Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV1a08f
(721 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 25 0.72
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 25 0.72
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 24 1.7
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 24 1.7
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 24 1.7
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 24 1.7
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 24 1.7
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 24 1.7
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 24 1.7
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 23 2.9
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 23 3.8
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 3.8
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 22 5.1
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 5.1
AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase prec... 22 5.1
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 22 6.7
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 8.9
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 8.9
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 25.0 bits (52), Expect = 0.72
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 572 RKTSKNIIYYLLPATSSAW 516
+KT NI YYLL A + W
Sbjct: 189 KKTYNNIDYYLLAANYTGW 207
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 25.0 bits (52), Expect = 0.72
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 572 RKTSKNIIYYLLPATSSAW 516
+KT NI YYLL A + W
Sbjct: 189 KKTYNNIDYYLLAANYTGW 207
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.8 bits (49), Expect = 1.7
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +2
Query: 218 NISKISSSDLDVXKTIREVNPFEQKKKNYQNRFKHSREI 334
NIS S D + E N + + + + R +H RE+
Sbjct: 4 NISNYSHHDEKFKQLRNEDNKIDLRSRTKEERLQHRREV 42
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 1.7
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +2
Query: 218 NISKISSSDLDVXKTIREVNPFEQKKKNYQNRFKHSREI 334
NIS S D + E N + + + + R +H RE+
Sbjct: 4 NISNYSHHDEKFKQLRNEDNKIDLRSRTKEERLQHRREV 42
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.8 bits (49), Expect = 1.7
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +2
Query: 218 NISKISSSDLDVXKTIREVNPFEQKKKNYQNRFKHSREI 334
NIS S D + E N + + + + R +H RE+
Sbjct: 4 NISNYSHHDEKFKQLRNEDNKIDLRSRTKEERLQHRREV 42
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.8 bits (49), Expect = 1.7
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +2
Query: 218 NISKISSSDLDVXKTIREVNPFEQKKKNYQNRFKHSREI 334
NIS S D + E N + + + + R +H RE+
Sbjct: 4 NISNYSHHDEKFKQLRNEDNKIDLRSRTKEERLQHRREV 42
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.8 bits (49), Expect = 1.7
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +2
Query: 218 NISKISSSDLDVXKTIREVNPFEQKKKNYQNRFKHSREI 334
NIS S D + E N + + + + R +H RE+
Sbjct: 4 NISNYSHHDEKFKQLRNEDNKIDLRSRTKEERLQHRREV 42
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.8 bits (49), Expect = 1.7
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +2
Query: 218 NISKISSSDLDVXKTIREVNPFEQKKKNYQNRFKHSREI 334
NIS S D + E N + + + + R +H RE+
Sbjct: 4 NISNYSHHDEKFKQLRNEDNKIDLRSRTKEERLQHRREV 42
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.8 bits (49), Expect = 1.7
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +2
Query: 218 NISKISSSDLDVXKTIREVNPFEQKKKNYQNRFKHSREI 334
NIS S D + E N + + + + R +H RE+
Sbjct: 4 NISNYSHHDEKFKQLRNEDNKIDLRSRTKEERLQHRREV 42
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -3
Query: 503 GITLNFTHLFIYVESENIFE 444
GI ++ H+F YV+ ++I E
Sbjct: 496 GILMDAPHIFEYVDQDHIIE 515
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.6 bits (46), Expect = 3.8
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +2
Query: 218 NISKISSSDLDVXKTIREVNPFEQKKKNYQNRFKHSRE 331
NIS S D + E N + + + + R +H RE
Sbjct: 4 NISSYSHHDEKFKQLRNEDNEIDLRSRTKEERLQHRRE 41
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.6 bits (46), Expect = 3.8
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +2
Query: 218 NISKISSSDLDVXKTIREVNPFEQKKKNYQNRFKHSRE 331
NIS S D + E N + + + + R +H RE
Sbjct: 4 NISNYSHHDEKFKQLRNEDNKIDLRSRTKEERLQHRRE 41
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 22.2 bits (45), Expect = 5.1
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = -3
Query: 569 KTSKNIIYYLLPATSSAWNSYFGITLNFTHLFIY 468
KTS Y++PA S W Y N + IY
Sbjct: 191 KTSGKYKEYIIPANYSGW--YLNHDYNLENKLIY 222
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 22.2 bits (45), Expect = 5.1
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +2
Query: 218 NISKISSSDLDVXKTIREVNPFEQKKKNYQNRFKHSRE 331
NIS S D + E N + + + + R +H RE
Sbjct: 4 NISNYSYHDEKFKQLRNEDNKIDLRSRTKEERLQHRRE 41
>AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase
precursor protein.
Length = 156
Score = 22.2 bits (45), Expect = 5.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 370 NSTIIFYLCXFTDFS 326
NSTIIF L F FS
Sbjct: 131 NSTIIFLLIRFKSFS 145
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.8 bits (44), Expect = 6.7
Identities = 10/39 (25%), Positives = 18/39 (46%)
Frame = +2
Query: 218 NISKISSSDLDVXKTIREVNPFEQKKKNYQNRFKHSREI 334
NIS S D + E + + + + + R +H RE+
Sbjct: 4 NISNYSHHDEKFKQLRNEDSKIDLRSRTKEERLQHRREV 42
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.4 bits (43), Expect = 8.9
Identities = 16/76 (21%), Positives = 28/76 (36%), Gaps = 3/76 (3%)
Frame = -3
Query: 569 KTSKNIIYYLLPATSSAW--NSYFGITLNFTHLFIYVESENIFE**NVKELFKVPKSRF- 399
KTS Y++PA S W N + + + + + F +P +
Sbjct: 191 KTSGKYKEYIIPANYSGWYLNHDYNLENKLNYFIEDIGLNTYYFFLRQAFPFWLPSKEYD 250
Query: 398 LTDFKSGSYQFDHNFL 351
L D++ Y + H L
Sbjct: 251 LPDYRGEEYLYSHKLL 266
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.4 bits (43), Expect = 8.9
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 129 IPVQINTLFITILK 170
I V+ NT+FI ILK
Sbjct: 332 ISVESNTMFINILK 345
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,282
Number of Sequences: 438
Number of extensions: 4212
Number of successful extensions: 36
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -