Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV1a22f
         (623 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    68   6e-14
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    24   1.2  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   2.7  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    23   2.7  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    22   4.8  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    22   4.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.3  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   6.3  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   8.4  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   8.4  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 68.1 bits (159), Expect = 6e-14
 Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
 Frame = +1

Query: 373 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQT 552
           EV V+G +   PI  FE +    ++ + VK  GY +PT IQ    P+ +SG++L+  AQT
Sbjct: 145 EVKVTGNDAPPPITSFETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSGRDLMSCAQT 204

Query: 553 GSGKTLAYILPAIVHI--NNQPP 615
           GSGKT A++LP I ++  +  PP
Sbjct: 205 GSGKTAAFMLPIIHNLLSDKNPP 227


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 27  VDPASERIHSLNKHLQLNPKN 89
           VDP SER+    + L++NP N
Sbjct: 511 VDPDSERMAFWQRILKINPNN 531


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 27  VDPASERIHSLNKHLQLNPKN 89
           VDP S+R+    + L++NP N
Sbjct: 511 VDPDSDRMAFWQRILKINPNN 531


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 27  VDPASERIHSLNKHLQLNPKN 89
           VDP S+R+    + L++NP N
Sbjct: 511 VDPDSDRMAFWQRILKINPNN 531


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/53 (18%), Positives = 24/53 (45%)
 Frame = -3

Query: 222 TKSSRSSKSIATVAKSRRIIAEFVASSKFGTTVSTAIIPVTRHDYFSDLVEDV 64
           T+  R+ +++++  ++   I        + TT++ A       DYF   ++ V
Sbjct: 93  TQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPV 145


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/53 (18%), Positives = 24/53 (45%)
 Frame = -3

Query: 222 TKSSRSSKSIATVAKSRRIIAEFVASSKFGTTVSTAIIPVTRHDYFSDLVEDV 64
           T+  R+ +++++  ++   I        + TT++ A       DYF   ++ V
Sbjct: 93  TQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPV 145


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -3

Query: 609  LVVYVHNGWQDVGQRFAGTRLGY 541
            L+V  H+ W D   +F     GY
Sbjct: 1442 LIVKAHDSWADFDNQFYKRVTGY 1464


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 117 AIIPVTRHDYFSDLVEDVYL 58
           A++PV +H     LV  VYL
Sbjct: 18  ALLPVKKHHRLEKLVPCVYL 37


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -3

Query: 120 TAIIPVTRHDYFSDLVEDVYLNYGFFLT 37
           T  IP    DY  DLV  + +N+   +T
Sbjct: 215 TTEIPPEPEDYVEDLVGHIEVNHSAPIT 242


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 181 QIEKNYRRICCLLQIWNH 128
           ++ KNY  IC L+  +N+
Sbjct: 221 RVRKNYNSICELVDAFNN 238


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.316    0.132    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,479
Number of Sequences: 336
Number of extensions: 3128
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)