+E+ + A +P
Sbjct: 115 IEECVKMAHRAGLLP 129
>AB049952-1|BAB41005.1| 196|Homo sapiens mitochondrial ribosomal
protein S18a protein.
Length = 196
Score = 40.7 bits (91), Expect = 0.003
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +3
Query: 189 PVEMENPFKKELKQXILCKLNIDP--DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQ 362
P E NP Q +C+ N+ +Y + LLSQF P+ G + PR ITGLC+ + +
Sbjct: 57 PKESPNP-PNPSGQCPICRWNLKHKYNYDDVLLLSQFIRPHGGML-PRKITGLCQEEHRK 114
Query: 363 VEQEITKAQDLAYMP 407
+E+ + A +P
Sbjct: 115 IEECVKMAHRAGLLP 129
>BX248507-3|CAI18569.1| 258|Homo sapiens mitochondrial ribosomal
protein S18B protein.
Length = 258
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPY 410
D++N +LL QF +TG I+ TG+C ++ ++ Q I KA+D + Y
Sbjct: 116 DFRNVKLLEQFVCAHTGIIFYAPYTGVCVKQHKRLTQAIQKARDHGLLIY 165
>BX119957-6|CAM25911.1| 258|Homo sapiens mitochondrial ribosomal
protein S18B protein.
Length = 258
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPY 410
D++N +LL QF +TG I+ TG+C ++ ++ Q I KA+D + Y
Sbjct: 116 DFRNVKLLEQFVCAHTGIIFYAPYTGVCVKQHKRLTQAIQKARDHGLLIY 165
>BC005373-1|AAH05373.1| 258|Homo sapiens mitochondrial ribosomal
protein S18B protein.
Length = 258
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPY 410
D++N +LL QF +TG I+ TG+C ++ ++ Q I KA+D + Y
Sbjct: 116 DFRNVKLLEQFVCAHTGIIFYAPYTGVCVKQHKRLTQAIQKARDHGLLIY 165
>AL845353-9|CAI41878.1| 258|Homo sapiens mitochondrial ribosomal
protein S18B protein.
Length = 258
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPY 410
D++N +LL QF +TG I+ TG+C ++ ++ Q I KA+D + Y
Sbjct: 116 DFRNVKLLEQFVCAHTGIIFYAPYTGVCVKQHKRLTQAIQKARDHGLLIY 165
>AL732442-19|CAI17765.1| 258|Homo sapiens mitochondrial ribosomal
protein S18B protein.
Length = 258
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPY 410
D++N +LL QF +TG I+ TG+C ++ ++ Q I KA+D + Y
Sbjct: 116 DFRNVKLLEQFVCAHTGIIFYAPYTGVCVKQHKRLTQAIQKARDHGLLIY 165
>AL662825-11|CAI17840.1| 258|Homo sapiens mitochondrial ribosomal
protein S18B protein.
Length = 258
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPY 410
D++N +LL QF +TG I+ TG+C ++ ++ Q I KA+D + Y
Sbjct: 116 DFRNVKLLEQFVCAHTGIIFYAPYTGVCVKQHKRLTQAIQKARDHGLLIY 165
>AL662800-10|CAI18162.2| 258|Homo sapiens mitochondrial ribosomal
protein S18B protein.
Length = 258
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPY 410
D++N +LL QF +TG I+ TG+C ++ ++ Q I KA+D + Y
Sbjct: 116 DFRNVKLLEQFVCAHTGIIFYAPYTGVCVKQHKRLTQAIQKARDHGLLIY 165
>AF100761-1|AAD43025.1| 258|Homo sapiens PTD017 protein.
Length = 258
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPY 410
D++N +LL QF +TG I+ TG+C ++ ++ Q I KA+D + Y
Sbjct: 116 DFRNVKLLEQFVCAHTGIIFYAPYTGVCVKQHKRLTQAIQKARDHGLLIY 165
>AB202094-2|BAE78614.1| 258|Homo sapiens mitochondrial ribosomal
protein S18B protein.
Length = 258
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPY 410
D++N +LL QF +TG I+ TG+C ++ ++ Q I KA+D + Y
Sbjct: 116 DFRNVKLLEQFVCAHTGIIFYAPYTGVCVKQHKRLTQAIQKARDHGLLIY 165
>AB110934-1|BAD13700.1| 258|Homo sapiens MRPS18B protein protein.
Length = 258
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPY 410
D++N +LL QF +TG I+ TG+C ++ ++ Q I KA+D + Y
Sbjct: 116 DFRNVKLLEQFVCAHTGIIFYAPYTGVCVKQHKRLTQAIQKARDHGLLIY 165
>AB110933-1|BAD13699.1| 258|Homo sapiens MRPS18B protein protein.
Length = 258
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +3
Query: 261 DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDLAYMPY 410
D++N +LL QF +TG I+ TG+C ++ ++ Q I KA+D + Y
Sbjct: 116 DFRNVKLLEQFVCAHTGIIFYAPYTGVCVKQHKRLTQAIQKARDHGLLIY 165
>AL136131-5|CAI19963.2| 264|Homo sapiens mitochondrial ribosomal
protein S18A protein.
Length = 264
Score = 39.9 bits (89), Expect = 0.006
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +3
Query: 189 PVEMENPFKKELKQXILCKLNIDP--DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQ 362
P E NP Q +C+ N+ +Y + LLSQF P+ G + PR ITGLC+ + +
Sbjct: 57 PKESPNP-PNPSGQCPICRWNLKHKYNYDDVLLLSQFIRPHGGML-PRKITGLCQEEHRK 114
Query: 363 VEQEITKAQDLAYMPY 410
+E+ + A P+
Sbjct: 115 IEECVKMAHRAGRRPW 130
>AL136131-7|CAI19964.1| 127|Homo sapiens mitochondrial ribosomal
protein S18A protein.
Length = 127
Score = 38.7 bits (86), Expect = 0.013
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +3
Query: 189 PVEMENPFKKELKQXILCKLNIDP--DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQ 362
P E NP Q +C+ N+ +Y + LLSQF P+ G + PR ITGLC+ + +
Sbjct: 57 PKESPNP-PNPSGQCPICRWNLKHKYNYDDVLLLSQFIRPHGGML-PRKITGLCQEEHRK 114
Query: 363 VEQEITKA 386
+E+ + A
Sbjct: 115 IEECVKMA 122
>AF399708-1|AAO38813.1| 2145|Homo sapiens TRALPUSH protein.
Length = 2145
Score = 29.9 bits (64), Expect = 6.0
Identities = 19/88 (21%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +3
Query: 18 CXSQ*ICLHVCIF-LSINTYMKMALFKSFFARQMXSTHQAVLSTIRTQSTNLKPDPDAPV 194
C S C+ ++ L ++ + F F+ Q + + + ++NL+ DPD +
Sbjct: 921 CSSPERCILAYLYDLYVSCSHLRSKFGDLFSSACSKVKQTIYNNVMPANSNLRWDPDFMM 980
Query: 195 E-MENPFKKELKQXILCKLNIDPDYKNY 275
+ +ENP + + +L K+ D Y
Sbjct: 981 DFIENPSARSINYSMLGKILSDNAANRY 1008
>AB046855-1|BAB13461.1| 1435|Homo sapiens KIAA1635 protein protein.
Length = 1435
Score = 29.9 bits (64), Expect = 6.0
Identities = 19/88 (21%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +3
Query: 18 CXSQ*ICLHVCIF-LSINTYMKMALFKSFFARQMXSTHQAVLSTIRTQSTNLKPDPDAPV 194
C S C+ ++ L ++ + F F+ Q + + + ++NL+ DPD +
Sbjct: 211 CSSPERCILAYLYDLYVSCSHLRSKFGDLFSSACSKVKQTIYNNVMPANSNLRWDPDFMM 270
Query: 195 E-MENPFKKELKQXILCKLNIDPDYKNY 275
+ +ENP + + +L K+ D Y
Sbjct: 271 DFIENPSARSINYSMLGKILSDNAANRY 298
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,224,824
Number of Sequences: 237096
Number of extensions: 1517308
Number of successful extensions: 3186
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3184
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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