Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV1a20f
         (587 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0MTA5 Cluster: HMG176; n=1; Helicoverpa armigera|Rep: ...    42   0.008
UniRef50_Q5PAN1 Cluster: Magnesium transporter; n=6; Anaplasmata...    37   0.30 
UniRef50_Q88F38 Cluster: Cation-transporting P-type ATPase; n=21...    32   8.6  
UniRef50_A4J310 Cluster: Putative uncharacterized protein precur...    32   8.6  

>UniRef50_Q0MTA5 Cluster: HMG176; n=1; Helicoverpa armigera|Rep:
           HMG176 - Helicoverpa armigera (Cotton bollworm)
           (Heliothis armigera)
          Length = 176

 Score = 42.3 bits (95), Expect = 0.008
 Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 1/115 (0%)
 Frame = +2

Query: 65  LFVLTAIVAVSTNEVADPRSTDRANALSIGSITSSDRLLRSFVVSRAATINW-RVLNVRF 241
           +F+   ++A        PRS      +S+G+I +SDRLL +   SR    N  + +NVR+
Sbjct: 55  VFITKVLLADEEMPFVAPRS-----GMSLGNIGASDRLLSASTHSRNPIANQVQTVNVRY 109

Query: 242 TAPXXXXXXXXXXXXSTQXXXXXXXXXXXXXXXXNLQFVNAPRRAFFFTVQIWGR 406
           T              S Q                 +Q  +A  R F + ++IWGR
Sbjct: 110 TGSSSIIILAVRAYGSGQGATARVVEGYLGRNSITIQLQSARGRGFHYRIEIWGR 164


>UniRef50_Q5PAN1 Cluster: Magnesium transporter; n=6;
           Anaplasmataceae|Rep: Magnesium transporter - Anaplasma
           marginale (strain St. Maries)
          Length = 483

 Score = 37.1 bits (82), Expect = 0.30
 Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
 Frame = -3

Query: 273 TALTRLPAGAVNLTLRTRQLIVAARLTTKLRKSLSLEVILPILKALALSVDLGSATSLVD 94
           T + RLP   VNL   +   IV    +  +R  ++L +I+P++ +++ +  L + T  + 
Sbjct: 315 TVVKRLPWLLVNLLTSSASSIVIGWFSETIRSFIALSIIMPMIASMSGNSGLQALTVTIR 374

Query: 93  T-ATIAVNTNNRANFILQEICTGTQN 19
             AT  +   N    + +E+C G  N
Sbjct: 375 ALATKQLTYRNSRRLLFKELCVGFVN 400


>UniRef50_Q88F38 Cluster: Cation-transporting P-type ATPase; n=21;
           Pseudomonadaceae|Rep: Cation-transporting P-type ATPase
           - Pseudomonas putida (strain KT2440)
          Length = 882

 Score = 32.3 bits (70), Expect = 8.6
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = -3

Query: 156 LPILKALALSVDLGSATSLVDTATIAVNTNNRANFILQ 43
           +P+L A  +S+ +GSAT L  T+  AV  +NR   ++Q
Sbjct: 759 VPVLAAADISIAMGSATDLAKTSADAVLLSNRLQALVQ 796


>UniRef50_A4J310 Cluster: Putative uncharacterized protein
           precursor; n=1; Desulfotomaculum reducens MI-1|Rep:
           Putative uncharacterized protein precursor -
           Desulfotomaculum reducens MI-1
          Length = 118

 Score = 32.3 bits (70), Expect = 8.6
 Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
 Frame = +2

Query: 47  KMKFALLFVLTAIVAVSTNEVADPRSTDRANAL-SIGSITSSDRLLRSFV 193
           K K  +LF + AI+A++T   ADP + D    L ++ + T +D++L+ F+
Sbjct: 6   KDKILILFSIMAILALATPCFADPANPDITTGLGNVDAKTLADKILKIFI 55


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 479,698,727
Number of Sequences: 1657284
Number of extensions: 7793747
Number of successful extensions: 18368
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18366
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 40658285374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)