Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV1b03r
         (662 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC110893-1|AAI10894.1|  480|Homo sapiens C19orf55 protein protein.     32   2.1  
AK124208-1|BAC85806.1|  150|Homo sapiens protein ( Homo sapiens ...    31   2.8  
AK055219-1|BAB70878.1|  324|Homo sapiens protein ( Homo sapiens ...    31   2.8  
BC009073-1|AAH09073.1|  292|Homo sapiens C14orf152 protein protein.    30   8.5  
AK093387-1|BAC04151.1|  354|Homo sapiens protein ( Homo sapiens ...    30   8.5  

>BC110893-1|AAI10894.1|  480|Homo sapiens C19orf55 protein protein.
          Length = 480

 Score = 31.9 bits (69), Expect = 2.1
 Identities = 17/57 (29%), Positives = 27/57 (47%)
 Frame = +3

Query: 471 ATQQPVLGTNKPDAQIRSATGFNICTTSRHHGYSSEREHNTELHLVNKNWLEALTLS 641
           ++Q    G NKP+ +  +A    +  TS  H  +  +E    LH  N + L+  TLS
Sbjct: 141 SSQSAAAGANKPEGRPHTAVPTAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETLS 197


>AK124208-1|BAC85806.1|  150|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42214 fis, clone THYMU2037208. ).
          Length = 150

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +3

Query: 288 RCVSELKTHKLEAYAAPGNLDSW-RL*SHLRSPDCVNTGAGGCKE 419
           R +S LK  KL   A+ G+   W +L   LR  +C+N G GGC E
Sbjct: 63  RSLSLLKIQKL---ASRGSACLWSQLLGSLRQENCLNLGGGGCSE 104


>AK055219-1|BAB70878.1|  324|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30657 fis, clone DFNES2000335. ).
          Length = 324

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 17/56 (30%), Positives = 26/56 (46%)
 Frame = +3

Query: 474 TQQPVLGTNKPDAQIRSATGFNICTTSRHHGYSSEREHNTELHLVNKNWLEALTLS 641
           + Q   G NKP+ +  +A    +  TS  H  +  +E    LH  N + L+  TLS
Sbjct: 141 SSQSAAGANKPEGRPHTAVPTAVNVTSASHAVAPLQEIKQNLHTWNSSLLDLETLS 196


>BC009073-1|AAH09073.1|  292|Homo sapiens C14orf152 protein protein.
          Length = 292

 Score = 29.9 bits (64), Expect = 8.5
 Identities = 21/70 (30%), Positives = 27/70 (38%)
 Frame = +3

Query: 273 SESSARCVSELKTHKLEAYAAPGNLDSWRL*SHLRSPDCVNTGAGGCKETIKVKPRRVGC 452
           S+  +R    L     E Y   G+ D  R       PD    G GGCKE +   P R  C
Sbjct: 49  SQKYSRLPRGLPGRAAEPYLKRGSEDRPRRLLLDLGPDSSPGGGGGCKEKVLRNPYREEC 108

Query: 453 HTRESRATQQ 482
             +E    +Q
Sbjct: 109 LAKEQLPQRQ 118


>AK093387-1|BAC04151.1|  354|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36068 fis, clone TESTI2019352. ).
          Length = 354

 Score = 29.9 bits (64), Expect = 8.5
 Identities = 21/70 (30%), Positives = 27/70 (38%)
 Frame = +3

Query: 273 SESSARCVSELKTHKLEAYAAPGNLDSWRL*SHLRSPDCVNTGAGGCKETIKVKPRRVGC 452
           S+  +R    L     E Y   G+ D  R       PD    G GGCKE +   P R  C
Sbjct: 111 SQKYSRLPRGLPGRAAEPYLKRGSEDRPRRLLLDLGPDSSPGGGGGCKEKVLRSPYREEC 170

Query: 453 HTRESRATQQ 482
             +E    +Q
Sbjct: 171 LAKEQLPQRQ 180


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,881,613
Number of Sequences: 237096
Number of extensions: 1911569
Number of successful extensions: 6855
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6855
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)