Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV1a22r
(811 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 128 5e-30
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 91 9e-19
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 88 6e-18
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 88 6e-18
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 88 6e-18
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 84 1e-16
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 84 1e-16
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 82 5e-16
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 82 5e-16
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 82 5e-16
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 80 2e-15
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 80 2e-15
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 80 2e-15
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 79 5e-15
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 78 6e-15
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 78 6e-15
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 78 6e-15
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 78 9e-15
U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation fact... 78 9e-15
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 78 9e-15
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 78 9e-15
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 72 4e-13
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 70 2e-12
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 70 2e-12
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 69 4e-12
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 69 4e-12
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 67 2e-11
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 66 4e-11
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 65 5e-11
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 65 5e-11
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 65 6e-11
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 62 5e-10
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 62 5e-10
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 60 1e-09
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 60 1e-09
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 60 1e-09
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 59 4e-09
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 57 1e-08
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 57 1e-08
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 57 2e-08
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 54 1e-07
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 54 1e-07
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 54 1e-07
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 53 3e-07
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 52 4e-07
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 52 4e-07
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 47 1e-05
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 44 1e-04
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 42 4e-04
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 41 0.001
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 41 0.001
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 40 0.002
U58757-1|AAD47117.2| 620|Caenorhabditis elegans Dicer related h... 38 0.009
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 38 0.011
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 37 0.020
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 36 0.034
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 36 0.034
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 36 0.045
AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical ... 31 0.98
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 29 3.0
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 29 3.0
Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical pr... 28 6.9
AF016683-8|AAM97998.1| 480|Caenorhabditis elegans Hypothetical ... 28 6.9
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 128 bits (309), Expect = 5e-30
Identities = 61/108 (56%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
Frame = -3
Query: 803 CMAIKLNKKEMKFCISSRK-GRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRI 627
C+ N+ E + + K G+ I++ATDVAARGLDVD IK+VIN+DYPN+SEDY+HRI
Sbjct: 405 CIHGDKNQGERDWVLQEFKAGKTPIMLATDVAARGLDVDDIKFVINYDYPNNSEDYVHRI 464
Query: 626 GRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMADR 483
GRTGRS KGT+Y FFT +N+ +AKDL+ VL EA Q + L+ MA+R
Sbjct: 465 GRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQTVPQALRDMANR 512
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 91.1 bits (216), Expect = 9e-19
Identities = 42/88 (47%), Positives = 61/88 (69%)
Frame = -3
Query: 752 RKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTP 573
R G A ILVAT VAARGLD+ +K+VIN+D P+ ++Y+HRIGRTGR + G + +FF
Sbjct: 474 RTGTAPILVATAVAARGLDIPNVKHVINYDLPSDVDEYVHRIGRTGRVGNVGLATSFFND 533
Query: 572 SNSRQAKDLVSVLQEANQIISPQLQSMA 489
N A++L+ ++ EANQ + L+ M+
Sbjct: 534 KNRNIARELMDLIVEANQELPDWLEGMS 561
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 88.2 bits (209), Expect = 6e-18
Identities = 40/88 (45%), Positives = 59/88 (67%)
Frame = -3
Query: 752 RKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTP 573
R G+ ILVAT VAARGLD+ +++VIN+D P S++Y+HRIGRTGR + G + +FF
Sbjct: 445 RSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFND 504
Query: 572 SNSRQAKDLVSVLQEANQIISPQLQSMA 489
N +DL +++ E+NQ + L +A
Sbjct: 505 KNRGIGRDLKNLIVESNQEVPEWLHQVA 532
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 88.2 bits (209), Expect = 6e-18
Identities = 40/88 (45%), Positives = 59/88 (67%)
Frame = -3
Query: 752 RKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTP 573
R G+ ILVAT VAARGLD+ +++VIN+D P S++Y+HRIGRTGR + G + +FF
Sbjct: 429 RSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFND 488
Query: 572 SNSRQAKDLVSVLQEANQIISPQLQSMA 489
N +DL +++ E+NQ + L +A
Sbjct: 489 KNRGIGRDLKNLIVESNQEVPEWLHQVA 516
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 88.2 bits (209), Expect = 6e-18
Identities = 40/88 (45%), Positives = 59/88 (67%)
Frame = -3
Query: 752 RKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTP 573
R G+ ILVAT VAARGLD+ +++VIN+D P S++Y+HRIGRTGR + G + +FF
Sbjct: 426 RSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFND 485
Query: 572 SNSRQAKDLVSVLQEANQIISPQLQSMA 489
N +DL +++ E+NQ + L +A
Sbjct: 486 KNRGIGRDLKNLIVESNQEVPEWLHQVA 513
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 84.2 bits (199), Expect = 1e-16
Identities = 36/90 (40%), Positives = 61/90 (67%)
Frame = -3
Query: 752 RKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTP 573
R G ILVATD+A+RG+DV I +V+N+D+P E+Y+HR+GRTGR+ KG + +F
Sbjct: 385 RSGEVQILVATDLASRGIDVPDITHVLNYDFPMDIEEYVHRVGRTGRAGRKGEAMSFLWW 444
Query: 572 SNSRQAKDLVSVLQEANQIISPQLQSMADR 483
++ + L+ +L+++ Q + QL+ A++
Sbjct: 445 NDRSNFEGLIQILEKSEQEVPDQLRRDAEK 474
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 83.8 bits (198), Expect = 1e-16
Identities = 42/89 (47%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Frame = -3
Query: 752 RKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTP 573
RK +LVATDVA++GLD GI++VINFD P E+Y+HRIGRTGRS KG + F
Sbjct: 488 RKNEKDVLVATDVASKGLDFQGIEHVINFDMPEDIENYVHRIGRTGRSGRKGLATTFINK 547
Query: 572 SNSRQA-KDLVSVLQEANQIISPQLQSMA 489
+ DL +L EA Q + L+ +A
Sbjct: 548 KSEMSVLSDLKQLLAEAGQELPEFLKMLA 576
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 81.8 bits (193), Expect = 5e-16
Identities = 40/88 (45%), Positives = 57/88 (64%)
Frame = -3
Query: 752 RKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTP 573
R G +L+AT VA RGLD+ G+ +VIN+D P++ +DYIHRIGRTGR + G + +F +
Sbjct: 653 RNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNSGRATSFISE 712
Query: 572 SNSRQAKDLVSVLQEANQIISPQLQSMA 489
S +LV VL +A QI+ +Q A
Sbjct: 713 DCS-LLSELVGVLADAQQIVPDWMQGAA 739
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 81.8 bits (193), Expect = 5e-16
Identities = 40/88 (45%), Positives = 57/88 (64%)
Frame = -3
Query: 752 RKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTP 573
R G +L+AT VA RGLD+ G+ +VIN+D P++ +DYIHRIGRTGR + G + +F +
Sbjct: 653 RNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNSGRATSFISE 712
Query: 572 SNSRQAKDLVSVLQEANQIISPQLQSMA 489
S +LV VL +A QI+ +Q A
Sbjct: 713 DCS-LLSELVGVLADAQQIVPDWMQGAA 739
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 81.8 bits (193), Expect = 5e-16
Identities = 40/88 (45%), Positives = 57/88 (64%)
Frame = -3
Query: 752 RKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTP 573
R G +L+AT VA RGLD+ G+ +VIN+D P++ +DYIHRIGRTGR + G + +F +
Sbjct: 653 RNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNSGRATSFISE 712
Query: 572 SNSRQAKDLVSVLQEANQIISPQLQSMA 489
S +LV VL +A QI+ +Q A
Sbjct: 713 DCS-LLSELVGVLADAQQIVPDWMQGAA 739
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 79.8 bits (188), Expect = 2e-15
Identities = 37/85 (43%), Positives = 57/85 (67%)
Frame = -3
Query: 752 RKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTP 573
R G +L+AT VA RGLD+ G+ +VIN+D P++ +DYIHRIGRTGR + G + +F +
Sbjct: 864 RNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNAGRATSFIS- 922
Query: 572 SNSRQAKDLVSVLQEANQIISPQLQ 498
+ +LV VL +A+Q++ +Q
Sbjct: 923 EDCNLLSELVRVLSDADQLVPEWMQ 947
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 79.8 bits (188), Expect = 2e-15
Identities = 37/85 (43%), Positives = 57/85 (67%)
Frame = -3
Query: 752 RKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTP 573
R G +L+AT VA RGLD+ G+ +VIN+D P++ +DYIHRIGRTGR + G + +F +
Sbjct: 864 RNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNAGRATSFIS- 922
Query: 572 SNSRQAKDLVSVLQEANQIISPQLQ 498
+ +LV VL +A+Q++ +Q
Sbjct: 923 EDCNLLSELVRVLSDADQLVPEWMQ 947
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 79.8 bits (188), Expect = 2e-15
Identities = 37/85 (43%), Positives = 57/85 (67%)
Frame = -3
Query: 752 RKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTP 573
R G +L+AT VA RGLD+ G+ +VIN+D P++ +DYIHRIGRTGR + G + +F +
Sbjct: 864 RNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNAGRATSFIS- 922
Query: 572 SNSRQAKDLVSVLQEANQIISPQLQ 498
+ +LV VL +A+Q++ +Q
Sbjct: 923 EDCNLLSELVRVLSDADQLVPEWMQ 947
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 78.6 bits (185), Expect = 5e-15
Identities = 38/85 (44%), Positives = 52/85 (61%)
Frame = -3
Query: 743 RASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNS 564
++ ILVATDVAARGLD+ I+ VINFD + ++HRIGRTGR+ KGT+Y T +
Sbjct: 560 KSQILVATDVAARGLDISEIRTVINFDMARDIDTHVHRIGRTGRAGHKGTAYTLVTEKDI 619
Query: 563 RQAKDLVSVLQEANQIISPQLQSMA 489
LV L+ +Q + L +A
Sbjct: 620 EMVGHLVKNLESVSQEVPKPLMDLA 644
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 78.2 bits (184), Expect = 6e-15
Identities = 37/76 (48%), Positives = 49/76 (64%)
Frame = -3
Query: 752 RKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTP 573
++G + ILVATDVA RG+DV + V+N+D S EDY HRIGRTGR+ G + F TP
Sbjct: 620 KEGTSDILVATDVAGRGIDVKDVSLVLNYDMAKSIEDYTHRIGRTGRAGKHGKAITFLTP 679
Query: 572 SNSRQAKDLVSVLQEA 525
++ DL VL E+
Sbjct: 680 DDTAVYFDLKQVLVES 695
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 78.2 bits (184), Expect = 6e-15
Identities = 37/89 (41%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Frame = -3
Query: 752 RKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTP 573
R G +L+AT V RGLD+ G+ +VIN+D PN+ +DYIHRIGRTGR + G + +F +
Sbjct: 610 RSGAKPVLIATAVVERGLDIKGVDHVINYDMPNNIDDYIHRIGRTGRVGNSGRATSFISL 669
Query: 572 SNSRQ-AKDLVSVLQEANQIISPQLQSMA 489
++ Q LV L +A Q++ ++ A
Sbjct: 670 ADDVQILPQLVRTLADAEQVVPSWMKEAA 698
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 78.2 bits (184), Expect = 6e-15
Identities = 37/89 (41%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Frame = -3
Query: 752 RKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTP 573
R G +L+AT V RGLD+ G+ +VIN+D PN+ +DYIHRIGRTGR + G + +F +
Sbjct: 610 RSGAKPVLIATAVVERGLDIKGVDHVINYDMPNNIDDYIHRIGRTGRVGNSGRATSFISL 669
Query: 572 SNSRQ-AKDLVSVLQEANQIISPQLQSMA 489
++ Q LV L +A Q++ ++ A
Sbjct: 670 ADDVQILPQLVRTLADAEQVVPSWMKEAA 698
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 77.8 bits (183), Expect = 9e-15
Identities = 33/71 (46%), Positives = 50/71 (70%)
Frame = -3
Query: 752 RKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTP 573
R G + +L+ TD+ ARG+DV + VIN+D P++ E+YIHRIGR+GR KG + F T
Sbjct: 315 RSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTE 374
Query: 572 SNSRQAKDLVS 540
+++RQ K++ S
Sbjct: 375 NDARQLKEIES 385
>U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation factor
protein 1, isoformb protein.
Length = 115
Score = 77.8 bits (183), Expect = 9e-15
Identities = 33/71 (46%), Positives = 50/71 (70%)
Frame = -3
Query: 752 RKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTP 573
R G + +L+ TD+ ARG+DV + VIN+D P++ E+YIHRIGR+GR KG + F T
Sbjct: 28 RSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTE 87
Query: 572 SNSRQAKDLVS 540
+++RQ K++ S
Sbjct: 88 NDARQLKEIES 98
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 77.8 bits (183), Expect = 9e-15
Identities = 33/71 (46%), Positives = 50/71 (70%)
Frame = -3
Query: 752 RKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTP 573
R G + +L+ TD+ ARG+DV + VIN+D P++ E+YIHRIGR+GR KG + F T
Sbjct: 315 RSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTE 374
Query: 572 SNSRQAKDLVS 540
+++RQ K++ S
Sbjct: 375 NDARQLKEIES 385
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 77.8 bits (183), Expect = 9e-15
Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Frame = -3
Query: 752 RKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTP 573
+ G +LVAT VAARGLDV + V+N+D PN EDY+HR+GRTGR+ KG +Y F P
Sbjct: 599 KTGVIKVLVATSVAARGLDVKNLILVVNYDCPNHYEDYVHRVGRTGRAGRKGYAYTFVLP 658
Query: 572 SN-SRQAKDLVSVLQEANQIISPQLQSMADR 483
+ + A ++ + A L++M +R
Sbjct: 659 EHQEKMAGEICRAFETAGCKPPADLKAMFER 689
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 72.1 bits (169), Expect = 4e-13
Identities = 31/87 (35%), Positives = 52/87 (59%)
Frame = -3
Query: 752 RKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTP 573
R+G +LV T++ RGLD+ + VIN+D P S YIHR+GRTGR+ G + +FT
Sbjct: 422 RRGEIWVLVCTELLGRGLDLSDVGLVINYDLPTSIVSYIHRVGRTGRAGKSGHAVTYFTD 481
Query: 572 SNSRQAKDLVSVLQEANQIISPQLQSM 492
++ + K + +V++++ + L M
Sbjct: 482 ADMKYIKSIATVIRQSGFDVPEYLMEM 508
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 70.1 bits (164), Expect = 2e-12
Identities = 38/87 (43%), Positives = 51/87 (58%)
Frame = -3
Query: 752 RKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTP 573
R G +L++TDV ARGLDV + VIN+D PN+ E YIHRIGR+GR KG + F
Sbjct: 312 RAGTTRVLISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFV-- 369
Query: 572 SNSRQAKDLVSVLQEANQIISPQLQSM 492
+D V +L++ Q S Q+ M
Sbjct: 370 -----KQDDVRILRDIEQYYSTQIDEM 391
Score = 28.7 bits (61), Expect = 5.2
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2
Query: 804 MHGDKTQQERDEVLYQFK 751
MHGD Q++RDEV+ +F+
Sbjct: 295 MHGDMEQKDRDEVMKEFR 312
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 70.1 bits (164), Expect = 2e-12
Identities = 38/87 (43%), Positives = 51/87 (58%)
Frame = -3
Query: 752 RKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTP 573
R G +L++TDV ARGLDV + VIN+D PN+ E YIHRIGR+GR KG + F
Sbjct: 312 RAGTTRVLISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFV-- 369
Query: 572 SNSRQAKDLVSVLQEANQIISPQLQSM 492
+D V +L++ Q S Q+ M
Sbjct: 370 -----KQDDVRILRDIEQYYSTQIDEM 391
Score = 28.7 bits (61), Expect = 5.2
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2
Query: 804 MHGDKTQQERDEVLYQFK 751
MHGD Q++RDEV+ +F+
Sbjct: 295 MHGDMEQKDRDEVMKEFR 312
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 68.9 bits (161), Expect = 4e-12
Identities = 35/81 (43%), Positives = 53/81 (65%), Gaps = 3/81 (3%)
Frame = -3
Query: 752 RKGRASILVATDVAARGLDVDGIKYVINFDYP--NSSEDYIHRIGRTGRSKSKGTSYAFF 579
R+G+ +VA++V ARGL++ G+ +V+N+D P N ++Y++RIGRTGR+ GTS AF
Sbjct: 1049 RRGKYQCMVASNVCARGLNIAGLDHVVNYDMPDKNGFDEYVNRIGRTGRAGFTGTSTAFV 1108
Query: 578 TPSNSRQ-AKDLVSVLQEANQ 519
N LVS+L EA +
Sbjct: 1109 DVENDTDIIPCLVSILNEAKK 1129
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 68.9 bits (161), Expect = 4e-12
Identities = 35/81 (43%), Positives = 53/81 (65%), Gaps = 3/81 (3%)
Frame = -3
Query: 752 RKGRASILVATDVAARGLDVDGIKYVINFDYP--NSSEDYIHRIGRTGRSKSKGTSYAFF 579
R+G+ +VA++V ARGL++ G+ +V+N+D P N ++Y++RIGRTGR+ GTS AF
Sbjct: 1049 RRGKYQCMVASNVCARGLNIAGLDHVVNYDMPDKNGFDEYVNRIGRTGRAGFTGTSTAFV 1108
Query: 578 TPSNSRQ-AKDLVSVLQEANQ 519
N LVS+L EA +
Sbjct: 1109 DVENDTDIIPCLVSILNEAKK 1129
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 66.9 bits (156), Expect = 2e-11
Identities = 28/71 (39%), Positives = 46/71 (64%)
Frame = -3
Query: 752 RKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTP 573
+K +LV+TD+A+RGLD++G++ VIN + P S + YIHR+GRT R+ G S +
Sbjct: 464 KKAEIDVLVSTDLASRGLDIEGVQTVINMNMPKSIKQYIHRVGRTARAGKAGRSISLVGE 523
Query: 572 SNSRQAKDLVS 540
+ K++V+
Sbjct: 524 DERKLLKEIVN 534
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 65.7 bits (153), Expect = 4e-11
Identities = 30/71 (42%), Positives = 44/71 (61%)
Frame = -3
Query: 782 KKEMKFCISSRKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKS 603
KK ++ + +A++L+ATDVA+RGLD + I +VI D P +DYIHR+GR+ R
Sbjct: 359 KKRIETFTKFDESKAAVLIATDVASRGLDFEHIDWVIQVDCPAQIDDYIHRVGRSARMDD 418
Query: 602 KGTSYAFFTPS 570
G S +PS
Sbjct: 419 SGNSLLMVSPS 429
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 65.3 bits (152), Expect = 5e-11
Identities = 32/77 (41%), Positives = 47/77 (61%)
Frame = -3
Query: 788 LNKKEMKFCISSRKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRS 609
+ K+ +K + + ++L+ATDVAARGLD+ GI +VI++ P E YIHR GRT R+
Sbjct: 308 IQKQRLKNLEKFSESKNAVLLATDVAARGLDIQGIDHVIHYQVPKKVEIYIHRSGRTARA 367
Query: 608 KSKGTSYAFFTPSNSRQ 558
+G + P SRQ
Sbjct: 368 SHRGLTVVLVDPP-SRQ 383
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 65.3 bits (152), Expect = 5e-11
Identities = 32/77 (41%), Positives = 47/77 (61%)
Frame = -3
Query: 788 LNKKEMKFCISSRKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRS 609
+ K+ +K + + ++L+ATDVAARGLD+ GI +VI++ P E YIHR GRT R+
Sbjct: 475 IQKQRLKNLEKFSESKNAVLLATDVAARGLDIQGIDHVIHYQVPKKVEIYIHRSGRTARA 534
Query: 608 KSKGTSYAFFTPSNSRQ 558
+G + P SRQ
Sbjct: 535 SHRGLTVVLVDPP-SRQ 550
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 64.9 bits (151), Expect = 6e-11
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = -3
Query: 734 ILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFT 576
ILV TDVAARGLD+ + VIN+D P+ S+DY+HR+GRT R+ G + T
Sbjct: 336 ILVCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRTARAGRSGIAITVVT 388
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 62.1 bits (144), Expect = 5e-10
Identities = 29/66 (43%), Positives = 41/66 (62%)
Frame = -3
Query: 734 ILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQA 555
ILVATD+ RG+D++ + V N+D P S+ Y+HR+ R GR +KG + F + N A
Sbjct: 336 ILVATDLFGRGMDIERVNIVFNYDMPEDSDSYLHRVARAGRFGTKGLAITFVSDEN--DA 393
Query: 554 KDLVSV 537
K L SV
Sbjct: 394 KTLNSV 399
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 62.1 bits (144), Expect = 5e-10
Identities = 29/66 (43%), Positives = 41/66 (62%)
Frame = -3
Query: 734 ILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQA 555
ILVATD+ RG+D++ + V N+D P S+ Y+HR+ R GR +KG + F + N A
Sbjct: 328 ILVATDLFGRGMDIERVNIVFNYDMPEDSDSYLHRVARAGRFGTKGLAITFVSDEN--DA 385
Query: 554 KDLVSV 537
K L SV
Sbjct: 386 KTLNSV 391
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 60.5 bits (140), Expect = 1e-09
Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Frame = -3
Query: 752 RKGR-ASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFT 576
+KG+ AS L +RG+D + V+NFD+P +++ YIHR+GRT R +KGT+ +F
Sbjct: 354 KKGKKASKLDKESGVSRGIDFHHVSNVVNFDFPETTDAYIHRVGRTARGFNKGTALSFCI 413
Query: 575 PSNSRQAKDLVSVLQEANQ 519
PS + L + +E NQ
Sbjct: 414 PS---ERAHLEQIQEEINQ 429
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 60.5 bits (140), Expect = 1e-09
Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Frame = -3
Query: 752 RKGR-ASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFT 576
+KG+ AS L +RG+D + V+NFD+P +++ YIHR+GRT R +KGT+ +F
Sbjct: 421 KKGKKASKLDKESGVSRGIDFHHVSNVVNFDFPETTDAYIHRVGRTARGFNKGTALSFCI 480
Query: 575 PSNSRQAKDLVSVLQEANQ 519
PS + L + +E NQ
Sbjct: 481 PS---ERAHLEQIQEEINQ 496
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 60.5 bits (140), Expect = 1e-09
Identities = 25/59 (42%), Positives = 37/59 (62%)
Frame = -3
Query: 752 RKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFT 576
R+G LV +D+ RG+D+ + VINFD+P ++E Y+HRIGR+GR G + T
Sbjct: 327 RQGNCRNLVCSDLLTRGIDIQAVNVVINFDFPRNAETYLHRIGRSGRFGHLGVAINLIT 385
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = -3
Query: 752 RKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTS 591
+KG LV +DV ARGLDV G+ +VI+ P+ Y+HRIGR GR++ G S
Sbjct: 552 KKGIIRFLVCSDVVARGLDVQGVPFVISVTLPDEKSMYVHRIGRVGRAERMGLS 605
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/97 (29%), Positives = 52/97 (53%)
Frame = -3
Query: 782 KKEMKFCISSRKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKS 603
K+ + + R +++ TDVA+RGLD+ + V+N + P + YIHR+GR+ R+
Sbjct: 374 KQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARAGR 433
Query: 602 KGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 492
G++ +F T + V +LQ Q+I +L +
Sbjct: 434 FGSALSFVTQYD-------VELLQAVEQVIGKKLDEL 463
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/97 (29%), Positives = 52/97 (53%)
Frame = -3
Query: 782 KKEMKFCISSRKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKS 603
K+ + + R +++ TDVA+RGLD+ + V+N + P + YIHR+GR+ R+
Sbjct: 374 KQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARAGR 433
Query: 602 KGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 492
G++ +F T + V +LQ Q+I +L +
Sbjct: 434 FGSALSFVTQYD-------VELLQAVEQVIGKKLDEL 463
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
Frame = -3
Query: 752 RKGRASILVATDVAARGLDVDGIKYVINFDYPNSSED-----YIHRIGRTGRS--KSKGT 594
+ R ++LV TD+ +RG+DV + VINFD P+ D +IHR GRTGR+ K G
Sbjct: 693 KSNRVNLLVTTDLLSRGIDVSDLDRVINFDLPDGDPDQGADTFIHRAGRTGRTGRKENGL 752
Query: 593 SYAFFTPSNSRQA 555
+F P + R +
Sbjct: 753 CVSFVDPQSDRDS 765
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = -3
Query: 788 LNKKEMKFCISS-RKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGR 612
+++K+ + + R R ILV++D+ ARG+D D + V+N D + E Y HRIGR R
Sbjct: 293 MSQKDRQLAVDQLRAKRVKILVSSDLTARGIDADNVNLVVNIDAAANEETYFHRIGRAAR 352
Query: 611 SKSKGTS 591
+ G +
Sbjct: 353 FGAHGAA 359
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = -3
Query: 788 LNKKEMKFCISS-RKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGR 612
+++K+ + + R R ILV++D+ ARG+D D + V+N D + E Y HRIGR R
Sbjct: 293 MSQKDRQLAVDQLRAKRVKILVSSDLTARGIDADNVNLVVNIDAAANEETYFHRIGRAAR 352
Query: 611 SKSKGTS 591
+ G +
Sbjct: 353 FGAHGAA 359
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Frame = -3
Query: 803 CMAIKLNKKEMKFCISSRK---GRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIH 633
CM+I +K+ K + + IL+ TDVAARGLD+ + +++ +D + +YIH
Sbjct: 341 CMSIHGKQKQQKRTTTFFQFCQAETGILLCTDVAARGLDIPAVDWIVQYDPTDEPREYIH 400
Query: 632 RIGRTGR 612
R+GRT R
Sbjct: 401 RVGRTAR 407
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 52.8 bits (121), Expect = 3e-07
Identities = 21/48 (43%), Positives = 32/48 (66%)
Frame = -3
Query: 734 ILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTS 591
++++TDV ARG+D+ I +VI FD P S ++HR GRT R +G +
Sbjct: 312 VMISTDVMARGIDISDIDWVIQFDLPKHSSWFVHRAGRTARCGREGNA 359
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/68 (36%), Positives = 38/68 (55%)
Frame = -3
Query: 737 SILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQ 558
+ILV TDVAARG+D+ + VIN +P ++ ++HR+GR R+ GT+ +
Sbjct: 317 NILVVTDVAARGVDIPLLDTVINLHFPPKAKLFVHRVGRVARAGRSGTAISLIANDELPY 376
Query: 557 AKDLVSVL 534
DL L
Sbjct: 377 LTDLFMFL 384
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/68 (36%), Positives = 38/68 (55%)
Frame = -3
Query: 737 SILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQ 558
+ILV TDVAARG+D+ + VIN +P ++ ++HR+GR R+ GT+ +
Sbjct: 317 NILVVTDVAARGVDIPLLDTVINLHFPPKAKLFVHRVGRVARAGRSGTAISLIANDELPY 376
Query: 557 AKDLVSVL 534
DL L
Sbjct: 377 LTDLFMFL 384
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/62 (35%), Positives = 35/62 (56%)
Frame = -3
Query: 782 KKEMKFCISSRKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKS 603
K+ K K +L+ +DV ARG D++ + VIN++ P + ++HR GRTGR+
Sbjct: 436 KRRYKMLEKFNKNENRVLICSDVLARGTDLNKVDCVINYNLPADDKLFVHRAGRTGRAGQ 495
Query: 602 KG 597
G
Sbjct: 496 DG 497
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/79 (34%), Positives = 45/79 (56%)
Frame = -3
Query: 782 KKEMKFCISSRKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKS 603
+++M +SR R +LV TD+ ARG+++ +IN+D + E+Y+ R GR G S
Sbjct: 266 REDMVKDFNSRNTR--VLVTTDLMARGMNIRK-SLIINYDVSGNMENYMLRNGRQGNFGS 322
Query: 602 KGTSYAFFTPSNSRQAKDL 546
KG +FFT ++ K +
Sbjct: 323 KGLPISFFTENDISDLKKI 341
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
(werner's syndrome) relatedprotein 1 protein.
Length = 1056
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/79 (26%), Positives = 38/79 (48%)
Frame = -3
Query: 749 KGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPS 570
+ + + +VAT G+D ++ VI++ PN+ E Y IGR GR S F+ P
Sbjct: 494 RDKITTIVATVAFGMGIDKPDVRNVIHYGCPNNIESYYQEIGRAGRDGSPSICRVFWAPK 553
Query: 569 NSRQAKDLVSVLQEANQII 513
+ K + Q+ +++
Sbjct: 554 DLNTIKFKLRNSQQKEEVV 572
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 42.7 bits (96), Expect = 3e-04
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 17/99 (17%)
Frame = -3
Query: 761 ISSRKGRASILVATDVAARGLDVDGIKYVINFDYP-----------------NSSEDYIH 633
I ++G +L+ T+V ARG+DV + VIN+D P E Y+H
Sbjct: 499 IHFKRGDFKVLITTNVFARGIDVAQVSVVINYDLPIKYTDEGTPMVVDGFTQPDCETYLH 558
Query: 632 RIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQI 516
RIGRTGR G + +S + ++++VL+ Q+
Sbjct: 559 RIGRTGRFGKTGIAINLI---DSEDSMNMINVLENHFQM 594
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 42.7 bits (96), Expect = 3e-04
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 17/99 (17%)
Frame = -3
Query: 761 ISSRKGRASILVATDVAARGLDVDGIKYVINFDYP-----------------NSSEDYIH 633
I ++G +L+ T+V ARG+DV + VIN+D P E Y+H
Sbjct: 524 IHFKRGDFKVLITTNVFARGIDVAQVSVVINYDLPIKYTDEGTPMVVDGFTQPDCETYLH 583
Query: 632 RIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQI 516
RIGRTGR G + +S + ++++VL+ Q+
Sbjct: 584 RIGRTGRFGKTGIAINLI---DSEDSMNMINVLENHFQM 619
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 42.7 bits (96), Expect = 3e-04
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 17/99 (17%)
Frame = -3
Query: 761 ISSRKGRASILVATDVAARGLDVDGIKYVINFDYP-----------------NSSEDYIH 633
I ++G +L+ T+V ARG+DV + VIN+D P E Y+H
Sbjct: 908 IHFKRGDFKVLITTNVFARGIDVAQVSVVINYDLPIKYTDEGTPMVVDGFTQPDCETYLH 967
Query: 632 RIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQI 516
RIGRTGR G + +S + ++++VL+ Q+
Sbjct: 968 RIGRTGRFGKTGIAINLI---DSEDSMNMINVLENHFQM 1003
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = -3
Query: 731 LVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTS 591
+V T++ ARG+DV +K+ I + + Y HRIGR GR G S
Sbjct: 430 VVCTNILARGIDVSSVKHTIIMEMSADFDTYKHRIGRVGRDGCGGKS 476
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = -3
Query: 746 GRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFF 579
G+ ++VAT G+D +++VI+ P S E+Y GR GR T ++
Sbjct: 358 GKIQVIVATVAFGMGIDKPNVRFVIHHSLPKSIENYYQESGRAGRDGQPATCILYY 413
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = -3
Query: 746 GRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFF 579
G+ ++VAT G+D +++VI+ P S E+Y GR GR T ++
Sbjct: 381 GKIQVIVATVAFGMGIDKPNVRFVIHHSLPKSIENYYQESGRAGRDGQPATCILYY 436
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -3
Query: 731 LVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKG 597
+V T++ +RG+DV +K I + Y+HRIGR GR G
Sbjct: 428 VVCTNIMSRGIDVSSVKQTIIMEMSTDFPSYMHRIGRVGRDGCGG 472
>U58757-1|AAD47117.2| 620|Caenorhabditis elegans Dicer related
helicase protein 2 protein.
Length = 620
Score = 37.9 bits (84), Expect = 0.009
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = -3
Query: 782 KKEMKFCISSRKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKS 603
+K+M+ G ILV+T VA GLD+ VI ++Y + ++ R GR S
Sbjct: 335 QKQMEKLKMFADGENQILVSTSVAEEGLDIPECSLVIKYNYATNETAHVQRRGRARARNS 394
Query: 602 K 600
K
Sbjct: 395 K 395
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 37.5 bits (83), Expect = 0.011
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = -3
Query: 788 LNKKEMKFCISSRKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRS 609
L+K++ + + + L+AT V G+DV VI FD P Y+ GR R+
Sbjct: 438 LHKRQTEVLRRFHRNEINCLIATSVLEEGVDVKQCNLVIKFDRPLDMRSYVQSKGRARRA 497
Query: 608 KSK 600
S+
Sbjct: 498 GSR 500
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 36.7 bits (81), Expect = 0.020
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = -3
Query: 731 LVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRS 609
+V T++ ARG+DV +K+ I + + Y HRIGR S
Sbjct: 277 VVCTNILARGIDVSSVKHTIIMEMSADFDTYKHRIGRVSIS 317
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 35.9 bits (79), Expect = 0.034
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = -3
Query: 782 KKEMKFCISSRKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRS 609
+K+M+ G ILV+T VA GLDV VI ++Y + ++ R GR GR+
Sbjct: 753 QKQMEKLKMFADGEIRILVSTSVAEEGLDVPECSLVIKYNYATNEIAHVQRRGR-GRA 809
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 35.9 bits (79), Expect = 0.034
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = -3
Query: 782 KKEMKFCISSRKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRS 609
+K+M+ G ILV+T VA GLDV VI ++Y + ++ R GR GR+
Sbjct: 753 QKQMEKLKMFADGEIRILVSTSVAEEGLDVPECSLVIKYNYATNEIAHVQRRGR-GRA 809
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical protein
D2005.5 protein.
Length = 1119
Score = 35.5 bits (78), Expect = 0.045
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = -3
Query: 797 AIKLNKKEMKFCISS-RKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGR 621
A++ +E + + GR ++VAT V GLDV +I Y SS I + +
Sbjct: 808 AVQQTSQEQQLTLDKFNNGRLKVIVATSVVEEGLDVTACNLIIK--YNCSSGSAIQLVQQ 865
Query: 620 TGRSKSKGTSYAFFTPSNSRQAKDLVSVLQE 528
GR+++K + + +S + +++ E
Sbjct: 866 RGRARAKNSRSVLLSVKSSINETETNALISE 896
>AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical
protein Y67D2.6 protein.
Length = 732
Score = 31.1 bits (67), Expect = 0.98
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = -3
Query: 782 KKEMKFCISSRKGRASILVATDVAARGLDVDGIKYVINFDY 660
+++MK S+ G ++VAT++A + + GI YVI+ Y
Sbjct: 341 REQMKAFDSTPHGTRKVVVATNIAEASITIPGICYVIDTGY 381
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 29.5 bits (63), Expect = 3.0
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -3
Query: 746 GRASILVATDVAARGLDVDGIKYVIN 669
G+ +++AT++A L +DGI YV++
Sbjct: 806 GKRKVVIATNIAETSLTIDGIFYVVD 831
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 29.5 bits (63), Expect = 3.0
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -3
Query: 746 GRASILVATDVAARGLDVDGIKYVIN 669
G+ +++AT++A L +DGI YV++
Sbjct: 806 GKRKVVIATNIAETSLTIDGIFYVVD 831
>Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical
protein K08F4.1 protein.
Length = 850
Score = 28.3 bits (60), Expect = 6.9
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = -1
Query: 595 HHMLSLPLQIPVKPKIWYLFYKKLIRLLAHNCSRW 491
+++++LP+ + K W+LFY I+ + H+ W
Sbjct: 580 NYLVTLPIGVIRKASTWFLFYDD-IQKIVHSLQNW 613
>AF016683-8|AAM97998.1| 480|Caenorhabditis elegans Hypothetical
protein K09F6.10 protein.
Length = 480
Score = 28.3 bits (60), Expect = 6.9
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -3
Query: 764 CISSRKGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTG-RSKSKGTSY 588
C+ RKG+ L + + GLD D ++ FD D++H I G +S SK T+
Sbjct: 240 CLDHRKGKQLQLAKSLATSVGLDCDREEH--GFDDLQKIADHLHNICVWGLKSGSKATAK 297
Query: 587 AF 582
F
Sbjct: 298 IF 299
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,786,706
Number of Sequences: 27780
Number of extensions: 338496
Number of successful extensions: 872
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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