Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV1b03f
         (701 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY187040-1|AAO39754.1|  211|Anopheles gambiae putative antennal ...    26   1.3  
AJ438610-5|CAD27477.1|  135|Anopheles gambiae hypothetical prote...    24   4.0  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   7.0  

>AY187040-1|AAO39754.1|  211|Anopheles gambiae putative antennal
           carrier protein A5 protein.
          Length = 211

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 13/46 (28%), Positives = 19/46 (41%)
 Frame = +2

Query: 191 ARDSLVWQPTRRGFTFMVSLHPPAPVLTQSGLRKWDHSLQLSRFPG 328
           AR  L W+        ++   P AP  +   +R W H L +   PG
Sbjct: 74  ARPKLCWEVEPSALYTLLMADPDAPSRSNPEMRSWKHWL-VGNIPG 118


>AJ438610-5|CAD27477.1|  135|Anopheles gambiae hypothetical protein
           protein.
          Length = 135

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +1

Query: 169 PQDRLLRSSRFSRMATDPSW-LHFYGLFAPP-GTRIN 273
           P  RL+ S      AT   +  HFYG F PP G R N
Sbjct: 3   PSSRLVESGCVVFPATPIRFSTHFYGPFVPPVGFRYN 39


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 13/47 (27%), Positives = 18/47 (38%)
 Frame = +2

Query: 185 CVARDSLVWQPTRRGFTFMVSLHPPAPVLTQSGLRKWDHSLQLSRFP 325
           CV     + QP+   FT      P  P L  +     D+ +Q S  P
Sbjct: 780 CVTNGDYMLQPSNAPFTPPTDRTPTPPPLPATAEPMGDYMIQPSNIP 826


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,599
Number of Sequences: 2352
Number of extensions: 12135
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)