Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV1a16r
(926 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 390 e-111
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 381 e-108
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 233 2e-63
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 174 1e-45
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 31 0.015
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 24 1.7
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 24 1.7
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 24 1.7
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 3.0
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 3.9
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 22 9.1
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 9.1
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 22 9.1
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 390 bits (961), Expect = e-111
Identities = 187/223 (83%), Positives = 197/223 (88%)
Frame = -3
Query: 924 KLTENASLKLLDAILPPARPTDKPPASFPCKTYTKXGGIGTVPVGRVETGVLKPGTIVVF 745
K+ ++ LDAILPP RPTDK P + K GGIGTVPVGRVETGVLKPG +V F
Sbjct: 222 KVEGKCLIEALDAILPPTRPTDKA-LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTF 280
Query: 744 APANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADF 565
APA +TTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADF
Sbjct: 281 APAGLTTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADF 340
Query: 564 TAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAA 385
TAQVIVLNHPGQISNGYTPVLDCHTAHIACKFA+IKEK DRR GK+TE NPKSIKSGDAA
Sbjct: 341 TAQVIVLNHPGQISNGYTPVLDCHTAHIACKFADIKEKCDRRNGKTTEENPKSIKSGDAA 400
Query: 384 IVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNF 256
IV LVPSKP+C E+FQEFPPLGRFAVRDMRQTVAVGVIKAV F
Sbjct: 401 IVMLVPSKPMCAEAFQEFPPLGRFAVRDMRQTVAVGVIKAVTF 443
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 381 bits (938), Expect = e-108
Identities = 180/216 (83%), Positives = 195/216 (90%)
Frame = -3
Query: 903 LKLLDAILPPARPTDKPPASFPCKTYTKXGGIGTVPVGRVETGVLKPGTIVVFAPANITT 724
++ LDAILPP+RPTDK P + K GGIGTVPVGRVETG+LKPG +V FAPA +TT
Sbjct: 229 IEALDAILPPSRPTDKA-LRLPLQDVYKIGGIGTVPVGRVETGILKPGMLVTFAPAALTT 287
Query: 723 EVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVL 544
EVKSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PP+GAADFTAQVIVL
Sbjct: 288 EVKSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVL 347
Query: 543 NHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPS 364
NHPGQISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE NPKSIKSGDAAIV L P+
Sbjct: 348 NHPGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPT 407
Query: 363 KPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNF 256
KP+CVE+FQEFPPLGRFAVRDMRQTVAVGVIK+V F
Sbjct: 408 KPMCVEAFQEFPPLGRFAVRDMRQTVAVGVIKSVTF 443
Score = 27.5 bits (58), Expect = 0.18
Identities = 18/34 (52%), Positives = 19/34 (55%)
Frame = -2
Query: 922 ADGKCLIEALGCHPATCPPH*QAPCVFPLQDVYK 821
ADGK LIEAL P +A PLQDVYK
Sbjct: 223 ADGKTLIEALDAILPPSRPTDKA-LRLPLQDVYK 255
Score = 21.8 bits (44), Expect = 9.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 665 LSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFN 772
L PG A ++T++ SV M A T +PG N
Sbjct: 272 LKPGMLVTFAPAALTTEVKSVEMHHEALTEALPGDN 307
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 233 bits (569), Expect = 2e-63
Identities = 108/119 (90%), Positives = 113/119 (94%)
Frame = -3
Query: 717 KSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNH 538
KSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PP+GAADFTAQVIVLNH
Sbjct: 1 KSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNH 60
Query: 537 PGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSK 361
PGQISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE NPKSIKSGDAAIV L P+K
Sbjct: 61 PGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTK 119
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 174 bits (423), Expect = 1e-45
Identities = 85/111 (76%), Positives = 91/111 (81%)
Frame = -3
Query: 924 KLTENASLKLLDAILPPARPTDKPPASFPCKTYTKXGGIGTVPVGRVETGVLKPGTIVVF 745
K+ ++ LDAILPP RPTDK P + K GGIGTVPVGRVETGVLKPG +V F
Sbjct: 165 KVEGKCLIEALDAILPPTRPTDKA-LRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTF 223
Query: 744 APANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 592
APA +TTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN
Sbjct: 224 APAGLTTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 274
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 31.1 bits (67), Expect = 0.015
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -3
Query: 924 KLTENASLKLLDAILPPARPTDK 856
K+ ++ LDAILPP RPTDK
Sbjct: 149 KVEGKCLIEALDAILPPTRPTDK 171
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 24.2 bits (50), Expect = 1.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 149 KYRSCMKNCAVNSSSYFLPLVAFS 220
K+ C+KN A SSYF+ + F+
Sbjct: 94 KFYDCLKNSADTISSYFVGKMYFN 117
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 24.2 bits (50), Expect = 1.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 149 KYRSCMKNCAVNSSSYFLPLVAFS 220
K+ C+KN A SSYF+ + F+
Sbjct: 99 KFYDCLKNSADTISSYFVGKMYFN 122
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 24.2 bits (50), Expect = 1.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 149 KYRSCMKNCAVNSSSYFLPLVAFS 220
K+ C+KN A SSYF+ + F+
Sbjct: 99 KFYDCLKNSADTISSYFVGKMYFN 122
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.4 bits (48), Expect = 3.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 110 CSPFFLRNTFR*MKYRSCMKN 172
C FF R+ + ++YR C KN
Sbjct: 87 CKGFFRRSIQQKIQYRPCTKN 107
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.0 bits (47), Expect = 3.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 639 SVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPG 532
S ++LR ++A + + PKG Q++VLN G
Sbjct: 283 STRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAG 318
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 21.8 bits (44), Expect = 9.1
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -2
Query: 520 RLHTSLGLPHCPHC 479
RLHT HC HC
Sbjct: 30 RLHTGEKPYHCSHC 43
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.8 bits (44), Expect = 9.1
Identities = 18/63 (28%), Positives = 24/63 (38%)
Frame = +1
Query: 436 STTVNFFFDFCKFAGNVGSVAIQDWCVTV*DLTRMVKHNDLSCKICSTLRWVVFGVTSNI 615
ST+ N F K G G + CVT R HN + + C V + N+
Sbjct: 77 STSENKTFPTIKIVGYKGRALVVVSCVTKDQPYRPHPHNLVGKEACKQGVCTVEVSSENM 136
Query: 616 TTT 624
T T
Sbjct: 137 TVT 139
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.8 bits (44), Expect = 9.1
Identities = 18/63 (28%), Positives = 24/63 (38%)
Frame = +1
Query: 436 STTVNFFFDFCKFAGNVGSVAIQDWCVTV*DLTRMVKHNDLSCKICSTLRWVVFGVTSNI 615
ST+ N F K G G + CVT R HN + + C V + N+
Sbjct: 77 STSENKTFPTIKIVGYKGRALVVVSCVTKDQPYRPHPHNLVGKEACKQGVCTVEVSSENM 136
Query: 616 TTT 624
T T
Sbjct: 137 TVT 139
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 262,957
Number of Sequences: 438
Number of extensions: 5787
Number of successful extensions: 27
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30234750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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